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Data from: Responses of aerial insectivorous bats to local and landscape-level features of coffee agroforestry systems in Western Ghats, India
Shade coffee has shown great promise in providing crucial habitats for biodiversity outside formal protected areas. Insectivorous bats have been understudied in coffee, although they may provide pest control services. We investigated the influence of local and landscape-level features of coffee farms on aerial insectivorous bats in Chikmagalur district in the Western Ghats biodiversity hotspot, India. Bats were monitored in 20 farm sites using ultrasound detectors, and the response of bat species richness and activity to changes in tree density, proportion of built-up area in the neighborhood, and distance of farm from forest areas quantified. We examined if models built to explain the species richness and activity could also predict them in nine additional sites. We detected nine phonic types/species in the study area. The quantified predictors had no effect on assemblage-level species richness and activity of bats. Responses of edge-space and cluttered-space forager guilds mirrored those of the overall assemblage, but some species vulnerable to forest conversion like *Rhinolophus beddomei* were detected rarely. Best models explained up to 20% and 15% variation in assemblage-level species richness and activity respectively, and were poor predictors of both response variables. We conclude that coffee farms in our study area offer an important commuting space for insectivorous bats across a gradient of shade management. Further research should include species-specific responses to management decisions for at-risk species and quantification of ecosystem services like natural pest control to inform biodiversity conservation initiatives in the Western Ghats coffee landscapes.
Data from: Prey size and dietary niche of Rafinesque's big-eared bat (Corynorhinus rafinesquii)
Bats in the genus Corynorhinus possess a suite of morphological characters that permit them to effectively use both gleaning and aerial-hawking foraging strategies to capture Lepidoptera. Consequently, they occupy a specialized feeding niche within North American bat assemblages and are of particular interest for dietary studies. We collected fecal pellets from a colony of C. rafinesquii (Rafinesque's Big-Eared Bat) at Mammoth Cave National Park during August–October 2011 and amplified cytochrome-c oxidase subunit 1 fragments of prey from these pellets. We used the Barcode of Life Database to identify prey, and evaluated the size of prey species based on published values. The mean wingspan of prey we recorded from our samples was smaller than average values reported for Rafinesque's Big-Eared Bat using traditional methods (P ≤ 0.01), suggesting that surveys of culled insect parts beneath roosting sites may lead to biased estimates of the size and breadth of prey species eaten by gleaning bats. Mean wingspan of lepidopteran prey consumed by Rafinesque's Big-Eared Bat in our study was larger (P ≤ 0.01) than values reported for the Myotis septentrionalis (Northern Long-Eared Bat ), which is a smaller, sympatric gleaner in eastern North America. Further, comparisons of our diet data with abundance of prey suggest macrolepidopteran taxa are consistently consumed by Rafinesque's Big-Eared Bat to greater degree than microlepidotera. Our findings suggest that North American Corynorhinus consume a wider range of sizes and species of Lepidoptera than previously reported in studies based solely on identification of culled prey-wings beneath feeding roosts.
Data from: Habitat usage of Daubenton's bat (Myotis daubentonii), common pipistrelle (Pipistrellus pipistrellus), and soprano pipistrelle (Pipistrellus pygmaeus) in a North Wales upland river catchment
Distributions of Daubenton's bat (Myotis daubentonii), common pipistrelle, (Pipistrellus pipistrellus), and soprano pipistrelle (Pipistrellus pygmaeus) were investigated along and altitudinal gradient of the Lledr River, Conwy, North Wales, and presence assessed in relation to the water surface condition, presence/absence of bank‐side trees, and elevation. Ultrasound recordings of bats made on timed transects in summer 1999 were used to quantify habitat usage. All species significantly preferred smooth water sections of the river with trees on either one or both banks; P. pygmaeus also preferred smooth water with no trees. Bats avoided rough and cluttered water areas, as rapids may generate high‐frequency echolocation‐interfering noise and cluttered areas present obstacles to flight. In lower river regions, detections of bats reflected the proportion of suitable habitat available. At higher elevations, sufficient habitat was available; however, bats were likely restricted due to other factors such as a less predictable food source. This study emphasizes the importance of riparian habitat, bank‐side trees, and smooth water as foraging habitat for bats in marginal upland areas until a certain elevation, beyond which bats in these areas likely cease to forage. These small‐scale altitudinal differences in habitat selection should be factored in when designing future bat distribution studies and taken into consideration by conservation planners when reviewing habitat requirements of these species in Welsh river valleys, and elsewhere within the United Kingdom.
Data from: Malagasy bats shelter a considerable genetic diversity of pathogenic Leptospira suggesting notable host-specificity patterns
Pathogenic Leptospira are the causative agents of leptospirosis, a disease of global concern with major impact in tropical regions. Despite the importance of this zoonosis for human health, the evolutionary and ecological drivers shaping bacterial communities in host reservoirs remain poorly investigated. Here, we describe Leptospira communities hosted by Malagasy bats, composed of mostly endemic species, in order to characterize host–pathogen associations and investigate their evolutionary histories. We screened 947 individual bats (representing 31 species, 18 genera and seven families) for Leptospira infection and subsequently genotyped positive samples using three different bacterial loci. Molecular identification showed that these Leptospira are notably diverse and include several distinct lineages mostly belonging to Leptospira borgpetersenii and L. kirschneri. The exploration of the most probable host-pathogen evolutionary scenarios suggests that bacterial genetic diversity results from a combination of events related to the ecology and the evolutionary history of their hosts. Importantly, based on the data set presented herein, the notable host-specificity we have uncovered, together with a lack of geographical structuration of bacterial genetic diversity, indicates that the Leptospira community at a given site depends on the co-occurring bat species assemblage. The implications of such tight host-specificity on the epidemiology of leptospirosis are discussed.
Data from: Quantifying the damage caused by fruit bats to backyard lychee trees in Mauritius and evaluating the benefits of protective netting
The Mauritius fruit bat (Pteropus niger) has been the subject of repeated culling campaigns, apparently in response to pressure from the fruit-growing industry concerned over damage to commercially valuable orchard crops such as lychees. More than 31,000 fruit-bearing lychee trees also exist in private backyards making this an issue pertinent to a wide cross-section of the Mauritian general public and not just those involved in commercial fruit production. The level of damage caused by bats to fruit crops is often debated and the low number of robust damage assessment studies hampers mitigation efforts. During the fruiting season of 2016/2017, we assessed the damage among backyard lychee trees attributable to fruit bats and other causes around Vacoas-Phoenix, Central Mauritius and evaluated the impact of using protective netting as a mitigation strategy. Fruit yield from panicles that were protected from depredation by nylon netting was approximately one third greater than that from unprotected panicles. We suspect that fruit bats were responsible for approximately 42% of the total damage but illustrate the difficulties in attributing damage to a single cause in such assessments. Although we demonstrate the value of protective netting we recognize that barriers to implementation exist and that a more holistic approach that incorporates crop protection, forest restoration strategies and addresses negative public attitudes towards bats in general is required to ensure the persistence of this endemic species.
Data from: Social structure of the harem-forming promiscuous fruit bat, Cynopterus sphinx, is the harem truly important?
Bats are social animals and display a diverse variety of mating and social systems, with most species exhibiting some form of polygyny. Their social organization is fluid and individuals frequently switch partners and roosting sites. While harem-like social organization is observed in multiple tropical species, its importance is contested in many of them. In this study, we investigated the role of harems in the social organization of the old world fruit bat Cynopterus sphinx. Based on regular behavioural observations over a period of 20 months and genetic data from microsatellite markers, we observed that the social organization is flexible, individuals regularly shift between roosts and the social organization resembles a fission–fusion society. Behavioural and genetic analyses suggest that the harems are not strict units of social structure, and the colony does not show signatures of subdivision with harems as behavioural units. We also observed that there was no correlation between individuals with high association index and pairwise relatedness. Our findings indicate that similar to the mating system, the social organization of C. sphinx can also be categorized as a fission–fusion society, and hence the term 'harem' is a misnomer. We conclude that the social system of C. sphinx is flexible, with multi-male multi-female organization, and individuals tend to be loyal to a given area rather than a roost.
Data from: Female-biased dispersal in a bat with a female-defence mating strategy
The ultimate causes for predominant male-biased dispersal (MBD) in mammals and female-biased dispersal (FBD) in birds are still subject to much debate. Studying exceptions to general patterns of dispersal, for example, FBD in mammals, provides a valuable opportunity to test the validity of proposed evolutionary pressures. We used long-term behavioural and genetic data on individually banded Proboscis bats (Rhynchonycteris naso) to show that this species is one of the rare mammalian exceptions with FBD. Our results suggest that all females disperse from their natal colonies prior to first reproduction and that a substantial proportion of males are philopatric and reproduce in their natal colonies, although male immigration has also been detected. The age of females at first conception falls below the tenure of males, suggesting that females disperse to avoid father–daughter inbreeding. Male philopatry in this species is intriguing because Proboscis bats do not share the usual mammalian correlates (i.e. resource-defence polygyny and/or kin cooperation) of male philopatry. They have a mating strategy based on female defence, where local mate competition between male kin is supposedly severe and should prevent the evolution of male philopatry. However, in contrast to immigrant males, philopatric males may profit from acquaintance with the natal foraging grounds and may be able to attain dominance easier and/or earlier in life. Our results on Proboscis bats lent additional support to the importance of inbreeding avoidance in shaping sex-biased dispersal patterns and suggest that resource defence by males or kin cooperation cannot fully explain the evolution of male philopatry in mammals.
Data from: Origin, acquisition and diversification of heritable bacterial endosymbionts in louse flies and bat flies
The γ-proteobacterium Arsenophonus and its close relatives (Arsenophonus and like organisms, ALOs) are emerging as a novel clade of endosymbionts, which are exceptionally widespread in insects. The biology of ALOs is, however, in most cases entirely unknown, and it is unclear how these endosymbionts spread across insect populations. Here, we investigate this aspect through the examination of the presence, the diversity and the evolutionary history of ALOs in 25 related species of blood-feeding flies: tsetse flies (Glossinidae), louse flies (Hippoboscidae) and bat flies (Nycteribiidae and Streblidae). While these endosymbionts were not found in tsetse flies, we identify louse flies and bat flies as harbouring the highest diversity of ALO strains reported to date, including a novel ALO clade, as well as Arsenophonus and the recently described Candidatus Aschnera chinzeii clade. We further show that the origin of ALO endosymbiosies extends deep into the evolutionary past of louse flies and bat flies, and that it likely played a major role in the ecological specialization of their hosts. The evolutionary history of ALOs is notably complex and was shaped by both vertical transmission and horizontal transfers with frequent host turnover and apparent symbiont replacement in host lineages. In particular, ALOs have evolved repeatedly and independently close relationships with diverse groups of louse flies and bat flies, as well as phylogenetically more distant insect families, suggesting that ALO endosymbioses are exceptionally dynamic systems.
Data from: The Chirocopter: a UAV for recording sound and video of bats at altitude
1. Most recordings of bats are conducted with fixed equipment, which relies on opportunistic data collection. Unmanned aerial vehicles (such as drones) are considered inappropriate for recording bats due to ultrasound noise constraints. 2. We developed a UAV system that physically isolates UAV noise so we can record, with 3D maneuverability, ultrasonic audio and spatial thermal data of bat flight at altitude. 3. We tested the noise of our UAV with various payloads and microphone configurations to characterize the ultrasonic noise of our system, physically isolate drone noise from the microphone, and maximize UAV flight performance. 4. Over 84 minutes of recordings, we captured 3,847 echolocation signals from bats with corresponding thermal data of bat flight. Our system provides a feasible mechanism to capture both acoustic and video data of bats aloft at flexible locations and altitudes. 5. We include information on how to extend our method to apply to acoustic recordings in the audible (20 Hz-20 kHz) range for recording sounds of other taxa.
Data from: Beyond size – morphological predictors of bite force in a diverse insectivorous bat assemblage from Malaysia
1. Bite force is used to investigate feeding performance in a variety of vertebrates. In all taxa studied, bite force is strongly correlated with body and head size. Studies of bite force in bats have largely centred on neotropical species with a particular focus on species that maximize dietary differences. Little is known about the bite force of bats from the Old World tropics, nor of variation in bite force within diverse assemblages of obligate insectivores. Moreover, factors other than size are poorly known but may be important in driving interspecific differences in bite force, and thereby diet. 2. Here, we examine the correlation between morphological variation and bite force of 35 species of insectivorous bats from a single palaeotropical assemblage. We confirmed the overall relationship between size and bite force across species, but found that bite force is predicted more strongly by head length than body mass or forearm length. 3. From the combined action of jaw muscles and muscle-bone mechanisms, bats generate a mechanical advantage that creates pressure during biting. We calculated the size-independent mechanical advantage for each of five mandible lever systems (three delineated by the temporalis muscle and two delineated by the masseter muscle) operating through three function points (molar, canine, and incisor). Size-independent mechanical advantage of the suprazygomatic portion of the temporalis muscle at the molar function point was the only significant predictor of size-independent maximum bite force across all species. 4. Within families, the size-independent mechanical advantage of the superficial portion of the masseter muscle plays a significant role in predicting size-independent maximum bite force in both the Rhinolophidae and Vespertilionidae. For the family Hipposideridae, however, size-independent mechanical advantage showed no role in predicting size-independent maximum bite force, suggesting that size really matters in predicting the maximum bite force capacity for this family.
Pollination by bats enhances both quality and yield of a major cash crop in Mexico
<ol> <li>We used exclusion experiments to determine the effect of different pollinator taxa on the yield and quality of pitayas (fruit of <i>Stenocereus queretaroensis</i> (F.A.C. Weber) Buxbaum), a major crop in central Mexico. We studied the three most economically important cultivars and wild individuals in the principal region for pitaya production. For each pollinator taxa we recorded fruit set and measured three key parameters of fruit quality: weight, sucrose concentration and seed set.</li> <li>When bats were excluded from flowers and flowers were pollinated by other taxa (i.e. diurnal birds and insects), pitaya yield decreased by 35%, though pollination dependence varied between cultivars. Fruit quality decreased significantly in the absence of bat pollination across all cultivars, with fruits 46% lighter and 13% less sweet when pollinated by other taxa, thus reducing economic value as size determines market price. Additionally, seed set (an indicator of effective pollination) was significantly lower in the absence of bat pollinators.</li> </ol>
Data from: Does sex matter? Gender-specific responses to forest fragmentation in Neotropical bats
Understanding the consequences of habitat modification on wildlife communities is central to the development of conservation strategies. However, albeit male and female individuals of numerous species are known to exhibit differences in habitat use, sex-specific responses to habitat modification remain little explored. Here, we used a landscape-scale fragmentation experiment to assess, separately for males and females, the effects of fragmentation on the abundance of Carollia perspicillata and Rhinophylla pumilio, two widespread Neotropical frugivorous bats. We predicted that sex-specific responses would arise from higher energetic requirements from pregnancy and lactation in females. Analyses were conducted independently for each season, and we further investigated the joint responses to local and landscape-scale metrics of habitat quality, composition, and configuration. Although males and females responded similarly to a fragmentation gradient composed by continuous forest, fragment interiors, edges, and matrix habitats, we found marked differences between sexes in habitat use for at least one of the seasons. Whereas the sex ratio varied little in continuous forest and fragment interiors, females were found to be more abundant than males in edge and matrix habitats. This difference was more prominent in the dry season, the reproductive season of both species. For both species, abundance responses to local- and landscape-scale predictors differed between sexes and again, differences were more pronounced in the dry season. The results suggest considerable sex-mediated responses to forest disruption and degradation in tropical bats and complement our understanding of the impacts of fragmentation on tropical forest vertebrate communities.
Data from: "Genome-wide microsatellite marker development from next-generation sequencing of two non-model bat species impacted by wind turbine mortality: Lasiurus borealis and L. cinereus (Vespertilionidae)" in Genomic Resources Notes accepted 1 October 2013 to 30 November 2013
Tree-roosting bats in the genus Lasiurus are widespread, migratory species that have not been well characterized for population genetic diversity and structure due to a lack of genetic resources. Generating genetic resources in Lasiurus is made pressing by the need for conservation genetic assessments of demographic trends in this genus, which comprise a large percentage of bat mortalities at wind turbine sites across North America. We report on marker development from whole-genome Illumina sequencing of the red bat (Lasirus borealis) and the hoary bat (L. cinereus). We generated paired-end libraries for a single individual of each species, sequenced on the Illumina HiSeq platform. We mapped a total of 46.6 million reads to the Myotis lucifigus reference genome, and used bioinformatics searches to identify tends of thousands of simple sequence repeats (SSRs) distributed across the bat genome. We selected 48 candidate microsatellite loci to develop cross-species primer sequences for Lasiurus, assembled these into multiplex combinations, and tested for amplification and polymorphism levels in a sample of 23 individuals from each of L. borealis and L. cinereus. In total, we identified 42 highly polymorphic loci that could be robustly amplified and scored, the majority of which (39) were also combinable into highly multiplexed assays of 4-8 loci each. The combination of new genomic sequence assemblies, a large set of highly polymorphic microsatellite loci, and the ability to efficiently multiplex represents a significant contribution to the genetic resources available for population and comparative genetic studies of bats.
Data from: Ecosystem services and disservices by birds, bats and monkeys change with macadamia landscape heterogeneity
1.The relative importance of ecosystem services and disservices can change with landscape structure in a poorly understood way. 2.We compare the impact of biocontrol, provided by bats and birds, with that of crop raiding by vervet monkeys on yield in South African macadamia orchards. Insectivorous bats and birds are known to feed on macadamia pest insect species, like the macadamia nut borer or the green vegetable bug. Vervet monkeys move into the orchards during the day to feed on premature macadamia nuts. Bats, birds and monkeys benefit from patches of natural vegetation adjacent to orchards. 3.With exclusion experiments (four treatments: day, night, day & night, control) we quantified the relative importance of biocontrol and crop raiding on yield, comparing two different landscape settings of the orchards, a natural and a human‐modified. 4.Crop raiding occurred only close to natural vegetation and caused yield losses of about 26%. Biocontrol by bats and birds was higher near natural vegetation, but still significant in human‐modified landscapes, at up to 530m distance to forest patches. Prevented biocontrol through the exclusion of bats and birds resulted in yield losses of up to 60%. 5.Effects of biocontrol by bats and birds (USD ~5000/ha/yr) were economically more important than the losses of crop raiding (USD ~1600/ha/yr). As both are linked to the vicinity of forest patches, the removal of natural vegetation to limit monkey abundances would also limit biocontrol service provision. 6.Synthesis and applications. This study highlights the high economic benefits of biocontrol by bats and birds, which outweighed negative impacts through yield losses caused by crop‐raiding monkeys. Management practices to prevent crop damage, such as guarding, excluding vertebrates or removal of adjacent natural vegetation, would also limit access for bats and birds and the great economic benefits provided by their biocontrol. Ecosystem services by bats and birds can be promoted by the exposure of artificial roost and nest sites, but research into species‐specific preferences is needed. The education of farmers is crucial, as many are unaware of the benefits from birds and bats and the fact that these benefits can outweigh the disadvantages of the monkeys' crop‐raiding.
Data from: An inordinate fondness for beetles? Variation in seasonal dietary preferences of night roosting big brown bats (Eptesicus fuscus)
Generalist species with numerous food web interactions are thought to provide stability to ecosystem dynamics; however, it is not always clear whether habitat generality translates into dietary diversity. Big brown bats are common across North America and employ a flexible foraging strategy over water, dense forests, forest edges and rural and urban settings. Despite this generalist use of habitat, they are paradoxically characterized as beetle specialists. However, hard carapaces may preferentially survive digestion leading to over-representation during morphological analysis of diet. This specialization has not been evaluated independently using molecular analysis and species-level identification of prey. We used next-generation sequencing to assess the diet of big brown bats. Beetles were consumed in the highest frequency but Lepidoptera species richness was highest among identified prey. The consumption of species showed strong seasonal and annual variation. While Coleoptera consumption varied, Lepidoptera and Ephemeroptera were relatively constant dietary components. Dietary diversity increased in late summer when insect diversity decreases. Our results indicate that big brown bats are dietary generalists and, while beetles are an important component of the diet, Lepidoptera are equally important, and Lepidoptera and Ephemeroptera are the only stable prey resource exploited. As resources become limited, big brown bats may respond by increasing the species richness of prey and thus their connectedness in the ecosystem. This characterization of diet corresponds well with a generalist approach to foraging, making them an important species in encouraging and maintaining ecosystem stability.
Data from: Cold-hearted bats: uncoupling of heart rate and metabolism during torpor at subzero temperatures
Many hibernating animals thermoregulate during torpor and defend their body temperature (Tb) below 10°C by an increase in metabolic rate. Above a critical temperature (Tcrit) animals usually thermoconform. We investigated the physiological responses above and below Tcrit for a small tree dwelling bat (Chalinolobus gouldii, ~14 g) that is often exposed to subzero temperatures during winter. Through simultaneous measurement of heart rate (HR) and oxygen consumption (V̇O2) we show that the relationship between oxygen transport and cardiac function is substantially altered in thermoregulating torpid bats between 1 and -2°C, compared with thermoconforming torpid bats at mild ambient temperatures (Ta 5-20°C). Tcrit for this species was Ta 0.7 ± 0.4°C, with a corresponding Tb of 1.8 ± 1.2°C. Below Tcrit animals began to thermoregulate, indicated by a considerable but disproportionate increase in both HR and V̇O2. The maximum increase in HR was only 4-fold greater than the average thermoconforming minimum, compared to a 46-fold increase in V̇O2. The differential response of HR and V̇O2 to low Ta was reflected in a 15-fold increase in oxygen delivery per heart beat (cardiac oxygen pulse). During torpor at low Ta, thermoregulating bats maintained a relatively slow HR and compensated for increased metabolic demands by significantly increasing stroke volume and tissue oxygen extraction. Our study provides new information on the relationship between metabolism and HR in an unstudied physiological state that may occur frequently in the wild and can be extremely costly for heterothermic animals.
Data from: Using sounds for making decisions: greater tube-nosed bats prefer antagonistic calls over non-communicative sounds when feeding
Bats vocalize extensively within different social contexts. The type and extent of information conveyed via their vocalizations and their perceptual significance, however, remains controversial and difficult to assess. Greater tube-nosed bats, Murina leucogaster, emit calls consisting of long rectangular broadband noise burst (rBNBl) syllables during aggression between males. To experimentally test the behavioral impact of these sounds for feeding, we deployed an approach and place-preference paradigm. Two food trays were placed on opposite sides and within different acoustic microenvironments, created by sound playback, within a specially constructed tent. Specifically, we tested whether the presence of rBNBl sounds at a food source effectively deters the approach of male bats in comparison to echolocation sounds and white noise. In each case, contrary to our expectation, males preferred to feed at a location where rBNBl sounds were present. We propose that the species-specific rBNBl provides contextual information, not present within non-communicative sounds, to facilitate approach towards a food source.
Data from: The indicator side of tree microhabitats: a multi-taxon approach based on bats, birds and saproxylic beetles
1. National and international forest biodiversity assessments largely rely on indirect indicators, based on elements of forest structure that are used as surrogates for species diversity. These proxies are reputedly easier and cheaper to assess than biodiversity. Tree microhabitats – tree-borne singularities such as cavities, conks of fungi or bark characteristics – have gained attention as potential forest biodiversity indicators. However, as with most biodiversity indicators, there is a lack of scientific evidence documenting their quantitative link with the biodiversity they are supposed to assess. 2. We explored the link between microhabitat indices and the richness and abundance of three taxonomic groups: bats, birds, and saproxylic beetles. Using a nation-wide multi-taxon sampling design in France, we compared 213 plots located inside and outside strict forest reserves. We hypothesized that the positive effect setting aside forest reserves has on biodiversity conservation is indirectly due to an increase in the proportion of large structural elements (e.g. living trees, standing and lying deadwood). These, in turn, are likely to favour the quantity and diversity of microhabitats. We analysed the relationship between the abundance and species richness of different groups and guilds (e.g. red-listed species, forest specialists, cavity dwellers) and microhabitat density and diversity. We then used confirmatory structural equation models to assess the direct and indirect effects of management abandonment, large structural elements and microhabitats on the biodiversity of the target species. 3. For several groups of birds and bats, the indirect effect of management abandonment and large structural elements on biodiversity was mediated by microhabitats. However, the magnitude of the link between microhabitat indices and biodiversity was moderate. In particular, saproxylic beetles' biodiversity was poorly explained by microhabitats, large structural elements or management abandonment. 4. Synthesis and applications: Tree microhabitats may serve as indicators for bats and birds, but they are not a universal biodiversity indicator. Rather, compared to large structural elements, they most likely have a complementary role to biodiversity. In terms of forest management and conservation, preserving diversity of microhabitats at the local scale benefits several groups of both bats and birds.
Data from: A 2.6‐g sound and movement tag for studying the acoustic scene and kinematics of echolocating bats
1. To study sensorimotor behaviour in wild animals, it is necessary to synchronously record the sensory inputs available to the animal, and its movements. To do this, we have developed a biologging device that can record the primary sensory information and the associated movements during foraging and navigating in echolocating bats. 2. This 2.6 -gram tag records the sonar calls and echoes from an ultrasonic microphone, while simultaneously sampling fine-scale movement in three dimensions from wideband accelerometers and magnetometers. In this study, we tested the tag on an European noctula (Nyctalus noctula) during target approaches and on four big brown bats (Eptesicus fuscus) during prey interception in a flight room. 3. We show that the tag records both the outgoing calls and echoes returning from objects at biologically relevant distances. Inertial sensor data enables the detection of behavioural events such as flying, turning, and resting. In addition, individual wing-beats can be tracked and synchronized to the bat's sound emissions to study the coordination of different motor events. 4. By recording the primary acoustic flow of bats concomitant with associated behaviours on a very fine time-scale, this type of biologging method will foster a deeper understanding of how sensory inputs guide feeding behaviours in the wild.
Data from: Environmental margin and island evolution in Middle Eastern populations of the Egyptian fruit bat
Here, we present a study of the population genetic architecture and microevolution of the Egyptian fruit bat (Rousettus aegyptiacus) at the environmental margins in the Middle East using mitochondrial sequences and nuclear microsatellites. In contrast to the rather homogenous population structure typical of cave-dwelling bats in climax tropical ecosystems, a relatively pronounced isolation by distance and population diversification was observed. The evolution of this pattern could be ascribed to the complicated demographic history at higher latitudes related to the range margin fragmentation and complex geomorphology of the studied area. Lineages from East Africa and Arabia show divergent positions. Within the northwestern unit, the most marked pattern of the microsatellite dataset is connected with insularity, as demonstrated by the separate status of populations from Saharan oases and Cyprus. These demes also exhibit a reduction in genetic variability, which is presumably connected with founder effects, drift and other potential factors related to island evolution as site-specific selection. Genetic clustering indicates a semipermeability of the desert barriers in the Sahara and Arabian Peninsula and a corridor role of the Nile Valley. The results emphasizes the role of the island environment in restricting the gene flow in megabats, which is also corroborated by biogeographic patterns within the family, and suggests the possibility of nascent island speciation on Cyprus. Demographic analyses suggest that the colonization of the region was connected to the spread of agricultural plants; therefore, the peripatric processes described above might be because of or strengthened by anthropogenic changes in the environment.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.