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371
datasets available to search
ShareScore release 0.9.0
Dataset results
371 results for “single cell genomics”
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops
GEO Series GSE281150. Homo sapiens. 829 samples. Type: Other.
Clonal Evolution of Acute Myeloid Leukemia Revealed by High-Throughput Single-Cell Genomics
GEO Series GSE156934. Homo sapiens. 40 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics]
GEO Series GSE111896. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Novel approach reveals genomic landscapes of single-strand DNA breaks with nucleotide resolution in human cells
GEO Series GSE139011. Mus musculus; Homo sapiens. 109 samples. Type: Other.
10X Genomics - Evaluation of single-Cell RNA Sequencing Platforms
GEO Series GSE142647. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Ensembles of genome-coverage single-cell histone modifications reveal epigenetic lineages during mouse preimplantation development II
GEO Series GSE259393. Mus musculus. 27 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (b23-mouse-brain)
GEO Series GSE285809. Mus musculus. 1 samples. Type: Other.
Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation [bulkCRISPR-screen]
GEO Series GSE274255. Homo sapiens; synthetic construct. 15 samples. Type: Other.
Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes.
GEO Series GSE216521. Mus musculus. 68 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-seq Reveals a Developmental Hierarchy and Oncogenic Networks for Initiation of Medulloblastoma [10x Genomics Chromium]
GEO Series GSE120966. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics sequencing revealed cytoskeleton defects led to human embryonic arrest characterized with zygotic genome activation
GEO Series GSE247678. Homo sapiens. 111 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Multiplex generation and single cell analysis of structural variants in mammalian genomes
GEO Series GSE282636. Homo sapiens; Mus musculus. 197 samples. Type: Other; Expression profiling by high throughput sequencing.
10X genomics single-cell RNA sequencing of the testicular Thy1+ spermatogonia in Foxc2f/+ and Foxc2f/-;Ddx4-cre mice
GEO Series GSE180729. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Concurrent whole-genome haplotyping and copy number profiling of single cells (Illumina)
GEO Series GSE60909. Homo sapiens. 164 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Genome-wide maps of nuclear lamina interactions in single human cells. (Hi-C, KBM7 haploid)
GEO Series GSE69841. Homo sapiens. 2 samples. Type: Other.
Engineered cell entry links receptor biology with single-cell genomics
GEO Series GSE212998. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing.
10x genomics single cell sequencing of yak hair follicle
GEO Series GSE205456. Bos grunniens. 3 samples. Type: Expression profiling by high throughput sequencing.
Multiplex generation and single cell analysis of structural variants in mammalian genomes [IVT-seq]
GEO Series GSE282633. Homo sapiens; Mus musculus. 20 samples. Type: Other.
Simultaneous single-cell three-dimensional genome and gene expression profiling Uncovers Dynamic Enhancer Connectivity Underlying Olfactory Receptor Choice [olfactory, single-cell RNA & Hi-C]
GEO Series GSE239969. Mus musculus. 822 samples. Type: Expression profiling by high throughput sequencing; Other.
Defining Cell Fate And Embryonic Genome Activation By Global Single-Cell cDNA Analysis of Blastomeres From 5-to 8-Cell Human Embryos.
GEO Series GSE22032. Homo sapiens. 53 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.