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174
datasets available to search
ShareScore release 0.9.0
Dataset results
174 results for “Single-cell omics”
Single-cell multi-omic and multi-region atlas of the Aging Male Mouse Brain
GEO Series GSE313770. Mus musculus. 108 samples. Type: Methylation profiling by high throughput sequencing; Other.
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis [blood scRNA-seq]
GEO Series GSE250488. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Regulatory landscape of early embryos development revealed by parallel single-cell multi-omics sequencing [BS-seq]
GEO Series GSE136716. Mus musculus. 27 samples. Type: Methylation profiling by high throughput sequencing.
Regulatory landscape of early embryos development revealed by parallel single-cell multi-omics sequencing
GEO Series GSE136718. Mus musculus. 646 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Single-cell multi-omics profiling reveals key regulatory mechanisms that poise germinal vesicle oocytes for maturation in pigs
GEO Series GSE235731. Sus scrofa. 105 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Single-cell multi-omics analysis of the early wound-responsive programs in mouse corneal epithelium
GEO Series GSE285349. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics sequencing reveals the epigenomic landscapes in human spermatogenesis [Bisulfite-Seq]
GEO Series GSE235322. Homo sapiens; Mus musculus. 13 samples. Type: Methylation profiling by high throughput sequencing.
Single-cell muti-omics delineates the dynamics of distinct epigenetic codes coordinating mouse gastrulation
GEO Series GSE249551. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell triple-omics uncovers DNA methylation as key feature of stemness in the healthy and ischemic adult brain
GEO Series GSE210806. Mus musculus. 4532 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease
GEO Series GSE277387. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment
GEO Series GSE228501. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell multi-omics reveals disrupted gene regulatory landscape and cell differentiation by Wilms tumor-associated ENL mutation in the developing kidney (ChIP-Seq)
GEO Series GSE243866. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics sequencing reveals the epigenomic landscapes in human spermatogenesis [CUT&Tag]
GEO Series GSE235323. Homo sapiens. 6 samples. Type: Other.
A multi-omics approach incorporating single-cell RNASequencing reveals murine Leishmania major infection drives a proinflammatory signature alongside a signature of decreased ribosomal biogenesis.
GEO Series GSE181720. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Unveiling the Impact of Arsenic Toxicity on Immune Cells in Atherosclerotic Plaques: Insights from Single-Cell Multi-Omics Profiling
GEO Series GSE240753. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [ATAC-Seq]
GEO Series GSE158865. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell discovery and multi-omic characterization of therapeutic targets in multiple myeloma [scRNA-seq]
GEO Series GSE223060. Homo sapiens. 62 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics analysis identifies metabolism-linked epigenetic reprogramming as a driver of therapy-resistant medulloblastoma [ATAC_seq]
GEO Series GSE283440. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics decodes regulatory programs during development of mouse secondary palate II
GEO Series GSE250247. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Regulatory landscape of early embryos development revealed by parallel single-cell multi-omics sequencing [NOME-seq]
GEO Series GSE136715. Mus musculus. 218 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.