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840
datasets available to search
ShareScore release 0.9.0
Dataset results
840 results for “RNA modeling”
Single cell RNA-seq shows cellular heterogeneity and lineage expansion in a mouse model of SHH-driven medulloblastoma support resistance to SHH inhibitor therapy
GEO Series GSE129730. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
A Budding Yeast Model for Human Disease Mutations in the EXOSC2 Cap Subunit of the RNA Exosome
GEO Series GSE163106. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing.
Global mapping of RNA-chromatin contacts reveals a proximity-dominated connectivity model for ncRNA-gene interactions
GEO Series GSE240435. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Modeling Preeclampsia using human induced pluripotent stem cells [RNA-seq]
GEO Series GSE159437. Homo sapiens. 72 samples. Type: Expression profiling by high throughput sequencing.
Fibroblasts as an in vitro model of circadian genetic and genomic studies: A temporal analysis (RNA-Seq)
GEO Series GSE263713. Homo sapiens. 78 samples. Type: Expression profiling by high throughput sequencing.
Improved RNA stability estimation through Bayesian modeling reveals most bacterial transcripts have sub-minute half-lives [RIF-seq]
GEO Series GSE234009. Salmonella enterica subsp. enterica serovar Typhimurium. 120 samples. Type: Expression profiling by high throughput sequencing.
Orthotopic CRC organoid transplantation in mice: A novel model for the study and treatment of peritoneal carcinomatosis [Bulk RNA-Seq]
GEO Series GSE202454. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (RNA-Seq)
GEO Series GSE48993. Bacteria; Bacteroides cellulosilyticus. 116 samples. Type: Expression profiling by high throughput sequencing.
RNA-Targeting CRISPR/CasRx System Relieves Disease Symptoms in Huntington's Disease Models
GEO Series GSE248873. Sus scrofa; Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Efficacy of BET protein proteolysis targeted chimera-based combinations against novel patient-derived models of Richter Transformation-Diffuse Large B-Cell Lymphoma [RNA-Seq]
GEO Series GSE154462. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide modelling of transcription kinetics reveals patterns of RNA processing delays
GEO Series GSE62789. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
RNA-sequencing of NR2F2-isoform 2 melanoma cellular models
GEO Series GSE102553. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Quality assessment and control of tissue specific RNA-seq libraries of Drosophila transgenic RNAi models
GEO Series GSE54724. Drosophila melanogaster. 17 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic and transcriptional landscapes during cerebral cortex development in a microcephaly mouse model [RNA-seq]
GEO Series GSE215228. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of post-traumatic osteoarthritis mouse models identifies miR-199a-5p as a regulator of abnormal mechanical loading in articular cartilage (RNA-Seq)
GEO Series GSE232206. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Modeling human telencephalic development and autism-associated SHANK3 deficiency using organoids generated from single neural rosettes [bulk RNA-seq2]
GEO Series GSE211878. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Human branching cholangiocyte organoids recapitulate embryogenic bile duct development and provide an unique model to study biliary diseases. RNA-Seq
GEO Series GSE179599. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Multi-influential interactions controls behaviour and cognition through a limited number of pathways in Down syndrome mouse models (RNA-Seq reanalysis I)
GEO Series GSE149467. Homo sapiens. 0 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
A novel neural stem cell-derived immunocompetent mouse model of glioblastoma for preclinical studies (RNA-Seq)
GEO Series GSE145557. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Generation of matched patient-derived xenograft in vitro-in vivo models using 3D macroporous hydrogels for the study of liver cancer [RNA-seq]
GEO Series GSE109903. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.