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233 results for “seasonal dynamics”
Data from: Seasonal dynamics in terrestrial insect communities after the impact of the Brumadinho Tailings Dam Disaster
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Seasonal dynamics of the wild rodent faecal virome
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Network dynamics revealed from eDNA highlight seasonal variation in urban mammal communities
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Data from: Seabird presence and seasonality influence nutrient dynamics of atoll habitats
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Data from: Causes and consequences of avian within-season dispersal decisions in a dynamic grassland environment
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Seasonal dynamics of sinking organic matter in the Pacific Arctic Ocean revealed by nitrogen isotope ratios of amino acids
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Data from: Changing with the times: Seasonal environmental gradients unveil dynamic bat assemblages and vulnerability
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Data from: Microclimate predicts within-season distribution dynamics of montane forest birds
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Flight altitude dynamics of migrating European nightjars across regions and seasons
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Dynamic metabolic and molecular changes during seasonal shrinking in <em>Sorex araneus</em>
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Seasonal precipitation distribution determines ecosystem CO₂ and H₂O exchange by regulating spring soil water-salt dynamics in a brackish wetland
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Seasonal dynamics in the mammalian microbiome between disparate environments
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Learning from dynamic traits: Seasonal shifts yield insights into ecophysiological tradeoffs across scales from macroevolutionary to intra-individual
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In situ soil respirations throughout the 2020 growing season across an N fertilization gradient:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Data from: Seasonal dynamics of flock interaction networks across a human-modified landscape in lowland Amazonian rainforest
<p><span>Although lowland tropical rainforests were once widely believed to be the archetype of stability, seasonal variation exists. In these environments, seasonality is defined by rainfall, leading to a predictable pattern of biotic and abiotic changes. Only the full annual cycle reveals niche breadth, yet most studies of tropical organisms ignore seasonality, thereby underestimating realized conditions. If human-modified habitats display more seasonal stress than intact habitats, then ignoring seasonality will have particularly important repercussions for conservation. We examined the seasonal dynamics of Amazonian mixed-species flocks—an important species interaction network—across three habitats with increasing human disturbance. We quantified seasonal space use, species richness and attendance, and four ecological network metrics for flocks in primary forest, small forest fragments, and regenerating secondary forest in central Amazonia. Our results indicate that, even in intact, lowland rainforest, mixed-species flocks exhibit seasonal differences. </span>During the dry season, flocks included more species, generally ranged over larger areas, and displayed network structures that were less complex and less cohesive. We speculate that because most flocking species nest during the dry season—a time of reduced arthropod abundance—flocks are simultaneously constrained by these two competing pressures. Moreover, these seasonal differences were most pronounced in forest fragments and secondary forest, habitats that are less buffered from the changing seasons. <span>Our results suggest that seasonality influences the conservation value of human-modified habitats, raising important questions about how rainforest organisms will cope with an increasingly unstable climate.</span></p>
Data from: Seasonal dynamics of spatial distribution and overlap between Northeast Arctic cod (Gadus morhua) and capelin (Mallotus villosus) in the Barents Sea
The trophic link between cod (Gadus sp.) and capelin (Mallotus sp.) is important in many panarctic ecosystems. Since the early 2000s, the Northeast Arctic cod stock (G. morhua) in the Barents Sea has increased greatly, and the sea has been exceptionally warm. Such changes have potentially large effects on species distributions and overlap, which in turn could affect the strength of species interactions. Due to its high latitude location, the Barents Sea has strong seasonal variation in physical conditions and interactions. To study drivers of variation in cod-capelin overlap, we use data from two annual surveys run in winter and in autumn of 2004-2015. We first model winter and autumn spatial distributions of mature and immature cod and capelin. We then calculate overlap from model predictions on a grid with similar spatial resolution as the survey data. Our approach allowed us to interpret changes in overlap as species-specific effects of stock size and temperature, while accounting for sampling variation due to sampling time and depth. We found that during winter both species expanded their distribution in response to increased stock sizes, but how strongly and where the expansion occurred varied. The effect of temperature on distributions varied in space, and differed for cod and capelin and for different components of the two species. The results for autumn were clearer and more consistent. Both species expanded their distribution areas as their stock sizes increased. A positive effect of temperature was found in the north-eastern Barents Sea, where temperatures were lowest at the start of the study. Overlap increased and shifted north-eastwards during the study period and remained high despite a decline in the capelin stock. The increased overlap during autumn could mainly be attributed to the shift in cod distribution with increased cod stock biomass.
Data from: Seasonal population and individual niche dynamics in a tetra fish in the Pantanal wetlands
In seasonal tropical regions, rainfall and/or temporary floods during the wet season generally increase the abundance and diversity of food resources to many consumers as compared to the dry season. Therefore, seasonality can affect intraspecific competition and ecological opportunity, which are two important ecological mechanisms underlying population and individual niche variations. Here, we took advantage of the strong seasonality in the Pantanal wetlands to investigate how within- and between-individual diet variations relate to seasonal population niche dynamics of the tetra fish Astyanax lacustris. We quantified dietary niche using gut contents and stable isotopes. Tetras had higher gut fullness and better body condition in the wet season, suggesting that competition is more intense in the dry season. The population niche was broader in the wet season due to an increase in diet divergence between individuals, in spite of potential stronger competition in the dry season. We posit that low ecological opportunity in the dry season limits the diversifying effect of intraspecific competition, constraining population niche expansion. Our results add new insights on how seasonality affects population and individual diets, indicating that intraspecific competition and ecological opportunity interact to determine temporal niche variations in seasonal environments.
Data from: Wildfire alters the structure and seasonal dynamics of nocturnal pollen-transport networks
Wildfires drive global biodiversity patterns and affect plant–pollinator interactions, and are expected to become more frequent and severe under climate change. Post‐fire plant communities often have increased floral abundance and diversity, but the effects of wildfires on the ecological process of pollination are poorly understood. Nocturnal moths are globally important pollinators, but no previous study has examined the effects of wildfire on nocturnal pollination interactions. We investigated the effects of wildfire on nocturnal pollen‐transport networks. We analysed the abundance and species richness of moths and flowers, and the structure of these networks, at three burned and three unburned sites in Portugal for two years, starting eight months after a large fire. Nocturnal pollen‐transport networks had lower complexity and robustness following the fire than at nearby unburned sites. Overall, 70% of individual moths carried pollen, and moths were found to be transporting pollen from 83% of the flower species present. Burned sites had significantly more abundant flowers, but less abundant and species‐rich moths. Individual moths transported more pollen in summer at burned sites, but less in winter; however, total pollen transport by the moth assemblage at burned sites was just 20% of that at unburned sites. Interaction turnover between burned and unburned networks was high. Negative effects of fire upon moths will likely permeate to other taxa through loss of mutualisms. Therefore, if wildfires become more frequent under climate change, community resilience may be eroded. Understanding the responses of ecological networks to wildfire can inform management that promotes resilience and facilitates whole‐ecosystem conservation.
Data from: Stay at home aphids: comparative spatial and seasonal metapopulation structure and dynamics of two specialist tansy aphid species studied using microsatellite markers
Two tansy-feeding aphids – Macrosiphoniella tanacetaria (MA) and Metopeurum fuscoviride (ME) – were studied at a small spatial scale in and around Jena (< 80 km2) using polymorphic microsatellite markers. Both species were found in ~ 60% of sites formerly known to harbour the aphids, although generally when they did occur, they occurred singly (MA ~ 50%; ME ~60%) and rarely together on the same plant at the same time (~10%) and then usually only in the early part of the growing season. This difference may be due to quasi-apparent competition effects elicited to ants farming ME aphids, and preferentially actively eliminating or disturbing MA aphids. In terms of population genetics, both aphids showed extreme genetic heterogeneity within a metapopulation structure, ME more than MA, i.e. higher FST values, ~ 0.4 vs. 0.15, respectively, and limited levels of interpopulation gene flow. Subpopulations often deviated from Hardy-Weinberg equilibrium and showed linkage disequilibria, as expected in animals with extended parthenogenetic reproduction, and had positive FIS values for most large samples, suggesting inbreeding, and possibly philopatry, certainly in ME. Hierarchical analysis (allele range and number per locus, analysis of molecular variance and FST) strongly suggested that the plant rather than site governs the level of genetic variation. Bayesian clustering analysis revealed that both species had heterogeneous historical genetic patterning, with K (number of subgroups) ranging from 3-7. Evidence is also provided from isolation by distance (IBD) and private allele analyses, that in MA, the presence of winged autumn males, absent in ME where males are wingless, influences comparative population genetic structuring, such that ME subpopulations are comparatively more inbred and genetically differentiated than MA subpopulations. Lastly, additional spatial arrangement (ALLELES-IN-SPACE) analysis showed that in both species, certain subpopulations were genetically isolated from the remainder, probably due to geographical barriers, including intervening buildings and woods. As such, the biology of these tansy aphids living in semi-natural habitats is very different from many pest aphid species examined within agro-ecosystems and infesting ephemeral crops, since the former seem much more reluctant to fly and hence show contrastingly much higher levels of interpopulation divergence, even at small spatial scales as here investigated. Indeed, the number of genotypic clusters found for tansy aphids found using Bayesian approaches is similar to that for the major pest the peach-potato aphid, Myzus persicae, globally.
Data from: Seasonal dynamics of waterbird assembly mechanisms revealed by phylogenetic and functional diversity in a subtropical wetland
Despite growing interest in phylogenetic and functional methods in ecological assembly, less attention has been paid to seasonal variation patterns of migrant species. Migrants can rapidly mediate influences of species interactions and environmental factors through seasonal movement, suggesting dynamical relative importance of different assembly mechanisms among seasons. Here we describe seasonal dynamics in phylogenetic and functional diversity of waterbirds in Mai Po Wetland, in a subtropical region with significant predictable temporal variation. Phylogenetic and functional structure of α diversity varied seasonally. Specifically, phylogenetic structures clustered in summer, while being over-dispersed in winter. However, phylogenetic structure in spring and autumn was intermediate with a transition to random. Functional structure was clustered in spring but showed over-dispersion in the other three seasons. For β diversity, summer and winter assemblages had two distinct groups, while spring and autumn assemblages were mixed. Thus, waterbird assemblages were primarily shaped by interspecific competition in winter. Random processes tended to shape assemblage in spring. Environmental factors played a more important role in summer . In addition, phylogenetic distance of probability of co-occurrence of species pairs was significantly larger in winter than in summer. These results suggest that the relative importance of assemblage mechanisms can vary seasonally in response to changing environmental conditions, suggesting that studies attempting to infer a single dominant assembly mechanism may ignore important assembly processes. Temporal shifts in assembly mechanisms may play an important role in maintaining diversity of subtropical and temperate wetlands and perhaps other dynamic systems.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.