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1,411
datasets available to search
ShareScore release 0.9.0
Dataset results
1,411 results for “Cell States”
Genome-wide maps of chromatin state in AML12 cells [ChIP-Seq]
GEO Series GSE200241. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A Mesenchymal Tumor Cell State Confers Increased Dependency on the Bcl-xL Anti-apoptotic Protein in Kidney Cancer
GEO Series GSE173618. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma. [ATAC-Seq, cell line]
GEO Series GSE308957. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells [ChIP-seq]
GEO Series GSE107147. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cerebral Cavernous Malformation Proteins and MEKK3 Coordinately Modulate SMURF1 Abundance to Control RhoA-dependent Endothelial Cell Phenotypic State
GEO Series GSE112882. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing.
Characterisation of chromatin states in erythroid cells from a patient with a unique severe HbH genotype (ATAC-Seq)
GEO Series GSE149794. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Translation State Array Analysis of TNF Stimulated Human Endothelial Cells
GEO Series GSE5354. Homo sapiens. 4 samples. Type: Expression profiling by array.
High-throughput RNA seq data of mouse embryonic stem cells and intermediate states throughout their differentiation into motor neurons
GEO Series GSE106526. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of chromatin state in YTHDF2 kockdown(KD) and wildtype(WT) cells in Multiple Myeloma
GEO Series GSE163138. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bromodomain of CREBBP/EP300 cooperates with BNC2 to reprogram cell state in breast cancer
GEO Series GSE276326. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profile of vegetative and cyst cells states of Azospirillum brasilense sp7
GEO Series GSE104188. Azospirillum brasilense. 6 samples. Type: Expression profiling by high throughput sequencing.
Translation State Array Analysis of Histamine Stimulated Human Endothelial Cells
GEO Series GSE5385. Homo sapiens. 4 samples. Type: Expression profiling by array.
Cell State Dependent Alteration of Melanoma Plasticity and Immunity by the Circadian Transcription Factor Bmal1 [ChIP-Seq]
GEO Series GSE202288. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of TBX1 state in transfected BCPAP cells
GEO Series GSE111072. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancer grammar of liver cell types and hepatocyte zonation states [cell_lines_ATAC]
GEO Series GSE236123. Homo sapiens; Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Identification of drug-resistance-related cell states in paired pre- and post-treatment neuroblastoma cell lines
For more information, including a more complete description, data generator contact information, and reference, please see: https://scpca.alexslemonade.org/projects/SCPCP000020.
Identification of drug-resistance-related cell states in paired pre- and post-treatment neuroblastoma PDXs
For more information, including a more complete description, data generator contact information, and reference, please see: https://scpca.alexslemonade.org/projects/SCPCP000024.
Capture of germ-line competent stem cells between rosette-stage and formative pluripotent states
GEO Series GSE269324. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Metformin treatment reduces oxidative stress state of RNASEH2-mutated Aicardi-Goutières patients-derived Lymphoblastoid Cell Lines
<p>The database includes the raw data of the article “Metformin treatment reduces oxidative stress state of RNASEH2-mutated Aicardi-Goutières patients-derived Lymphoblastoid Cell Lines”. Aim of this work was was to examine the impact of metformin treatment on the oxidative stress state of lymphoblastoid cell lines (LCLs) carrying mutation in RNASEH2B and RNASEH2A AGS related genes and healthy control. The database contains the data obtained by the following evaluations: a) Flow cytometry analysis for the evaluation of ROS release; b) Immunofluorescence for the evaluation of the stress-induced DNA damage by the quantification of the 8-OxoG level and changes of altered membrane potential by the quantification of monomeric and aggregated JC-1 dye; c) RT-qPCR for the evaluation of the expression level of FOXO3-related pathway.</p> <p>We demonstrated that metformin is able to highly reduce ROS overproduction especially in RNASEH2B-mutated LCLs, to restore the impaired mitochondrial membrane potential and strongly reduce the oxidative DNA damage by reducing the 8-oxoG level in AGS patients. We demonstrated that the beneficial effect of metformin associate with the upregulation of FOXO3-related signaling pathway. Metformin treatment seem to represents a possible therapeutic approach, useful to ameliorate the oxidative stress-related inflammatory condition observed in AGS subjects.</p>
Phenotypical states modulate sensitivity and transcriptional reprogramming in patient-derived glioblastoma cells in response to temozolomide and radiation therapy. [RNA-Seq]
GEO Series GSE249544. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.