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164 results for “Species coexistence”

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dryad32/100

Data from: Defensive symbionts mediate species coexistence in phytophagous insects

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publicJan 2019View details →
dryad32/100

The effects of sex allocation coevolution on the coexistence of two closely related plant species interacting via interspecific pollen transfer

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publicMar 2025View details →
dryad32/100

Data from: Plastic responses of belowground foraging traits to soil phosphorus-rich patches across 17 coexisting AM tree species in a subtropical forest

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publicDec 2022View details →
dryad32/100

Data from: Multi-dimensional patterns of variation in root traits among coexisting herbaceous species in temperate steppes

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publicApr 2018View details →
dryad32/100

R script: Species coexist more easily if reinforcement is based on habitat preferences than on species recognition

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publicJul 2020View details →
dryad32/100

Data from: Species coexistence: macroevolutionary relationships and the contingency of historical interactions

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publicFeb 2016View details →
dryad32/100

Data from: Frequency dependence and ecological drift shape coexistence of species with similar niches

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publicNov 2017View details →
dryad32/100

Coexistence of predators in time: effects of season and prey availability on species activity within a Mediterranean carnivore guild

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publicAug 2020View details →
dryad32/100

Data for: Interspecific competition and facilitation coexist in mixed-species bird flocks of montane coniferous forests in Taiwan

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publicJun 2022View details →
dryad28/100

Morphological traits influence food choice by coexisting New World warbler (Parulidae) species

<p>New World wood warblers (Parulidae) represent one of the most dramatic adaptive radiations in North America. However, the ecological bases for these species' evolved morphological differences remain poorly understood, especially considering how many foraging and habitat studies the family has inspired. We hypothesized relationships between morphology and diet in parulids. We combined a principal component analysis (PCA) of 18 external morphological traits from 11 species with stomach content data from coexisting species in one breeding community in Louisiana and three wintering communities in Jamaica. The primary morphological differences, corresponding with the first three PCA axes, were body size, morphological adaptations for aerial foraging versus gleaning, and arboreal versus ground adaptations. Our analysis revealed little morphological overlap among all 11 species. Diet differences among the bird species showed a significant relationship to the first two PCA axes of morphological traits. For five coexisting, foliage-gleaning species wintering in Jamaican wet limestone forest, larger warblers ate larger beetles and Orthopterans but not larger ants. In analyses including all four communities, warbler species with aerial foraging morphologies consumed a greater proportion of winged insects than other warbler species. Overall, our results indicate that food and foraging have likely played an integral role in the morphological diversification and coexistence of Parulidae.</p>

opencc-zeroOct 2020View details →
dryad28/100

Data from: Effects of light and topography on regeneration and coexistence of evergreen and deciduous tree species in a Chinese subtropical forest

1. Evergreen broad-leaved forests are widely distributed in eastern Asia with evergreen (EBL) and deciduous (DBL) broad-leaved tree species coexisting under the same climatic regime, raising questions as to the underlying mechanisms. Since EBL and DBL species differ in leaf lifespan, a key component of resource economic strategies, their coexistence might be attributed to regeneration niche partitioning across habitats varying in resource supply. 2. We investigated the effects of variation in insolation and topography on regeneration of EBL and DBL species in a subtropical evergreen broad-leaved forest of eastern China after an ice storm that caused severe canopy disturbance. 3. Using a mixed-effects modeling framework and census data from 2011 to 2014 on 8548 wild seedlings of 123 species, we quantified habitat preferences of EBL and DBL species during post-disturbance regeneration and how their survival and height relative growth rates varied among habitats. 4. The relative density of DBL seedlings (proportional to all seedlings) was greater in habitats with greater (canopy gaps) compared to lesser (understory) insolation and increased with canopy gap size. However, DBL seedlings were not more frequent in higher (valleys) compared to lower (ridges) fertility habitats. Although DBL seedlings exhibited larger differences in growth between higher and lower resource habitats than EBL seedlings, their growth rates did not increase with canopy gap size. Seedlings of EBL species had high survival in all habitats, but larger DBL seedlings survived equally well on ridges. Consequently, the relative density of DBL seedlings declined in valleys, so that by 2014 it became more similar in valley and ridge habitats, whereas it remained higher in gaps than in the understory, and especially in larger gaps. 5. Synthesis. Specialization on contrasting topographic habitats is considered the primary mechanism mediating coexistence between DBL and EBL species. Our results, however, suggest this may not always be true, since seedlings of DBL and EBL species partitioned regeneration niches based on light more so than topography. We propose that coexistence of DBL and EBL species can strongly depend upon canopy disturbance to create a mosaic of habitat patches, including high light gaps favoring regeneration of DBL species.

opencc-zeroDec 2016View details →
dryad28/100

Data from: Coevolution of competing Callosobruchus species does not stabilize coexistence

Interspecific resource competition is expected to select for divergence in resource use, weakening interspecific relative to intraspecific competition, thus promoting stable coexistence. More broadly, because interspecific competition reduces fitness, any mechanism of interspecific competition should generate selection favoring traits that weaken interspecific competition. However, species also can adapt to competition by increasing their competitive ability, potentially destabilizing coexistence. We reared two species of bean beetles, the specialist Callosobruchus maculatus and the generalist C. chinensis, in allopatry and sympatry on a mixture of adzuki beans and lentils, and assayed mutual invasibility after four, eight, and twelve generations of evolution. Contrary to the expectation that coevolution of competitors will weaken interspecific competition, the rate of mutual invasibility did not differ between sympatry and allopatry. Rather, the invasion rate of C. chinensis, but not C. maculatus, increased with duration of evolution, as C. chinensis adapted to lentils without experiencing reduced adaptation to adzuki beans, and regardless of the presence or absence of C. maculatus. Our results highlight that evolutionary responses to interspecific competition promote stable coexistence only under specific conditions that can be difficult to produce in practice.

opencc-zeroDec 2016View details →
dryad28/100

Data from: Environmental variability counteracts priority effects to facilitate species coexistence: evidence from nectar microbes

The order of species arrival during community assembly can greatly affect species coexistence, but the strength of these effects, known as priority effects, appears highly variable across species and ecosystems. Furthermore, the causes of this variation remain unclear despite their fundamental importance in understanding species coexistence. Here, we show that one potential cause is environmental variability. In laboratory experiments using nectar-inhabiting microorganisms as a model system, we manipulated spatial and temporal variability of temperature, and examined consequences for priority effects. If species arrived sequentially, multiple species coexisted under variable temperature, but not under constant temperature. Temperature variability prevented extinction of late-arriving species that would have been excluded owing to priority effects if temperature had been constant. By contrast, if species arrived simultaneously, species coexisted under both variable and constant temperatures. We propose possible mechanisms underlying these results using a mathematical model that incorporates contrasting effects of microbial species on nectar pH and amino acids. Overall, our findings suggest that understanding consequences of priority effects for species coexistence requires explicit consideration of environmental variability.

opencc-zeroDec 2013View details →
dryad28/100

Data from: Energetic constraints on species coexistence in birds

The association between species richness and ecosystem energy availability is one of the major geographic trends in biodiversity. It is often explained in terms of energetic constraints, such that coexistence among competing species is limited in low productivity environments. However, it has proven challenging to reject alternative views, including the null hypothesis that species richness has simply had more time to accumulate in productive regions, and thus the role of energetic constraints in limiting coexistence remains largely unknown. We use the phylogenetic relationships and geographic ranges of sister species (pairs of lineages who are each other's closest extant relatives) to examine the association between energy availability and coexistence across an entire vertebrate class (Aves). We show that the incidence of coexistence among sister species increases with overall species richness and is elevated in more productive ecosystems, even when accounting for differences in the evolutionary time available for coexistence to occur. Our results indicate that energy availability promotes species coexistence in closely related lineages, providing a key step toward a more mechanistic understanding of the productivity–richness relationship underlying global gradients in biodiversity.

opencc-zeroDec 2015View details →
dryad28/100

Data from: Variation in species light acquisition traits under fluctuating light regimes: implications for non‐equilibrium coexistence

Resource distribution heterogeneity offers niche opportunities for species with different functional traits to develop and potentially coexist. Available light (photosynthetically active radiation or PAR) for suspended algae (phytoplankton) may fluctuate greatly over time and space. Species-specific light acquisition traits capture important aspects of the ecophysiology of phytoplankton and characterize species growth at either limiting or saturating daily PAR supply. Efforts have been made to explain phytoplankton coexistence using species-specific light acquisition traits under constant light conditions, but not under fluctuating light regimes that should facilitate non-equilibrium coexistence. In the well-mixed, hypertrophic Lake TaiHu (China), we incubated the phytoplankton community in bottles placed either at fixed depths or moved vertically through the water column to mimic vertical mixing. Incubations at constant depths received only the diurnal changes in light, while the moving bottles received rapidly fluctuating light. Species-specific light acquisition traits of dominant cyanobacteria (Anabaena flos-aquae, Microcystis spp.) and diatom (Aulacoseira granulata, Cyclotella pseudostelligera) species were characterized from their growth-light relationships that could explain relative biomasses along the daily PAR gradient under both constant and fluctuating light. Our study demonstrates the importance of interspecific differences in affinities to limiting and saturating light for the coexistence of phytoplankton species in spatially heterogeneous light conditions. Furthermore, we observed strong intraspecific differences in light acquisition traits between incubation under constant and fluctuating light – leading to the reversal of light utilization strategies of species. This increased the niche space for acclimated species, precluding competitive exclusion. These observations could enhance our understanding of the mechanisms behind the Paradox of the Plankton.

opencc-zeroDec 2017View details →
dryad28/100

Species differences in phenology shape coexistence

<p>Ecological theory produces opposing predictions about whether differences in the timing of life history transitions, or 'phenology', promote or limit coexistence. Phenological separation is predicted to create temporal niche differences, increasing coexistence, yet phenological separation could also competitively favour one species, increasing fitness differences and hindering coexistence. We experimentally manipulated relative germination timing, a critical phenological event, of two annual grass species, <i>Vulpia microstachys</i> and <i>V. octoflora</i>, to test these contrasting predictions. We parameterized a competition model to estimate within-season niche differences, fitness differences, and coexistence, and to estimate coexistence when year-to-year fluctuations of germination timing occur. Increasing germination separation caused parallel changes in niche and fitness differences, with the net effect of weakening within-year coexistence. Both species experienced a competitive advantage by germinating earlier and a four-day head start allowed the generally inferior competitor to exclude the otherwise superior competitor. The overall consequence of germination separation was to limit coexistence within a given year, although year-to-year variation in relative timing of germination was sufficient to support long-term coexistence. Our results clarify how phenological differences structure competitive interactions and highlight the need to quantify year-to-year variation in these differences to better understand species coexistence.</p>

opencc-zeroDec 2018View details →
zenodo28/100

Figure 1 in Resource use and coexistence of three hylid species in temporary ponds of an Eastern Amazonian forest fragment

Figure 1. Location of the Gunma Ecological Park, Santa Barbará municipality, Pará State, Brazil.

opennotspecifiedJan 2022View details →
dryad28/100

Seed dispersal by wind decreases when plants are water-stressed, potentially counteracting species coexistence and niche evolution

<p>Hydrology is a major environmental factor determining plant fitness, and hydrological niche segregation (HNS) has been widely used to explain species coexistence. Nevertheless, the distribution of plant species along hydrological gradients does not only depend on their hydrological niches but also on their seed dispersal, with dispersal either weakening or reinforcing the effects of HNS on coexistence. However, it is poorly understood how seed dispersal responds to hydrological conditions. To close this gap, we conducted a common-garden experiment exposing five wind-dispersed plant species (Bellis perennis, Chenopodium album, Crepis sancta, Hypochaeris glabra, and H. radicata) to different hydrological conditions. We quantified the effects of hydrological conditions on seed production and dispersal traits, and simulated seed dispersal distances with a mechanistic dispersal model. We found species-specific responses of seed production, seed dispersal traits, and predicted dispersal distances to hydrological conditions. Despite these species-specific responses, there was a general positive relationship between seed production and dispersal distance: plants growing in favourable hydrological conditions not only produce more seeds but also disperse them over longer distances. This arises mostly because plants growing in favourable environments grow taller and thus disperse their seeds over longer distances. We postulate that the positive relationship between seed production and dispersal may reduce the concentration of each species to the environments favourable for it, thus counteracting species coexistence. Moreover, the resulting asymmetrical gene flow from favourable to stressful habitats may slow down the microevolution of hydrological niches, causing evolutionary niche conservatism. Accounting for context-dependent seed dispersal should thus improve ecological and evolutionary models for the spatial dynamics of plant populations and communities.</p>

opencc-zeroOct 2022View details →
zenodo28/100

Figure 9 from: Conradi M, Bandera E, Mudrova SV, Ivanenko VN (2018) Five new coexisting species of copepod crustaceans of the genus Spaniomolgus (Poecilostomatoida: Rhynchomolgidae), symbionts of the stony coral Stylophora pistillata (Scleractinia). ZooKeys 791: 71-95. https://doi.org/10.3897/zookeys.791.28775

Figure 9 Spaniomolgus, females. aS.crassus (Humes &amp; Ho, 1968), confocal photo. S.stylophorus sp. n., SEMb Habitus ventral c Rostral area d Labrum.

opencc-by-4.0Oct 2018View details →
zenodo28/100

Figure 6 from: Conradi M, Bandera E, Mudrova SV, Ivanenko VN (2018) Five new coexisting species of copepod crustaceans of the genus Spaniomolgus (Poecilostomatoida: Rhynchomolgidae), symbionts of the stony coral Stylophora pistillata (Scleractinia). ZooKeys 791: 71-95. https://doi.org/10.3897/zookeys.791.28775

Figure 6 Spaniomolgusmaculatus sp. n., female. a Habitus dorsal b Urosome dorsal c Antenna d Maxilliped e Leg 4 f Genital area. Scale bars: 300 µm (a); 100 µm (b); 50 µm (c–f).

opencc-by-4.0Oct 2018View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record