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133 results for “self-organized”

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geo20/100

Self-Organizing Neural Networks in Organoids Reveal Principles of Forebrain Circuit Assembly

GEO Series GSE312396. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo20/100

YAP1 is essential for self-organized differentiation of pluripotent stem cells

GEO Series GSE214403. Homo sapiens. 26 samples. Type: Methylation profiling by genome tiling array; Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo20/100

The spatial self-organization within pluripotent stem cell colonies is continued in detaching aggregates (scRNA-Seq)

GEO Series GSE184603. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo20/100

Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps

GEO Series GSE89285. Mus musculus. 833 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenFeb 2019View details →
geo20/100

Synchronization of growth and self-organizing digit pattern by WNT signaling

GEO Series GSE275784. Mus musculus. 42 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenAug 2024View details →
geo20/100

Self-organizing human heart organoids with an autologous tissue-resident macrophage immune niche

GEO Series GSE280807. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo20/100

Self-organization and symmetry breaking in intestinal organoid development

GEO Series GSE115958. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2019View details →
geo20/100

YAP1 is essential for self-organized differentiation of pluripotent stem cells [DNAm]

GEO Series GSE214400. Homo sapiens. 13 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenFeb 2023View details →
geo20/100

Cadherins modulate the self-organizing potential of gastruloids

GEO Series GSE247511. Mus musculus. 83 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2024View details →
geo16/100

Cadherins modulate the self-organizing potential of gastruloids (re-analysis)

GEO Series GSE247510. Mus musculus. 0 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.

openGEO-OpenJul 2024View details →
geo16/100

Self-organization of pluripotent stem cells into reproducible early embryonic developmental patterns through epigenome editing

GEO Series GSE256138. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo16/100

Self-organized emergence of hyaline cartilage in hiPSC-derived multi-tissue organoids

GEO Series GSE184007. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo12/100

Notch coordinates self-organization of germ layers and axial polarity in cnidarian gastruloids

GEO Series GSE307733. Nematostella vectensis. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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