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9,113 results for “Sampling”

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edi52/100

Fall 2015 plant monitoring survey -- biomass calculated from shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

The biomass of plants surveyed in permanent plots at 10 GCE LTER sampling sites in October 2015 was estimated based on allometric relationships between biomass and shoot height and flowering status derived for each site, zone, and species in October 2002 and October 2008. Biomass was calculated for dominant species, including Spartina alterniflora, S. cynosuroides, Juncus roemerianus, and Zizaniopsis miliacea, as well as rarer species including Scirpus spp, Panicum spp. and Typha angustifolia. This data set is based on GCE plant monitoring survey data set PLT-GCEM-1511a, and allometric relationships were based on GCE data sets PLT-GCEM-0211b, PLT-GCEM-0711, and PLT-GCEM-2011.

openCC (other)May 2021View details →
edi52/100

Anchor sampling of inorganic carbon (DIC) and dissolved oxygen (DO) at the flux tower tidal creek in the Duplin River

An anchor sampling of DIC and DO level at the mouth of a first order creek of the Duplin was conducted seasonally in order to estimate the metabolism and CO2/O2 dynamics of water when it floods the marsh where the GCE LTER project operates an eddy covariance tower.

openCustomJan 2020View details →
edi52/100

Fall 2016 plant monitoring survey -- shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

A quadrat survey was conducted in October 2016 to measure the species and size distribution of plants at 10 GCE LTER sampling sites. The quadrats were established as permanent plots at GCE sampling sites in October 2000 by placing wooden stakes at random locations across two nominal zones at each site, designated based on marsh structure (creekbank and high marsh). New plots were added each year as necessary to replace those lost due to catastrophic wrack disturbance or creek bank erosion. The plots were visually surveyed and the species, shoot height, and flowering status was recorded individually for each shoot over 10 cm in height present in each plot. Observations from plots exhibiting signs of disturbance were noted in a separate data set (PLT-GCEM-1801). This survey will be repeated annually to assess changes in plant distribution and biomass in relation to environmental changes documented by other GCE LTER monitoring efforts.

openCC (other)May 2021View details →
edi52/100

Fall 2016 plant monitoring survey -- biomass calculated from shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

The biomass of plants surveyed in permanent plots at 10 GCE LTER sampling sites in October 2016 was estimated based on allometric relationships between biomass and shoot height and flowering status derived for each site, zone, and species in October 2002 and October 2008. Biomass was calculated for dominant species, including Spartina alterniflora, S. cynosuroides, Juncus roemerianus, and Zizaniopsis miliacea, as well as rarer species including Scirpus spp, Panicum spp. and Typha angustifolia. This data set is based on GCE plant monitoring survey data set PLT-GCEM-1611a, and allometric relationships were based on GCE data sets PLT-GCEM-0211b, PLT-GCEM-0711, and PLT-GCEM-2011.

openCC (other)May 2021View details →
edi52/100

Fall 2017 plant monitoring survey -- shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

A quadrat survey was conducted in October 2017 to measure the species and size distribution of plants at 10 GCE LTER sampling sites. The quadrats were established as permanent plots at GCE sampling sites in October 2000 by placing wooden stakes at random locations across two nominal zones at each site, designated based on marsh structure (creekbank and high marsh). New plots were added each year as necessary to replace those lost due to catastrophic wrack disturbance or creek bank erosion. The plots were visually surveyed and the species, shoot height, and flowering status was recorded individually for each shoot over 10 cm in height present in each plot. Observations from plots exhibiting signs of disturbance were noted in a separate data set (PLT-GCEM-1801). This survey will be repeated annually to assess changes in plant distribution and biomass in relation to environmental changes documented by other GCE LTER monitoring efforts.

openCC (other)May 2021View details →
edi52/100

Fall 2017 plant monitoring survey -- biomass calculated from shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

The biomass of plants surveyed in permanent plots at 10 GCE LTER sampling sites in October 2017 was estimated based on allometric relationships between biomass and shoot height and flowering status derived for each site, zone, and species in October 2002 and October 2008. Biomass was calculated for dominant species, including Spartina alterniflora, S. cynosuroides, Juncus roemerianus, and Zizaniopsis miliacea, as well as rarer species including Scirpus spp, Panicum spp. And Typha angustifolia. This data set is based on GCE plant monitoring survey data set PLT-GCEM-1711a, and allometric relationships were based on GCE data sets PLT-GCEM-0211b, PLT-GCEM-0711, and PLT-GCEM-2011.

openCC (other)May 2021View details →
edi52/100

Fall 2018 plant monitoring survey -- shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

A quadrat survey was conducted in October 2018 to measure the species and size distribution of plants at 10 GCE LTER sampling sites. The quadrats were established as permanent plots at GCE sampling sites in October 2000 by placing wooden stakes at random locations across two nominal zones at each site, designated based on marsh structure (creekbank and high marsh). New plots were added each year as necessary to replace those lost due to catastrophic wrack disturbance or creek bank erosion. The plots were visually surveyed and the species, shoot height, and flowering status was recorded individually for each shoot over 10 cm in height present in each plot. Observations from plots exhibiting signs of disturbance were noted in a separate data set (PLT-GCEM-1801). This survey will be repeated annually to assess changes in plant distribution and biomass in relation to environmental changes documented by other GCE LTER monitoring efforts.

openCC (other)May 2021View details →
edi52/100

Fall 2018 plant monitoring survey -- biomass calculated from shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

The biomass of plants surveyed in permanent plots at 10 GCE LTER sampling sites in October 2018 was estimated based on allometric relationships between biomass and shoot height and flowering status derived for each site, zone, and species in October 2002 and October 2008. Biomass was calculated for dominant species, including Spartina alterniflora, S. cynosuroides, Juncus roemerianus, and Zizaniopsis miliacea, as well as rarer species including Scirpus spp, Panicum spp. And Typha angustifolia. This data set is based on GCE plant monitoring survey data set PLT-GCEM-1811a, and allometric relationships were based on GCE data sets PLT-GCEM-0211b, PLT-GCEM-0711, and PLT-GCEM-2011.

openCC (other)May 2021View details →
edi52/100

Fall 2019 plant monitoring survey -- shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

A quadrat survey was conducted in October 2019 to measure the species and size distribution of plants at 10 GCE LTER sampling sites. The quadrats were established as permanent plots at GCE sampling sites in October 2000 by placing wooden stakes at random locations across two nominal zones at each site, designated based on marsh structure (creekbank and high marsh). New plots were added each year as necessary to replace those lost due to catastrophic wrack disturbance or creek bank erosion. The plots were visually surveyed and the species, shoot height, and flowering status was recorded individually for each shoot over 10 cm in height present in each plot. Observations from plots exhibiting signs of disturbance were noted in a separate data set (PLT-GCEM-1801). This survey will be repeated annually to assess changes in plant distribution and biomass in relation to environmental changes documented by other GCE LTER monitoring efforts.

openCC (other)May 2021View details →
edi52/100

Fall 2019 plant monitoring survey -- biomass calculated from shoot height and flowering status of plants in permanent plots at GCE sampling sites 1-10

The biomass of plants surveyed in permanent plots at 10 GCE LTER sampling sites in October 2019 was estimated based on allometric relationships between biomass and shoot height and flowering status derived for each site, zone, and species in October 2002 and October 2008. Biomass was calculated for dominant species, including Spartina alterniflora, S. cynosuroides, Juncus roemerianus, and Zizaniopsis miliacea, as well as rarer species including Scirpus spp, Panicum spp. And Typha angustifolia. This data set is based on GCE plant monitoring survey data set PLT-GCEM-1911a, and allometric relationships were based on GCE data sets PLT-GCEM-0211b, PLT-GCEM-0711, and PLT-GCEM-2011.

openCC (other)May 2021View details →
edi52/100

Fall 2020 grasshopper monitoring -- mid-marsh grasshopper abundance and species diversity at eight GCE LTER sampling sites

Grasshopper abundance and species diversity were investigated at eight sampling sites within the Georgia Coastal Ecosystems (GCE) LTER study area in July 2020. Visual surveys were conducted along 8 2m by 10m transects randomly allocated within the mid-marsh zone at each site. All grasshoppers observed within each transect were counted and identified to species, if possible. This survey was conducted as part of the GCE invertebrate monitoring program, and will be performed annually to assess long-term changes in relative species abundances across the GCE study area.

openCC (other)Jan 2022View details →
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Fall 2021 grasshopper monitoring -- mid-marsh grasshopper abundance and species diversity at eight GCE LTER sampling sites

Grasshopper abundance and species diversity were investigated at eight sampling sites within the Georgia Coastal Ecosystems (GCE) LTER study area in August 2021. Visual surveys were conducted along 8 2m by 10m transects randomly allocated within the mid-marsh zone at each site. All grasshoppers observed within each transect were counted and identified to species, if possible. This survey was conducted as part of the GCE invertebrate monitoring program, and will be performed annually to assess long-term changes in relative species abundances across the GCE study area.

openCC (other)Oct 2022View details →
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Carbon exchange responses of rehydrated and incubated biological soil crust samples from White Sands National Park in 2020-2022

This dataset contains photosynthetic light response data from biological soil crusts collected from a gypsum sand sheet at White Sands National Park, NM, USA in three different seasons. This study aims to 1) assess the carbon fixation capacity of biocrust types; 2) assess biocrust carbon fixation response under varying incubation times; 3) and understand variability in carbon fixation response in different seasons. Sample collection occurred in July 2020 (summer), September 2021 (fall), and March 2022 (winter). The biocrust types of interest were light cyanobacterial, dark cyanobacterial, Peltula lichen, Clavascidium lichen, and moss crusts. Samples were collected with the intention of taking carbon fixation measurements after different incubation periods (30 min, 2 hr, 6 hr, 12hr, or 24 hr in 2020, and 30 min, 2 hr, 6 hr, 12hr, 24 hr, or 36 hr in 2021 and 2022). For each condition (biocrust type and incubation time) there were five replicates in 2020 (total n=125) and ten replicates in 2021 and 2022 (total n=300). After collection, the intact samples were re-wetted and subjected to their respective incubation period and measured for photosynthetic response. The resulting light response curves and photosynthetic information was be used for comparing biocrust type, incubation time response differences, and seasonal variation to understand variability of biocrust carbon flux response at a single site. This data set includes the light response curve values and photosynthetic data calculated from these curves and raw LICOR output files compiled into 3 spreadsheet files. The included 2020 data is also associated with the White Sands National Park data from Jornada Study 549. This dataset accompanies the in-press article by Hoellrich et al. (2023) cited below, and the study is now complete. Hoellrich, Mikaela R., Darren K. James, David Bustos, Anthony Darrouzet-Nardi, Louis S. Santiago, and Nicole Pietrasiak. "Biocrust carbon exchange varies with crust type and time on Ch

openCC (other)Apr 2023View details →
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Aeolian dust weights sampled by BSNE collectors before and after the windy season from the NEAT study at Jornada Basin LTER, 2008-ongoing

This data package contains weights of windblown dust collected by BSNE collectors at long-term vegetation-removal plots that are part of the Jornada Basin LTER Nutrient and Ecosystem impacts of Aeolian Transport (NEAT) study located at the Jornada Experimental Range. The dataset can be used to estimate horizontal dust flux in vegetation removal treatment plots (different percentage vegetation removed) and contiguous downwind plots. Year 2008 was the initial collection and collections in subsequent years occur before and after the windy season. The experiment was designed to test the effects of increases in wind erosion on soil and vegetation properties on the sand sheet geomorphic unit for different levels of herbaceous cover. In order to increase wind erosion rates, vegetation was removed each spring to increase bare surface area and stimulate erosion (the less vegetation present the greater the wind erosion). The experimental design includes three blocks located in one pasture, each with four treatment plots that are maintained at one of four levels of herbaceous vegetation and small shrubs removed (25, 50, 75, 100%) and a control. Treatment plots are 25x50m with 25m buffers between. The vegetation removal includes grasses and small shrubs (like Gutierrezia sarothrae and Zinnia grandiflora), but not mesquite or yucca or any of the larger shrubs. Also, contiguous downwind plots are monitored for soil and vegetation properties, but no removal treatments are performed in these areas. A control treatment where no vegetation was removed that was not downwind of any treatment is also included. This study is ongoing and is updated twice per year - before and after the spring windy season.

openCC (other)May 2022View details →
edi52/100

Aeolian dust weights sampled by BSNE collectors in 18 locations at the Jornada Basin LTER site, 1998-ongoing

This data package contains aeolian dust weights from BSNE collectors at 18 locations at the Jornada Basin LTER. Collections are obtained at the 15 NPP study locations, the Geomet location, Scrape study location (now known as GROWES study), and Pasture 13 Burn study location. The collectors are turned into the wind with wind vanes. The amount of material collected corresponds to the horizontal flux at the height of the collector and the opening area of the collector and the duration of the sampling time. The five heights of the BSNE collectors above the soil surface are 5, 10, 20, 50, and 100 centimeters for every location where samples are taken. The vertical flux of the particles smaller than 10 micrometers is assumed to be a constant ratio of the horizontal sand flux. The objectives of the study are to find patterns of sand flux rates as related to soil and vegetation. Site info: The NPP sites were established to estimate patterns of aboveground primary production. The Geomet site is within a mesquite-dune area that has had long-term protection from cattle grazing. The scrape site (now known as the GROWES site) was originally designed to measure the abrasion of surface crust. The Pasture 13 Burn site is located in a pasture that was originally burned in 1998. Contact the data manager for additional information and site locations. This data collection is ongoing with new data added quarterly.

openCC (other)May 2022View details →
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Soil nutrients sampled in and around harvester ant nests in three habitats at the Jornada Basin LTER site, 1987

This dataset contains soil nutrient content measurements from harvester ant nests and reference soils in three nesting habitats at the Jornada Basin LTER site in 1987. The purpose of this investigation was to answer three general questions: 1. How does the modification of soil properties and the ratios of resources (e.g., water-N) by ants alter species assemblages of winter annual plants at the edge of the ant nests? 2. How does the "spring cleaning", clipping, predation or herbivory by ants affect success of the winter annual plants at the edge of ant nests? 3. Are there significant differences in the floristic assemblage and belowground standing crop (root biomass) between the edge of ant nest and the surrounding unaffected soils? Five ant nests and paired (non-nest) reference soils were sampled in three study locations. This dataset contains chemical analyses for the soil samples collected for each of the three sites, including total nitrogen, (ammonium, nitrate), inorganic phosphorus, and exchangeable cations (K+, Na+, Ca2+ and Mg2+). Also included is below ground biomass from five ant nests for each of the three sites. This study was completed in 1987.

openCC (other)Dec 2021View details →
edi52/100

Soil organic matter content sampled in and around harvester ant nests in three habitats at the Jornada Basin LTER site, 1987

This dataset contains soil organic matter content measurements from harvester ant nests and reference soils in three nesting habitats at the Jornada Basin LTER site in 1987. The purpose of this investigation was to answer three general questions: 1. How does the modification of soil properties and the ratios of resources (e.g., water-N) by ants alter species assemblages of winter annual plants at the edge of the ant nests? 2. How does the "spring cleaning", clipping, predation or herbivory by ants affect success of the winter annual plants at the edge of ant nests? 3. Are there significant differences in the floristic assemblage and belowground standing crop (root biomass) between the edge of ant nest and the surrounding unaffected soils? Five ant nests and paired (non-nest) reference soils were sampled in three study locations. This dataset contains percent (%) organic matter content measured by mass-loss on combustion in a muffle furnace. This study was completed in 1987.

openCC (other)Dec 2021View details →
edi52/100

Gravimetric soil water content sampled in and around harvester ant nests in three habitats at the Jornada Basin LTER site, 1987

This dataset contains gravimetric soil water content measurements from harvester ant nests and reference soils in three nesting habitats at the Jornada Basin LTER site in 1987. The purpose of this investigation was to answer three general questions: 1. How does the modification of soil properties and the ratios of resources (e.g., water-N) by ants alter species assemblages of winter annual plants at the edge of the ant nests? 2. How does the "spring cleaning", clipping, predation or herbivory by ants affect success of the winter annual plants at the edge of ant nests? 3. Are there significant differences in the floristic assemblage and belowground standing crop (root biomass) between the edge of ant nest and the surrounding unaffected soils? Five ant nests and paired (non-nest) reference soils were sampled in three study locations on a monthly schedule from January to May 1987. This dataset contains percent (%) soil water content in these samples determined using the gravimetric method. This study was completed in 1987.

openCC (other)Dec 2021View details →
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Stable isotope (δ¹⁸O and δ²H) measurements of water column and benthic samples from Lake Joyce, McMurdo Dry Valleys, Antarctica, November 2014

Water column and benthic samples were collected from Lake Joyce, a perennially ice-covered lake in the McMurdo Dry Valleys of Antarctica, to support stable isotope analyses. Water column samples were collected in November 2014 at depths ranging from 6 to 53 m using a Niskin bottle deployed through a borehole in the lake ice. The deepest sample (53 m) was collected with concurrent live-drop camera observations to ensure that sampling did not disrupt the underlying sediments. Benthic water samples were collected by divers along the delta front on the north side of the lake, targeting topographic low points at depths between 10 and 28.2 m to assess potential pooling of hyporheic discharge. These samples were taken within ~5 cm of the sediment-water interface using 60 mL syringes. This data package includes stable water isotope measurements (δ¹⁸O and δ²H) to support investigations of spatial variability in lake water isotopic composition and potential hydrologic inputs.

openCC (other)Apr 2025View details →
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MCR LTER: Coral Reef: Population Dynamics: Symbiodinium population initial sampling conditions in corals of Moorea

These data consist of sample collection locations and conditions only, not the results of sequencing. These data were an initial collection of an expected time series which was not repeated. Clade data derived from the sample collection described here are archived on GeoSymbio. Coral are symbiotic with photosynthetic dinoflagellates from the genus Symbiodinium. There are eight divergent clades (A-H) within the genus which each contain many genetic varieties. Different types of Symbiodinium have been shown to affect the growth rate and thermal tolerance of the coral. The diversity and population structure of Symbiodinium on a reef and how it changes over time is therefore critical to the stability and resilience of coral reefs. Our research conducted through the MCR LTER project aims at defining the population structure of Symbiodinium present in the corals of Moorea and documenting changes over time. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2022). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.

openCustomMar 2022View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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