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245
datasets available to search
ShareScore release 0.9.0
Dataset results
245 results for “genome-wide differentiation”
Genome-wide transcriptome analysis during differentiation of human embryonic stem (hES) cells into cardiac lineage
GEO Series GSE97268. Homo sapiens. 6 samples. Type: Expression profiling by array.
Genome-wide maps of chromatin state during the differentiation of hESC into hNECs (ChIP-Seq)
GEO Series GSE76082. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide differential expression of genes and small RNAs in testis of two different porcine breeds and at two different ages
GEO Series GSE76665. Sus scrofa. 24 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Genome-wide identification and differential expression of long non-coding RNAs in hypoxic zebrafish brain
GEO Series GSE153687. Danio rerio. 15 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide non-polyadenylated transcription in differentiating mouse embryonic stem cells reveals novel non-coding RNA related to pluripotency and differentiation
GEO Series GSE37338. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
RNAseq analysis of a genome-wide loss-of-function CRISPR/Cas9 library in haploid human embryonic stem cells (hESCs) differentiated into three germ layers
GEO Series GSE143373. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.
Developmental genome-wide occupancy analysis of bZIP transcription factor NRL uncovers the role of c-Jun in early differentiation of rod photoreceptors in the mammalian retina [CUT&RUN]
GEO Series GSE197420. Mus musculus. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide transcriptomic analysis of cardiomyocyte differentiation from human embryonic stem cells and iPS cells (RNA-seq)
GEO Series GSE85331. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide chromatin accessibility profiling of cardiomyocyte differentiation from human embryonic stem cells and iPS cells (ATAC-seq)
GEO Series GSE85330. Homo sapiens. 32 samples. Type: Other.
Genome-wide transcriptomic analysis and chromatin accessibility profiling of cardiomyocyte differentiation from human embryonic stem cells and iPS cells
GEO Series GSE85332. Homo sapiens. 64 samples. Type: Expression profiling by high throughput sequencing; Other.
Genome-wide Human Placenta Enhancer Identification and Association with Function, Differentiation, and Disease [CHIP-seq]
GEO Series GSE222030. Homo sapiens. 45 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation [Trim33 RNA-Seq]
GEO Series GSE259392. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis identifies a functional association of Tet1 and Polycomb PRC2 in mouse embryonic stem cells but not in differentiated tissues
GEO Series GSE44566. Mus musculus. 8 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome-wide maps of H3K27me3 in chromatin state in embryonic stem cells differentiated motor neurons
GEO Series GSE114283. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of chromatin state during the differentiation of hESC into hNECs (MNase-Seq)
GEO Series GSE76083. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide microarray analysis to identify the differentially expressed patterns of lncRNAs of cholesteatoma tissues compared with matched normal skin tissues.
GEO Series GSE102673. Homo sapiens. 8 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Genome-wide transcriptome analysis of Esrrb wt and KO mouse embryonic stem cells, differentiated towards FS cells with AloXR protocol (Kinoshita et al., 2021)
GEO Series GSE208703. Mus musculus. 41 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide distribution of AdpA, a global regulator for secondary metabolism and morphological differentiation in Streptomyces [solid]
GEO Series GSE34037. Streptomyces griseus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide analysis of differentially expressed profiles of mRNAs, lncRNAs and circRNAs in Cryptosporidium baileyi infection
GEO Series GSE108147. Gallus gallus. 6 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptome of rice laser-microdissected crown root primordia reveals genes expressed specifically during the early differentiation stages of crown roots
GEO Series GSE133593. Oryza sativa Japonica Group; Oryza sativa. 12 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.