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314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
Distinct nuclear compartment-associated genome architecture in the developing mammalian brain
GEO Series GSE175679. Macaca mulatta; Mus musculus; Homo sapiens. 62 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_Hi-C)
GEO Series GSE133882. Triticum aestivum. 2 samples. Type: Other.
Replication timing alterations in leukemia reflect stable clinically-relevant changes in genome architecture [Repli-Chip]
GEO Series GSE130372. Homo sapiens. 63 samples. Type: Other; Third-party reanalysis; Genome variation profiling by genome tiling array.
The genetic architecture of the genome-wide transcriptional response to ER stress in the mouse
GEO Series GSE63756. Mus musculus. 68 samples. Type: Expression profiling by high throughput sequencing.
Genomic and epigenomic architecture of hepatocellular carcinoma
GEO Series GSE83691. Homo sapiens. 26 samples. Type: Methylation profiling by genome tiling array.
Comparison of genome architecture at two stages of male germline cell differentiation in Drosophila
GEO Series GSE157565. Drosophila melanogaster. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The genomic architecture of host whole blood transcriptional response to malaria infection
GEO Series GSE34404. Homo sapiens. 155 samples. Type: Expression profiling by array.
Promoter bivalency favors an open architecture of the stem cell genome
GEO Series GSE99530. Mus musculus. 80 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
In-situ cell-type specific chromatin topologies in the brain revealed by genome architecture mapping [ATAC-seq]
GEO Series GSE174024. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering Pre-existing and Induced 3D Genome Architecture Changes involved in Constricted Melanoma Migration
GEO Series GSE275397. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing; Other.
DNA methylation maintains integrity of higher order genome architecture (Nanopore)
GEO Series GSE159663. Homo sapiens. 2 samples. Type: Genome variation profiling by high throughput sequencing.
HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [RNA-seq]
GEO Series GSE141758. Plasmodium falciparum. 18 samples. Type: Expression profiling by high throughput sequencing.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites [RNA-seq]
GEO Series GSE224729. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
The Genomic Architecture of Pregnancy-Associated Plasticity in the Maternal Mouse Hippocampus
GEO Series GSE198447. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
BAZ2A safeguards genome architecture of ground-state pluripotent stem cells
GEO Series GSE112222. Mus musculus. 49 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Replication timing alterations in leukemia reflect stable clinically-relevant changes in genome architecture [Repli-Seq]
GEO Series GSE130373. Homo sapiens. 48 samples. Type: Other; Third-party reanalysis; Genome variation profiling by high throughput sequencing.
Effects of genome architecture and epigenetic factors on susceptibility of promoter CpG islands to aberrant DNA methylation induction.
GEO Series GSE28284. Homo sapiens. 26 samples. Type: Methylation profiling by genome tiling array.
Architectural alterations of the fission yeast genome across the cell cycle
GEO Series GSE93198. Schizosaccharomyces pombe. 20 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [RNA-Seq]
GEO Series GSE95111. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Genomic architecture and evolution of a seasonal reaction norm [Hi-C]
GEO Series GSE152997. Junonia coenia. 3 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.