Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
233
datasets available to search
ShareScore release 0.9.0
Dataset results
233 results for “Long-read”
High resolution annotation of Zebrafish transcriptome using long-read sequencing
GEO Series GSE101843. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Long-read transcriptomic sequencing of Plasmodium falciparum malaria parasite reveals isoforms with alternative 5′ ends
GEO Series GSE186109. Plasmodium falciparum 3D7. 8 samples. Type: Other.
Accurate isoform quantification by joint short- and long-read RNA-sequencing [short reads]
GEO Series GSE271528. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Long-read Ribo-STAMP simultaneously measures transcription and translation at full length isoform resolution
GEO Series GSE255844. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Long-read Nanopore sequencing of mouse neural stem cells
GEO Series GSE151841. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
A nanopore long-read transcriptome in pancreatic cancer cells
GEO Series GSE293661. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Total RNA-seq and long-read RNAseq (Nanopore) upon Son KD in mouse embryonic stem cells
GEO Series GSE271659. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Long-read sequencing-based analyses of the adult Drosophila brain transcriptome in physiological and pathological settings
GEO Series GSE305884. Drosophila melanogaster. 12 samples. Type: Expression profiling by high throughput sequencing.
LocusMasterTE: long-read assisted short-read RNA-seq TE quantification [long]
GEO Series GSE225377. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order structures within individual cells
GEO Series GSE217189. Homo sapiens; Mus musculus. 16 samples. Type: Other.
LocusMasterTE: long-read assisted short-read TE quantification [short]
GEO Series GSE225380. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome
GEO Series GSE160383. Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing.
Set4: ERCC bulk Loop-seq long-read RNA-seq by Illumina NovaSeq platform
GEO Series GSE246835. synthetic construct. 2 samples. Type: Other.
Comprehensive long-read transcriptomic analysis reveals multi-level transcriptional alterations mediated by miR-214-3p dysregulation in gastric cancer cells
GEO Series GSE300926. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Set3: ERCC bulk Loop-seq long-read RNA-seq by Element Biosciences AVITI platform
GEO Series GSE246834. synthetic construct. 2 samples. Type: Other.
Gene expression of the 182 Danish ash accessions (Harper et al., 2016, ENA PRJEB10202) using the new long-read F.excelsior genome (PRJNA865134, SAMN30100368)
GEO Series GSE214551. Fraxinus excelsior. 182 samples. Type: Expression profiling by high throughput sequencing.
Long-read transcriptome profiling of the rat hippocampal neurons in primary culture at different time points after activation using Nanopore sequencing
GEO Series GSE218694. Rattus norvegicus. 20 samples. Type: Expression profiling by high throughput sequencing.
Cataloging human PRDM9 variability utilizing long-read sequencing technologies reveals PRDM9 population-specificity and two distinct groupings of related alleles
GEO Series GSE166483. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
High throughput single cell long-read sequencing analyses of same-cell genotypes and phenotypes in human tumors.
GEO Series GSE212945. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Long-read sequencing disentangles isoform complexity at allele-specific loci
GEO Series GSE246857. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.