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736 results for “species differentiation”

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dryad36/100

Phenotypic plasticity versus ecotypic differentiation under recurrent summer drought in two drought-tolerant pine species

<p>1. Despite worldwide reports of high tree mortality, growing evidence indicates that many tree species are well adapted to survive repeated dry spells. The drought resilience of trees is related to their phenotypic plasticity and ecotypic differentiation. Whether these two mechanisms act at the same organisational level of a tree and involve similar plant traits is still unknown.</p> <p>2. We assessed phenotypic plasticity and ecotypic differentiation across four populations of Pinus sylvestris and Pinus nigra seedlings grown for three years under a recurrent summer drought treatment or well-watered control conditions in a common garden. We measured the response to the summer drought treatment of a total of 26 traits including shoot and needle morphology, needle anatomy, and foliar macronutrients, and related the traits to the growing season water deficit (GSWD) at the location of the seed origin.</p> <p>3. Foliar phenotypic plasticity in response to recurrent summer drought was surprisingly low, with the needle length and the fraction of mesophyll and phloem tissue adjusting to some extent. In comparison, shoot morphological traits were much more plastic in both species with predominant responses to the summer drought stress including shorter and less numerous apical and lateral shoots. These three traits were also correlated with GSWD at the seed origin, indicating local adaptation. In contrast, between-population variation of foliar morphological and anatomical traits, and macronutrients were mostly unrelated to the GSWD at the seed origin.</p> <p>4. Consequently, phenotypic plasticity and ecotypic differentiation occurred at the same level of organisation and in the same plant traits, i.e. shoot morphology. This combination of plasticity and ecotypic differentiation allowed P. sylvestris and P. nigra seedlings to rapidly acclimate to recurrent and long-lasting dry-spells.</p> <p>5. Synthesis: P. sylvestris and P. nigra seedlings showed considerable ecotypic differentiation and phenotypic plasticity of shoot morphological traits, and not foliar traits. Acclimation to recurrent severe summer drought was achieved by reducing shoot growth.</p>

opencc-zeroSep 2021View details →
dryad36/100

Plant species with higher chemical defenses enhance herbivore cellular immunity with differential effectiveness against two parasitoid species

<p>Insect herbivores simultaneously experience bottom-up effects of plant defensive chemistry and the top-down effects of natural enemies. At the intersection of these effects are herbivore immune systems, herbivore traits that have largely been overlooked in studies of plant-insect interactions. Most previous studies have demonstrated compromised immunity of herbivores that feed on plants with higher defensive chemistry. Many studies have used embedded microfilaments or silica beads as proxies for parasitoid eggs. Yet, parasitoids may evade or suppress host immune responses by injecting venom, calyx fluid, or through modifications of their egg surface structure, necessitating studies that include all three trophic levels to obtain a complete picture of how plant traits may modulate herbivore immunity.Here we examined the effect of host plant species that differ in glucosinolate (anti-herbivore compounds produced by plants in the Brassicaceae) concentrations on the immune status of an herbivore and its consequences for two species of parasitoids with different life history traits.We found that larvae of the butterfly Pieris rapae that fed on field mustard Brassica rapa, which contain 52-fold higher glucosinolate concentrations than collards B. oleracea, attained lower body weights and experienced prolonged development to adulthood.Yet, caterpillars that fed on B. rapa had enhanced cellular immunity, as measured by total and differential hemocyte counts, as well as melanization capacity compared to larvae that fed on B. oleracea.In turn, the likelihood that at least some eggs in clutches of the gregarious endoparasitoid Cotesia glomerata would be encapsulated, leading to a reduction in brood size, were three times greater when their host caterpillars fed on B. rapa compared to B. oleracea. Interestingly, eggs of the solitary endoparasitoid Cotesia rubecula were rarely encapsulated irrespective of the host plant on which their host caterpillar fed. Therefore, our results suggest that plant defense metabolites can influence the expression of herbivore immunity, but the effectiveness of this response strongly depends on the identity of the parasitoid and its ability to evade the caterpillar immune response, and possibly the evolution of these trophic interactions in non-native systems.</p>

opencc-zeroDec 2022View details →
dryad36/100

Spatial genetic differentiation correlates with species assemblage turnover across tropical reef fish lineages

<p><strong>Aim:</strong> Evaluating the similarity of diversity patterns across micro- to macroevolutionary scales in natural communities, such as species-genetic diversity correlations (SGDC), may inform on processes shaping community assembly. However, whether SGDCs not only hold across communities but also across lineages has never been explored so far. Here we investigated SGDCs across co-distributed taxa for different spatial components (α, β, γ), and formally tested the influence of dispersal traits on β SGDCs. <strong>Location:</strong> Western Indian Ocean</p> <p><strong>Time period:</strong> 2016–2017</p> <p><strong>Major taxa studied:</strong> Tropical reef fish species with contrasting dispersal traits</p> <p><strong>Methods:</strong> Using ddRADseq single nucleotide polymorphism (SNP) data for 20 tropical reef fishes and distribution data of 2,446 species belonging to 12 families, we analysed the correlations between within-species genetic diversity and within-family species diversity (i.e., lineage diversity) for the three spatial components (α, β, γ SGDCs). We then related the strength of β-SGDCs per species to proxies of larval dispersal abilities.</p> <p><strong>Results:</strong> We detected positive and significant lineage-based SGDC only for the β component, i.e., the families showing the greatest level of species turnover among sites contains the species with the greatest levels of genetic differentiation. We showed that the Monsoon drift mainly explained the β diversity patterns at both intraspecific and interspecific levels. Higher β-SGDCs were found for species with short pelagic larval duration and weak larval swimming capacity.</p> <p><strong>Main conclusions:</strong> Our study reveals a strong correlation between genetic and species β diversity, a result explained by the presence of a 'soft' barrier and mediated by larval dispersal processes. This suggests that vicariance and dispersal limitation are major processes shaping β-diversity patterns from microevolutionary to macroevolutionary scales in tropical reef fishes.</p>

opencc-zeroJan 2023View details →
dryad36/100

Genomic evidence for contrasting patterns of host‐associated genetic differentiation across shared host‐plant species in leaf‐ and bud‐galling sawflies

<p>Resource specialization and host-associated genetic differentiation (HAD) are frequently invoked as an explanation for the high diversity of plant-feeding insects and other organisms with a parasitic lifestyle. While genetic studies have demonstrated numerous examples of HAD in insect herbivores, the general rarity of comparative studies means that we still lack an understanding of how deterministic HAD is, and whether patterns of host shifts can be predicted over evolutionary time scales. We applied genome-wide SNP data obtained through low-coverage genome resequencing to define species limits and to compare host-plant use in population samples of leaf- and bud-galling sawflies collected from seven shared willow (<em>Salix</em>) host species. To infer the repeatability of long-term cophylogenetic patterns, we also contrasted the phylogenies of the two galler groups with each other as well as with the phylogeny of their <em>Salix</em> hosts estimated based on RADseq data. We found clear evidence for host specialization and HAD in both of the focal galler groups, but also that leaf gallers are more specialized to single host species than are most bud gallers. In contrast to bud gallers, leaf gallers also exhibit statistically significant cophylogenetic signal with their <em>Salix</em> hosts. The observed discordant patterns of resource specialization and long-term host use in two related galler groups that have radiated in parallel across a shared resource base indicate a general lack of evolutionary repeatability and suggest that short- and long-term host use and ecological diversification in plant-feeding insects are dominated by stochasticity and/or lineage-specific effects.</p>

opencc-zeroFeb 2023View details →
zenodo36/100

DATASET: Temperature Differentially Influences the Capacity of Trichoderma Species to Induce Plant Defense Responses in Tomato Against Insect Pests

<p>Species of the ecological opportunistic, avirulent fungus,&nbsp;<em>Trichoderma</em>&nbsp;are widely used in agriculture for their ability to protect crops from the attack of pathogenic fungi and for plant growth promotion activity. Recently, it has been shown that they may also have complementary properties that enhance plant defense barriers against insects. However, the use of these fungi is somewhat undermined by their variable level of biocontrol activity, which is influenced by environmental conditions. Understanding the source of this variability is essential for its profitable and wide use in plant protection. Here, we focus on the impact of temperature on&nbsp;<em>Trichoderma afroharzianum</em>&nbsp;T22,&nbsp;<em>Trichoderma atroviride</em>&nbsp;P1, and the defense response induced in tomato by insects. The&nbsp;<em>in vitro</em>&nbsp;development of these two strains was differentially influenced by temperature, and the observed pattern was consistent with temperature-dependent levels of resistance induced by them in tomato plants against the aphid,&nbsp;<em>Macrosiphum euphorbiae</em>, and the noctuid moth,&nbsp;<em>Spodoptera littoralis</em>. Tomato plants treated with&nbsp;<em>T. afroharzianum</em>&nbsp;T22 exhibited enhanced resistance toward both insect pests at 25&deg;C, while&nbsp;<em>T. atroviride</em>&nbsp;P1 proved to be more effective at 20&deg;C. The comparison of plant transcriptomic profiles generated by the two&nbsp;<em>Trichoderma</em>&nbsp;species allowed the identification of specific defense genes involved in the observed response, and a selected group was used to assess, by real-time quantitative reverse transcription PCR (qRT-PCR), the differential gene expression in&nbsp;<em>Trichoderma</em>-treated tomato plants subjected to the two temperature regimens that significantly affected fungal biological performance. These results will help pave the way toward a rational selection of the most suitable&nbsp;<em>Trichoderma</em>&nbsp;isolates for field applications, in order to best face the challenges imposed by local environmental conditions and by extreme climatic shifts due to global warming.</p>

opencc-by-4.0Dec 2021View details →
zenodo36/100

Dataset on biomarkers for the project "Intermittent hypoxia differentially affects metabolic and oxidative stress responses in two species of cyprinid fish"

<p>The file contains the data for the tissue-level biomarkers evaluating the impact of short-term hypoxia on oxidative stress and metabolic parameters in silver carp <em>Hypophthalmichthys molitrix </em>and gibel carp <em>Carassius gibelio.</em></p>

opencc-by-sa-4.0Aug 2023View details →
dryad36/100

Hetaerina SNPs data for: Genomic differentiation and niche divergence in the Hetaerina americana (Odonata) cryptic species complex

<p class="MsoNormalCxSpFirst"><span>The evolution of reproductive barriers, that is, the speciation process, implies the limitation of gene flow between populations. Different patterns of genomic differentiation throughout the speciation continuum may provide insights into the causal evolutionary forces of species divergence. In this study, we analyzed a cryptic species complex of the genus <em>Hetaerina</em> (Odonata). This complex includes <em>H. americana</em> and <em>H. calverti</em>; however, in <em>H. americana</em>, two highly differentiated genetic groups have been previously detected, which, we hypothesize, may correspond to different species with low morphological variation. We obtained single nucleotide polymorphism (SNP) data for 90 individuals belonging to the different taxa in the complex and carried out differentiation tests to identify genetic isolation. The results from STRUCTURE and discriminant analysis of principal components (DAPC), based on almost 5,000 SNPs, confirmed the presence of three highly differentiated taxa. Also, we found <em>F</em><sub>ST </sub>values above 0.5 in pairwise comparisons, which indicates a considerable degree of genetic isolation among the suggested species. We also found </span><span>low climatic niche overlap among all taxa, suggesting that each group occurs at specific conditions of temperature, precipitation and elevation</span><span>. We propose that <em>H. americana</em> comprises two cryptic species, which may be reproductively isolated by ecological barriers related to niche divergence, since the morphological variation is minimal and, therefore, mechanical barriers are probably less effective compared to other related species such as <em>H. calverti</em>.</span></p>

opencc-zeroOct 2023View details →
dryad36/100

Ecological niche differentiation mediates near-complete premating reproductive isolation within the <em>Gladiolus carneus</em> (Iridaceae) species complex

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publicSep 2025View details →
dryad36/100

Even more oak species in Mexico? Genetic structure and morphological differentiation support the presence of at least two specific entities within Quercus laeta

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publicDec 2021View details →
dryad36/100

Data from: Differential effects of pollen nutritional quality on male and female reproductive success across plant species within a diverse co-flowering community

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publicOct 2024View details →
dryad36/100

Data from: Genetic differentiation associated with host plants and geography among six widespread species of South American Blepharoneura fruit flies (Tephritidae)

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publicJan 2017View details →
dryad36/100

Genomic evidence for contrasting patterns of host‐associated genetic differentiation across shared host‐plant species in leaf‐ and bud‐galling sawflies

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publicFeb 2023View details →
dryad36/100

Data from: Genomic islands of differentiation in two songbird species reveal candidate genes for hybrid female sterility

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publicDec 2017View details →
dryad36/100

Data from: A multivariate study of differentiating characters between three European species of the genus Lasiochernes Beier, 1932 (Pseudoscorpiones, Chernetidae)

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publicNov 2017View details →
dryad36/100

Data from: Nitrogen fertilization differentially enhances nodulation and host growth of two invasive legume species in an urban environment

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publicOct 2018View details →
dryad36/100

Phenotypic plasticity versus ecotypic differentiation under recurrent summer drought in two drought-tolerant pine species

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publicSep 2021View details →
dryad36/100

Data from: Differential adaptation to a harsh granite outcrop habitat between sympatric Mimulus species

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publicMar 2018View details →
dryad36/100

Forest cover and fruit crop size differentially influence frugivory of select rainforest tree species in Western Ghats, India (Part I)

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publicMar 2021View details →
dryad36/100

Depleted lean body mass after crossing an ecological barrier differentially affects stopover duration and refueling rate among species of long-distance migratory birds

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publicOct 2022View details →
dryad36/100

Plant species with higher chemical defenses enhance herbivore cellular immunity with differential effectiveness against two parasitoid species

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publicFeb 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

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abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
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DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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