Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
485
datasets available to search
ShareScore release 0.9.0
Dataset results
485 results for “scrnaseq”
scRNAseq of lungs from APOE knock-in mice with COVID-19
GEO Series GSE199498. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
scRNAseq of blood and CSF CD4+ T cells from MS patients and controls
GEO Series GSE232343. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v2
GEO Series GSE260798. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
A phenotypic screening platform for identifying chemical modulators of astrocyte reactivity [scRNAseq]
GEO Series GSE184437. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1ER_F12_clone_2]
GEO Series GSE223488. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1E_E7_clone_RAS]
GEO Series GSE223492. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Human blastoids model blastocyst development and implantation [scRNAseq]
GEO Series GSE177616. Homo sapiens. 2715 samples. Type: Expression profiling by high throughput sequencing.
Schwann cell-secreted PGE2 promotes sensory neuron excitability during development [scRNAseq_Dataset2]
GEO Series GSE268625. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
scRNAseq and scATACseq of Cd45+ cells from brains of 5XFAD mice bearing distinct APOE alleles and across age
GEO Series GSE225503. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Epigenetic activation of plasmacytoid DC drives IFNAR-dependent therapeutic differentiation of AML [scRNAseq DC]
GEO Series GSE198118. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Human blood monocytes scRNAseq
GEO Series GSE211603. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional and epigenetic reprogramming mediated by chronic IL1β exposure drives self-renewal ability and myeloid priming in TET2 deficient stem and progenitor cells [10x_scRNAseq]
GEO Series GSE209994. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
The hypoxia-inducible factor EPAS1 is required for normal spermatogonial stem cell function in regenerative conditions [EPAS1 scRNAseq]
GEO Series GSE235319. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Ependymoma subpopulation lineages underlie clinical classification and outcome (scRNAseq data set)
GEO Series GSE125969. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.
scRNAseq analysis of mouse draining lymph nodes during Ross River virus or LCMV infection
GEO Series GSE275970. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development (ThpokKO scRNAseq)
GEO Series GSE157286. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing (scRNAseq) of epithelial cells from untreated and IFNy-treated colon organoids
GEO Series GSE255366. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Fate mapping of single NK cells identifies a type 1 innate lymphoid-like lineage that bridges innate and adaptive recognition of viral infection [scRNAseq_spleen_LN_total_NK]
GEO Series GSE180977. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Stem-like T cells are associated with the pathogenesis of ulcerative colitis in humans [scRNAseq_Human]
GEO Series GSE235663. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
The histone acetyltransferase MOZ is a molecular dependency and therapeutic target in NUP98-rearranged acute myeloid leukemia [WGS, ATACseq, CUT&RUN, scRNAseq]
GEO Series GSE283096. Mus musculus; Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.