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165
datasets available to search
ShareScore release 0.9.0
Dataset results
165 results for “specific diversity”
Unravelling the sex-specific diversity and functions of adrenal gland macrophages
GEO Series GSE203097. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Tumor type and cell type-specific gene expression alterations in diverse pediatric central nervous system tumors identified using single nuclei RNA-seq
GEO Series GSE211362. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
Differential 3’ Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types
GEO Series GSE108480. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
The marked diversity of unique cortical enhancers enables the generation of neuron-specific tools by Enhancer-Driven Gene Expression (EDGE)
GEO Series GSE112897. Mus musculus. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transfer learning of an in vivo-derived senescence signature identifies conserved tissue-specific senescence across species and diverse pathologies [bulk RNA-seq]
GEO Series GSE199864. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Fingerprinting the Asterid species using subtracted diversity array reveals novel species-specific sequences.
GEO Series GSE31242. Codonopsis; Valeriana officinalis; Taraxacum officinale; Lonicera japonica; Lycium barbarum; Leonurus cardiaca; Sambucus nigra; Camellia sinensis; Coffea arabica; Angelica archangelica; Vitex agnus-castus; Trachelospermum jasminoides; asterids; Rehmannia glutinosa; Cornus; Achillea millefolium; Impatiens; Tetrapanax papyrifer; Scrophularia nodosa; Gardenia jasminoides; Forsythia suspensa; Withania somnifera; Ilex paraguariensis; Embryophyta; Digitalis purpurea; Platycodon grandiflorus; Symphytum. 27 samples. Type: Genome variation profiling by array.
Anchored screening identifies transcription factor blueprints underlying dendritic cell diversity and subset-specific anti-tumor immunity [mouse bulk RNA-seq]
GEO Series GSE293874. Mus musculus. 167 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Circle-seq unveils diversity and cell specificity of circular DNA in single cells
GEO Series GSE221884. Homo sapiens. 344 samples. Type: Expression profiling by high throughput sequencing; Other.
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
GEO Series GSE32883. Homo sapiens. 90 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Niche-Specific Re-Programming of Epigenetic Landscapes Drives Myeloid Cell Diversity in NASH [scRNA-seq]
GEO Series GSE128334. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Tumor type and cell type-specific gene expression alterations in diverse pediatric central nervous system tumors identified using single nuclei RNA-seq
GEO Series GSE241396. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
Subpopulation-specific transcriptome analysis of cytometrically sorted Streptococcus mutans cells: Analysis of CSP-mediated intrapopulation diversity
GEO Series GSE25284. Streptococcus mutans UA159; Streptococcus mutans. 6 samples. Type: Expression profiling by array.
Cell type-specific network analysis in Diversity Outbred mice identifies genes potentially responsible for human bone mineral density GWAS associations
GEO Series GSE269583. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Data from: Evolutionary processes driving spatial patterns of intra-specific genetic diversity in river ecosystems
Describing, understanding and predicting the spatial distribution of genetic diversity is a central issue in biological sciences. In river landscapes, it is generally predicted that neutral genetic diversity should increase downstream, but there have been few attempts to test and validate this assumption across taxonomic groups. Moreover, it is still unclear what are the evolutionary processes that may generate this apparent spatial pattern of diversity. Here, we quantitatively synthesized published results from diverse taxa living in river ecosystems, and we performed a meta-analysis to show that a downstream increase in intraspecific genetic diversity (DIGD) actually constitutes a general spatial pattern of biodiversity that is repeatable across taxa. We further demonstrated that DIGD was stronger for strictly waterborne dispersing than for overland dispersing species. However, for a restricted data set focusing on fishes, there was no evidence that DIGD was related to particular species traits. We then searched for general processes underlying DIGD by simulating genetic data in dendritic-like river systems. Simulations revealed that the three processes we considered (downstream-biased dispersal, increase in habitat availability downstream and upstream-directed colonization) might generate DIGD. Using random forest models, we identified from simulations a set of highly informative summary statistics allowing discriminating among the processes causing DIGD. Finally, combining these discriminant statistics and approximate Bayesian computations on a set of twelve empirical case studies, we hypothesized that DIGD were most likely due to the interaction of two of these three processes and that contrary to expectation, they were not solely caused by downstream-biased dispersal.
Assessment of Hepatitis B Virus Intra-host Population and Host-specific Immune Marker Diversity
ClinicalTrials.gov study NCT02148562. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Human γδ T cells in diverse tissues exhibit site-specific maturation dynamics across the life span
GEO Series GSE240858. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell lineage mapping of a diverse virus-specific naïve CD4 T cell repertoire
GEO Series GSE158896. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Diverse Non-Genetic Allele Specific Expression Effects Shape Genetic Architecture at the Cellular Level in the Mammalian Brain [HybridMouseDRN]
GEO Series GSE93787. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing.
Data from: Evolutionary processes driving spatial patterns of intra-specific genetic diversity in river ecosystems
Open the record for dataset details and reuse information.
T cell-intrinsic VISTA deficiency dampens the efficacy of CTLA4 blockade by limiting TCR repertoire diversity and effector function of tumor specific CD8+ cytotoxic T cells
GEO Series GSE290660. Mus musculus. 4 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.