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429 results for “December”
NEXUS file describing the taxonomic relationships of the 466 species for which genome sequencing was underway at Tree of Life, Wellcome Sanger Institute, at 31 December 2020
<p>This NEXUS file shows the taxonomic relationships of 466 species of eukaryote. The taxonomy derives from the NCBI TaxonomyDB. The species are those for which genome sequencing is underway at the Tree of Life programme, Wellcome Sanger Institute, as of 31st Decemnber 2020. The NEXUS file includes a figtree block generated in FigTree [<strong><a href="https://github.com/rambaut/figtree">https://github.com/rambaut/figtree</a>] </strong>that informs display of the data as a circular tree with species coloured by taxonomic Family, and Families with more than one species represented as triangles. The figure is used in publications and presentations describing the activities of the Tree of Life programme and the projects in which Tree of Life is involved, especially the Darwin Tree of Life project [https://darwintreeoflife.org].</p>
Cumulative PLOS ALM Report - December 2015
Article-Level Metrics (ALM) measure the reach and online engagement of scholarly works. This PLOS ALM report contains the cumulative stats collected for all works through December 10, 2015. Data are generated by the Lagotto open source software. Go to the Lagotto forum for questions or comments.
#CdnPoli Tweet IDs for 29 December 2016
<p>These are the #CdnPoli TweetIDs for 29 December 2016, collected on 29 December 2016. They were collected using the DocNow project, available at http://docnow.io/. </p>
Figure 1. from Additional moults into 'elongatus' males in laboratory-reared Polydesmus angustus Latzel, 1884 (Diplopoda, Polydesmida, Polydesmidae) – implications for taxonomy - ZooKeys 156: 41-48 (20 December 2011) https://doi.org/10.3897/zookeys.156.2045
Figure 1. - Dorsal view of a Polydesmus angustus male of stadium IX after its death at the age of 19 months. The trunk consists of 19 podous rings – bearing 32 pairs of legs plus regressed gonopods (8th leg-pair) – and one apodous ring anterior to the telson.
Figure 6. from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Figure 6. - Strobe models of five positions along the canonical variates indicated in Fig. 5. CV-1, CV-2, and CV-3 axes account for 79.5% of the observed between-species shape variation. Landmarks and semi-landmarks are superimposed in the figure to the right of each sequence to express the magnitudes and directions (arrows) of shape trends. In all models, the mesial margin of the coxa is depicted to the left, the lateral margin to the right.
Supplementary material 1: Appendix from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Voucher data for specimens use din morphometric analyses and supplementary figures of Canonical Variates scatterplots
Figure 5. from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Figure 5. - Results of the CVA of coxal shape data for all eight species, showing the subspaces formed by the first three discriminant axes, which together account for more than 79% of observed between-group shape variation. Within each subspace plot the black circles represent the coordinate locations for each of the five along-axis shape models depicted in Fig. 6.
Figure 4. from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Figure 4. - Scatterplots of Procrustes PCA scores for coxal shape data. The first two shape variation axes (top) together account for 62.63% of the observed shape variation; PC-2 and PC-3 axes (bottom) together account for 27.58% of the observed shape variation.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 6. Centroids of triangles in Figure 5. Co-occurrences of Tasmaniosoma compitale and Tasmaniosoma hickmanorum males are circled. Arrow points to area shown in Figure 8. Scale bar = 25 km.
Supplementary material 1: Parapatry_records from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
ZIP archive contains: 1. All currently known locality records for the parapatric millipedes Tasmaniosoma compitale and T. hickmanorum, in spreadsheet (CSV) format. 2. 4 KML files giving localities for (1) males of Tasmaniosoma compitale and T. hickmanorum, (2) females of these species, (3) cooccurrences of these species (4) unidentified females of these species. KML annotation gives museum registration number for specimen lot.
Figure 3. from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Figure 3. - Thereuopoda longicornis scatterplot of coxal shape data along the discriminant subspace formed by the first two CV axes, which together account for 74.17% of observed between-group shape variation.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 1. Localities for male Tasmaniosoma hickmanorum. Scale bar = 100 km. Rectangle indicates map extent in Figs 2–6.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 5. Edited Delaunay triangulation of localities for male Tasmaniosoma compitale (filled circles), Tasmaniosoma hickmanorum (open circles) and co-occurrences (stars); see text for explanation. Scale bar = 25 km.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 2. Localities for Tasmaniosoma hickmanorum males (filled squares) and females identified by colour (open squares). Ellipse encloses Arthur-Hellyer 'island' (see text for explanation). Scale bar = 25 km.
Figure 2. from Detecting taxonomic signal in an under-utilised character system: geometric morphometrics of the forcipular coxae of Scutigeromorpha (Chilopoda) - ZooKeys 156: 49-66 (20 December 2011) https://doi.org/10.3897/zookeys.156.1997
Figure 2. - Landmarks (L1-L10) used in morphometric analysis. Diagonal line to L1 is the longest line from anterolateral to posteromedial corners of the coxa. Spine-bristles numbered 1-4 (blue) from interior to exterior. Throughout text, left and right coxae refer to dorsal orientation (inverted 180° relative to this ventral view).
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 4. Delaunay triangulation of localities for male Tasmaniosoma compitale (filled circles), Tasmaniosoma hickmanorum (open circles) and co-occurrences (stars). The set of localities used has been trimmed to the vicinity of the parapatric boundary, and Tasmaniosoma hickmanorum localities in the Arthur-Hellyer 'island' and Tasmaniosoma compitale localities at the Vale of Belvoir have been excluded. Scale bar = 25 km.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 7C, D. Centroids from Fig. 6 superimposed on simplified bedrock geology C and mean annual rainfall isohyets, in mm D. In C, colours crossed by main parapatric boundary represent (anticlockwise from top left) Quaternary coastal sand and gravel (gray-blue), Precambrian siltstone and mudstone (orange), Precambrian metamorphics (green), Cambrian conglomerate and siltstone (gray-green), Tertiary basalt (light brown) and Permian glaciomarine sedimentary rocks (red-brown). Scale bars = 25 km.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 3. Localities for Tasmaniosoma compitale males (filled squares) and females identified by colour (open squares). Outliers (circled) are at the Vale of Belvoir. Scale bar = 25 km.
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 8. Rebecca Spur 3 area (marked with arrow in Fig. 6) in Google Earth image dated 11 October 2010. Markers: Tasmaniosoma compitale males (darker green) and females identified by colour (lighter green), Tasmaniosoma hickmanorum males (darker red) and females identified by colour (lighter red), and possible co-occurrence of females identified by colour (yellow).
from A remarkable case of mosaic parapatry in millipedes - ZooKeys 156: 71-84 (20 December 2011) https://doi.org/10.3897/zookeys.156.1893
- Figure 7A, B. Centroids from Fig. 6 superimposed on 100 m elevation contours A and principal rivers B. Scale bars = 25 km.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.