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178 results for “seawater”
Symbiodiniaceae cell densities in feces of coral reef fish, sediments and seawater in Mo'orea, French Polynesia, July-August 2019
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Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats
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Data from: Population characteristics of a large whale shark aggregation inferred from seawater environmental DNA
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Divergent responses of symbiotic and asymbiotic N2 fixation to seawater additions
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UF pre-treatment of seawater RO feedwater - performance data
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Figure 5 in Influence of CO -induced seawater acidification on the development and lifetime reproduction of Tigriopus japonicus Mori, 1938
Figure 5. Average number of nauplii per viable egg sac (N = 3) at four pH levels (median indicated with a bar; quartiles, minimum and maximum also shown).
Figure 1 in Influence of CO -induced seawater acidification on the development and lifetime reproduction of Tigriopus japonicus Mori, 1938
Figure 1. Effect of carbon dioxide (CO2)-induced seawater acidification on development time [mean ± standard deviation (SD), N = 3] of Tigriopus japonicus (N–C, nauplius to copepodite; C–A, copepodite to adult).
Seawater body dipping behaviour of the Mauritian flying fox
<p>The Mauritian flying fox (<i>Pteropus niger</i>) is the last surviving fruit bat species on Mauritius and is currently Endangered. The species faces threats as only 4.4% of habitats with high native content remains, however highly fragmented and invaded by alien species. Furthermore, stochastic events such as cyclones negatively impact food resources availability and likely encourage flying foxes to explore alternative ways to complement their diet in situation of food shortages. We organized various trips after extensive stochastic events to observe flying foxes attempting to dip their lower body part in the sea. Around 15 seawater body dipping instances were observed. Each time, the flying fox would clumsily dip itself into the water and lick their wet fur immediately after. This shows the species' behavioral versatility and plausibly their resilience ability and local adaptation to particular opportunities within their environment. These observations potentially unravel an alternative way for flying foxes to complement minerals intake. The situation might also emphasize the decline in the species native foraging habitats quality and consequently prompts long-term conservation measures. Restoration of native forests from invasive alien species could maximize diverse native fruits availability all year round, thus limiting chances of food shortages for flying foxes.</p>
Data from: Seawater environmental DNA reflects seasonality of a coastal fish community
Coastal marine fish populations are in decline due to overfishing, habitat destruction, climate change and invasive species. Seasonal monitoring is important for detecting temporal changes in the composition of fish communities, but current monitoring is often non-existent or limited to annual or semi-annual surveys. In the present study, we investigate the potential of using environmental DNA (eDNA) metabarcoding of seawater samples to detect the seasonal changes in a coastal marine fish community. Water sampling and snorkelling visual census were performed over 1 year (from 23rd of August 2013 to 11th of August 2014) at a temperate coastal habitat in Denmark (55°45′39″N, 12°35′59″E) and compared to long-term data collected over a 7-year period. We used Illumina sequencing of PCR products to demonstrate that seawater eDNA showed compositional changes in accordance with seasonal changes in the fish community. The vast majority of fish diversity observed in the study area by snorkelling was recovered from sequencing, although the overlap between methods varied widely among sampling events. In total, 24 taxa were detected by both methods, while five taxa were only detected using eDNA and three taxa were only detected by snorkelling. A limitation of the applied primers was the lack of resolution to species level in a few diverse families, and varying sequencing depth between samples represents a potential bias. However, our study demonstrates the utility of eDNA for recovering seasonal variation in marine fish communities, knowledge of which is essential for standardised long-term monitoring of marine biodiversity.
Data from: Acid-base physiology over tidal periods in the mussel Mytilus edulis: size and temperature are more influential than seawater pH
Ocean acidification (OA) studies to date have typically used stable open-ocean pH and CO2 values to predict the physiological responses of intertidal species to future climate scenarios, with few studies accounting for natural fluctuations of abiotic conditions or the alternating periods of emersion and immersion routinely experienced during tidal cycles. Here, we determine seawater carbonate chemistry and the corresponding in situ haemolymph acid-base responses over real time for two populations of mussel (Mytilus edulis) during tidal cycles, demonstrating that intertidal mussels experience daily acidosis during emersion. Using these field data to parameterise experimental work we demonstrate that air temperature and mussel size strongly influence this acidosis, with larger mussels at higher temperatures experiencing greater acidosis. There was a small interactive effect of prior immersion in OA conditions (pHNBS 7.7/pCO2 930 µatm) such that the haemolymph pH measured at the start of emersion was lower in large mussels exposed to OA. Critically, the acidosis induced in mussels during emersion in situ was greater (ΔpH ~0.8 units) than that induced by experimental OA (ΔpH ~0.1 units). Understanding how environmental fluctuations influence physiology under current scenarios is critical to our ability to predict the responses of key marine biota to future environmental changes.
Data from: Fluctuating seawater pH/ p CO 2 regimes are more energetically expensive than static pH/ p CO 2 levels in the mussel Mytilus edulis
Ocean acidification (OA) studies typically use stable open-ocean pH or CO2 values. However, species living within dynamic coastal environments can naturally experience wide fluctuations in abiotic factors, suggesting their responses to stable pH conditions may not be reflective of either present or near-future conditions. Here we investigate the physiological responses of the mussel Mytilus edulis to variable seawater pH conditions over short- (6 h) and medium-term (2 weeks) exposures under both current and near-future OA scenarios. Mussel haemolymph pH closely mirrored that of seawater pH over short-term changes of 1 pH unit with acidosis or recovery accordingly, highlighting a limited capacity for acid–base regulation. After 2 weeks, mussels under variable pH conditions had significantly higher metabolic rates, antioxidant enzyme activities and lipid peroxidation than those exposed to static pH under both current and near-future OA scenarios. Static near-future pH conditions induced significant acid–base disturbances and lipid peroxidation compared with the static present-day conditions but did not affect the metabolic rate. These results clearly demonstrate that living in naturally variable environments is energetically more expensive than living in static seawater conditions, which has consequences for how we extrapolate future OA responses in coastal species.
Surface seawater concentration of acetone: monthly climatology
Acetone is one of the most abundant oxygenated volatile organic compounds (VOCs) in the atmosphere. The oceans impose a strong control on atmospheric acetone, yet the oceanic fluxes of acetone remain poorly constrained. The air-sea exchange of acetone is largely controlled by the surface seawater concentration of acetone. This dataset consists of the surface seawater concentration of acetone, predicted by an observationally trained machine-learning algorithm (random forest). The observationally trained machine-learning algorithm is discussed in Wang et al. (2019). The training dataset includes ship-borne observations from a number of previous studies: Yang et al. (2014a); Yang et al. (2014b); Dixon et al. (2014); Beale et al. (2013); Kameyama et al. (2010); Hudson et al. (2007); Marandino et al. (2005); Marandino et al. (Knorr06). This dataset is in 0.9*1.25 (degree*degree) horizontal resolution (finite volume), and can be used to calculate the bi-directional air-sea exchange of acetone.
Early-age hydration behaviour of Seawater-mixed LWAC
<p>The following files consists of data from the original article "Seawater-Mixed Lightweight Aggregate Concretes with Dune Sand, Waste Glass and Nanosilica: Experimental and Life Cycle Analysis" published in International Journal of Concrete Structures and Materials.</p><p>Link to access the article at source: https://link.springer.com/article/10.1186/s40069-023-00613-4#article-info</p><p>The data set consists of heat of hydration at an instantaneous time and cumulative heat of hydration up to 7 days of hydration are included. Furthermore, the dataset consists of information on the particle size distribution of the raw materials (CEM III and nano-Silica) used in this research work. </p><p>The origin file consists of three sheet with following information.</p><p>First sheet consists of Particle size distribution of CEM III and nano Silica.</p><p>Second sheet consists of cumulative heat of hydration up to 7 days for specimens TW0, SW0, TW3, and SW3.</p><p>Third sheet consists of heat flow at instantaneous time up to 7 days for specimens TW0, SW0, TW3, and SW3.</p><p>ID description:</p><p>TW0 - CEM III mixed with Tap water</p><p>SW0 - CEM III mixed with Seawater</p><p>TW3 - CEM III + 3% nano-Silica mixed with Tap water<br>SW3 - CEM III + 3% nano-Silica mixed with Seawater</p><p>PS - The attached file could be opened only with ORIGIN 2021b or any other compatible versions of the same software</p>
Seawater temperature and salinity depth profiles (CTD) - SAMS IMTA Lab
<p>Dataset contains depth profiles (0m to 20m below the surface) of seawater temperture and salinity, recorded using a handheld CTD (SonTek CastAway-CTD).</p> <p>Data range spans over 4 years (Oct 2020-2024; ASTRAL H2020 project lifespan) containing 53 sampling occassions i.e. on average montghly CTD casts.</p> <p>Hnadheld CTD was frequently cross-calibrated agianst SAMS in-house Seabird CTD and resulting offests appliced to the raw data recordings.</p>
The potential of seep carbonates to preserve the seawater isotope compositions
<p><span>Supplemental information present Supplementary Notes and Supplementary Tables. </span></p>
Rapid range expansion of a marine ectotherm reveals the demographic and ecological consequences of short-term variability in seawater temperature and dissolved oxygen
<p>The distributions of marine ectotherms are governed by physiological sensitivities to long-term trends in seawater temperature and dissolved oxygen. Short-term variability in these parameters has the potential to facilitate rapid range expansions, and the resulting ecological and socioeconomic consequences may portend those of future marine communities. Here, we combine physiological experiments with ecological and demographic surveys to assess the causes and consequences of sudden but temporary poleward range expansions of a marine ectotherm with considerable life history plasticity (California market squid, <i>Doryteuthis opalescens</i>). We show that sequential factors related to resource accessibility in the core range may drive these expansions—the buildup of large populations due to competitive release, and climate-associated temperature increase and oxygen loss that constrain aerobic activity. We also reveal that poleward range expansion alters the body size—and therefore trophic role—of invading populations, with potential negative implications for socioeconomically valuable resident species. To help forecast rapid range expansions of marine ectotherms, we advocate that research efforts focus on factors impacting resource accessibility in core ranges. Determining how environmental conditions in receiving ecosystems affect body size, and how body size is related to trophic role, will help refine estimates of the impacts of future marine communities.</p>
Data for "Integrating high-resolution Sr/Ca and ultrastructural analyses of the Tridacna squamosa shell to reconstruct sub-daily seawater temperature variation"
<p>This repository contains all data generated for the publication "Integrating high-resolution Sr/Ca and ultrastructural analyses of the Tridacna squamosa shell to reconstruct sub-daily seawater temperature variation" currently under review</p>
Fig. 5 in Refining the Occurrence of Viral Encephalopathy and Retinopathy, Photobacteriosis, and Vibriosis in Connection with Seawater Physicochemical Parameters: A Five-Year Case Study Abstract
Fig. 5: Estimated time series of the probability of absence/presence (0 to 1) based on the model (depicted by a line), alongside on-site records of absence/presence.
Water quality data and isotope data of groundwater, river water and seawater in the Pearl River Estuary
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Seawater velocities measured by autonomous sailbuoy Adcp in the Barents Sea from May to July 2021 on campaign the PolarFront project
<p>This dataset contains ocean currents measured by sailing autonomous surface vehicle <em>Adcp</em>, while on campaign at 70–77N in the Barents Sea for the <a href="https://github.com/akvaplan-niva/polarfront">PolarFront</a> research project, from 16 May to 25 July 2021 (Daase 2021). The <em>Adcp</em> is equipped with a <a href="https://www.aanderaa.com/">Aanderaa</a> DCPS 5400 operating at 600 kHz, mounted in the keel at –0.2 m.</p> <p><strong>Space/time coverage</strong></p> <ul> <li>Time: 2021-05-16T13:45:00Z/2021-07-25T13:15:00Z</li> <li>Space: [20.5,70.0,33.0,76.8] ([W,S,E,N])</li> </ul> <p><strong>Data distributions</strong></p> <p><em>Datalogger (text files)</em></p> <p>The primary distribution consists of 2 datalogger text files retrieved post-mission from sailbuoy internal storage. The files are the original full scale original data records, as captured by the internal sofware of manufacturer <a href="http://www.sailbuoy.no/">Offshore Sensing</a>.</p> <ul> <li>DATA.TXT: Position and sensor metadata</li> <li>DCPS.TXT: Ocean currents</li> </ul> <p><em>GeoJSON</em></p> <p>For increased data interoperability, a <a href="https://www.rfc-editor.org/info/rfc7946"><strong>GeoJSON</strong></a> file is also included, consisting of Point features like the following:</p> <p>{ "geometry": { "coordinates": [30.11165, 76.438894], "type": "Point" }, "properties": { "time": "2021-05-19T22:45:00Z", "TTFF": 11, "Count": 24, "Commands": 0, "TxTries": 1, "ONT": 635, "DiskUsed": 0.783123, "Files": 0, "I": 0.01564, "V": 13.195122, "Temperature": 4.06502, "DCPSStatus": 0, "DCPSOnMin": 10, "DCPSSpeed": 0.329999, "DCPSDirection": 233.233643 }, "type": "Feature" }</p> <p>The GeoJSON file is derived from DATA.TXT and contains the full position and DCPS metadata log in a standard/machine-parsable format, including coordinated universal time following <a href="https://datatracker.ietf.org/doc/html/rfc3339">RFC 3339</a>/<a href="https://www.iso.org/obp/ui#iso:std:iso:8601:-1:ed-1:v1:en">ISO 8601</a>.</p> <p><strong>Data formats and interoperability</strong></p> <p>Both of the datalogger text files are in non-standard vendor formats. The DCPS text format is described in the <a href="https://www.aanderaa.com/media/pdfs/td304-manual-dcps.pdf">vendor manual.</a></p> <p><strong>Related publications</strong></p> <p>For a recent discussion on measuring ocean currents from sailbuoys compared to other platforms, see <a href="https://doi.org/10.3390/s22155553">Wullenweber et al., 2022</a>.</p> <p>See also <a href="https://doi.org/10.1029/2019GL086649">Swart et al.,2020</a>; <a href="https://doi.org/10.3390/s21206752">Camus et al., 2021</a> for further discussion on near-surface data collection with sailbuoys and other autonomous vehicles.</p> <p><strong>References</strong></p> <p>Camus L, Andrade H, Aniceto AS, Aune M, Bandara K, Basedow SL, Christensen KH, Cook J, Daase M, Dunlop K, Falk-Petersen S, Fietzek P, Fonnes G, Ghaffari P, Gramvik G, Graves I, Hayes D, Langeland T, Lura H, Kristiansen T, Nøst OA, Peddie D, Pederick J, Pedersen G, Sperrevik AK, Sørensen K, Tassara L, Tjøstheim S, Tverberg V, Dahle S (2021). Autonomous Surface and Underwater Vehicles as Effective Ecosystem Monitoring and Research Platforms in the Arctic—The Glider Project. Sensors 21(20):6752. <a href="https://doi.org/10.3390/s21206752">https://doi.org/10.3390/s21206752</a></p> <p>Daase M (ed.). (2021). ARCTOS Barents Sea Polar Front May 2021 Cruise Report (1.1.0). Zenodo. <a href="https://doi.org/10.5281/zenodo.7384076">https://doi.org/10.5281/zenodo.7384076</a></p> <p>Edholm J. (2022). Sailbuoy DCPS. Zenodo. <a href="https://doi.org/10.5281/zenodo.6798056">https://doi.org/10.5281/zenodo.6798056</a></p> <p>Swart S, du Plessis MD, Thompson AF, Biddle LC, Giddy I, Linders T, Mohrmann M, Nicholson S (2020). Submesoscale fronts in the Antarctic marginal ice zone and their response to wind forcing. Geophysical Research Letters, 47, e2019GL086649. <a href="https://doi.org/10.1029/2019GL086649">https://doi.org/10.1029/2019GL086649</a></p> <p>Wullenweber N, Hole LR, Ghaffari P, Graves I, Tholo H, Camus L (2022). SailBuoy Ocean Currents: Low-Cost Upper-Layer Ocean Current Measurements. Sensors. 22(15):5553. <a href="https://doi.org/10.3390/s22155553">https://doi.org/10.3390/s22155553</a></p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.