Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
130
datasets available to search
ShareScore release 0.9.0
Dataset results
130 results for “Human microbiome”
Perturbation of the metabolic phenotypes of vaccination by the gut microbiome in humans [phase II]
GEO Series GSE120718. Homo sapiens. 54 samples. Type: Expression profiling by array.
Diet-induced modifications to human microbiome reshape colonic homeostasis in irritable bowel syndrome (16S)
GEO Series GSE215047. human gut metagenome. 29 samples. Type: Other.
Dual-transcriptomic analysis of human nasal transcriptome and microbiome reveals host-bacteria interactions associated with symptomatic respiratory infection [RNA-Seq]
GEO Series GSE309130. Homo sapiens. 149 samples. Type: Expression profiling by high throughput sequencing.
Dual-transcriptomic analysis of human nasal transcriptome and microbiome reveals host-bacteria interactions associated with symptomatic respiratory infection (16S validation)
GEO Series GSE309134. Homo sapiens. 53 samples. Type: Other.
Transcriptome Analysis of Human Supragingival Dental Plaque Microbiome from 19 Twin Pairs with and without Dental Caries
GEO Series GSE31439. human oral metagenome. 38 samples. Type: Expression profiling by high throughput sequencing.
Multimodal immune cell phenotyping in gastrointestinal biopsies reveals microbiome-related T cell modulations in human GvHD patients
GEO Series GSE234357. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Dual-transcriptomic analysis of human nasal transcriptome and microbiome reveals host-bacteria interactions associated with symptomatic respiratory infection
GEO Series GSE309135. Homo sapiens. 202 samples. Type: Expression profiling by high throughput sequencing; Other.
Social Networks, Cooperative Breeding, and the Human Milk Microbiome: data release
<p>Social Networks, Cooperative Breeding, and the Human Milk Microbiome</p>
An Expanded Reference Map of the Human Gut Microbiome Reveals Hundreds of Previously Unknown Species
<p><strong>150k MAG assemblies created from 50k samples by single-end short read assembly, used in the process of creating an expanded reference map of the human gut microbiome.</strong></p>
Activity of bacteriocins against Clostridioides difficile in a Simplified Human Intestinal Microbiome
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.