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FIGURE 6 in Synopsis of extinct Bruchomyiinae (Diptera, Psychodidae) from Burmese, Baltic and Dominican amber, with descriptions of new genera and species
FIGURE 6. Palaeoglaesum quandrispiculatum (Stebner, Solórzano-Kraemer, Ibáñez-Bernal & Wagner) a. head lateral view; b. palp segments; c. pedicel and 1st flagellomere; d. apical antennal flagellomeres; e. genitalia transverse lateral view. Abbreviations: ascl—aedeagus sclerite; c—cercus; ep—epandrium; gcx—gonocoxite; gst—gonostylus; pm—parameres.
Supplementary material 4 from: Slater G, Scheel D, Kolokotronis S, Potter C, Rotstein D, Tsangaras K, Greenwood A, Helgen K (2014) Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology. ZooKeys 409: 1-33. https://doi.org/10.3897/zookeys.409.6244
Fifty percent majority-rule consensus tree based on 1000 bootstrap pseudoreplicates generated using the maximum parsimony phylogenetic optimality criterion.: Explanation note: Values at nodes indicate the proportion of bootstrap trees (>50%) for which a particular bipartition was recovered.
Supplementary material 2 from: Slater G, Scheel D, Kolokotronis S, Potter C, Rotstein D, Tsangaras K, Greenwood A, Helgen K (2014) Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology. ZooKeys 409: 1-33. https://doi.org/10.3897/zookeys.409.6244
Alignment of Neomonachus tropicalis cytb with extant monk seal cytb sequences.: Explanation note: The extinct Caribbean monk seal sequence was used as a reference. Dots indicate identity to the reference. Differences are shown as the base change relative to the reference. Numbering starts from the first base of the ATG start codon.
Supplementary material 1 from: Slater G, Scheel D, Kolokotronis S, Potter C, Rotstein D, Tsangaras K, Greenwood A, Helgen K (2014) Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology. ZooKeys 409: 1-33. https://doi.org/10.3897/zookeys.409.6244
Amplicons covering cytb in this study.: Explanation note: Sequence of the cytb gene and the resulting PCR amplicons with length in number of base pairs (bp). Asterisks indicate that the sequence extends over the 3' or 5' border of the target sequence.
Supplementary material 3 from: Slater G, Scheel D, Kolokotronis S, Potter C, Rotstein D, Tsangaras K, Greenwood A, Helgen K (2014) Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology. ZooKeys 409: 1-33. https://doi.org/10.3897/zookeys.409.6244
Alignment of three Neomonachus tropicalis D-loop hypervariable region sequences (from USNM 100358, 102527, and 102534).: Explanation note: The Neomonachus schauinslandi sequence was used as a reference. Dots indicate identity to the reference. Differences are shown as the base change relative to the reference. Numbering starts at the first base after the primer closest to the 5' end. The X symbols indicate the break between the two amplicons that are approximately 200 bp apart. Sequences were generated from consensus sequences of 3–5 individual PCR product clones. Several products were cloned and sequenced from more than one amplicon to confirm that the differences observed were not DNA damage related or due to sequencing errors.
FIGURE 4 in A new species of extinct Late Quaternary giant tortoise from Hispaniola
FIGURE 4. Plastron and carapace fragments of Chelonoidis marcanoi sp. nov. from Pedernales Province, Dominican Republic: a, d, epiplastron fragment (MNHNSD FOS 23.1056), external and internal views; b, e, epiplastron fragment (MNHNSD FOS 23.1060), external and internal views; c, h, costal fragment (NHMUK PV R 36955), internal and external views; f–g, peripheral fragment (MNHNSD FOS 23.1061), external and internal views; i–j, fragment from border of carapacial rim, including two peripherals and part of costal plate (MNHNSD FOS 23.1062), external and internal views. Scale bar=2 cm.
FIGURE 1 in A new species of extinct Late Quaternary giant tortoise from Hispaniola
FIGURE 1. Map of Hispaniola, showing geotectonic boundaries and locations of cave sites from which giant tortoise fossils have been reported. Capital cities indicated with filled stars. Key: 1, Cueva del Papayo; 2, Cueva No. 12; 3, Cueva de las Tortugas; 4, Cueva del Muerto; 5, Cueva de las Caritas; 6, Bayaguana.
FIGURE 3 in A new species of extinct Late Quaternary giant tortoise from Hispaniola
FIGURE 3. Femora of Chelonoidis marcanoi sp. nov. from Pedernales Province, Dominican Republic: a–c, MNHNSD FOS 23.1063, left femur (young individual), lateral, anterior and medial views; d–e, MNHNSD FOS 23.1055, right distal femur, anterior and lateral views. Scale bar=2 cm.
FIGURE 2 in A new species of extinct Late Quaternary giant tortoise from Hispaniola
FIGURE 2. Humeri of Chelonoidis marcanoi sp. nov. from Pedernales Province, Dominican Republic: a–b, NHMUK PV R 36954 (holotype), right humerus, anterior and medial views; c–d, MNHNSD FOS 23.1064, left proximal humerus, medial and lateral views; e–f, MNHNSD FOS 23.1058, right humerus, anterior and lateral views; g–h, MNHNSD FOS 23.1054, left humerus, anterior and medial views; i, MNHNSD FOS 23.1059, right distal humerus, anterior view; j–k, MNHNSD FOS 23.1057, left humerus (young individual), anterior and medial views. Scale bar=2 cm.
FIGURE 6 in A new species of extinct Late Quaternary giant tortoise from Hispaniola
FIGURE 6. Schematic drawing of dermal bones of chelonian carapace (left) and plastron (right), indicating approximate estimated position of described shell fragments of Chelonois marcanoi sp. nov. from Pedernales Province, Dominican Republic. Original position on either the left or right side of the carapace is uncertain for the two specimens indicated with asterisks.
Dataset for: Trait-mediated speciation and human-driven extinctions in proboscideans revealed by unsupervised Bayesian neural networks
<p>This repository contains the output of all birth-death neural network simulations and the empirical analyses of Proboscidean diversification. For details see the Readme of the individual directories.</p>
FIGURE 2 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 2. Holotype of Anomaloglossus blanci sp. nov MNHN2017.0103 (AF0953): (A) in life dorsolateral view; (B) in life ventral view; (C) in preservative dorsal view; (D) in preservative ventral view; (E) in preservative head lateral view; (F) right hand; (G) right foot; (H) median lingual process.
FIGURE 1 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 1. (A) Map of occurrences of the four species of the A. degranvillei species group. The range of A. surinamensis is depicted by a grey convex polygon. (B) Best ML tree obtained from RAxML NG using>15kb of mtDNA for six terminals (accession numbers in red) and 418 bp of 16S for 32 terminals (accession numbers in black). The tree is rooted on Anomaloglossus baeobatrachus. Bootstrap values are given in % for each node (*=99 or 100%).
FIGURE 7 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 7. Holotype of Anomaloglossus dewynteri sp. nov MNHN2017.0111 (AF3644): (A) in life dorsolateral view; (B) in life ventral view; (C) in preservative dorsal view; (D) in preservative ventral view; (E) in preservative head lateral view; (F) Right hand; (G) right foot; (H) median lingual process.
FIGURE 4. Male specimen MNHN2017.0130 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 4. Male specimen MNHN2017.0130 (AF2324) of Anomaloglossus surinamensis from Chutes Voltaire, French Guiana: (A) in life dorsolateral view; (B) in life ventral view; (C) in preservative dorsal view; (D) in preservative ventral view; (E) in preservative head lateral view; (F) Right hand; (G) right foot; (H) median lingual process.
FIGURE 6 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 6. Living specimens and habitats of the four species of the Anomaloglossus degranvillei clade; (A) A. blanci including two males carrying tadpoles MNHN2017.0110 (AF0952) was carrying two metamorphs but one was removed, a mark left by the missing tadpole is visible on the skin; an unvouchered male with three tadpoles at different stages probably from two different clutches); (B) A. dewynteri including one uncollected male carrying six tadpoles; (C) A. degranvillei uncollected male carrying four tadpoles; (D) A. surinamensis male from the type locality in Suriname carrying three tadpoles.
FIGURE 5 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 5. Specimens of Anomaloglossus degranvillei from Atachi Bakka, French Guiana: (A) unvouchered female specimen in life dorsolateral view; (B) unvouchered female specimen in life ventral view; (C) MNHN2017.0120 (PG618) male specimen in preservative dorsal view; (D) in preservative ventral view; (E) in preservative head lateral view; (F) Right hand; (G) right foot; (H) median lingual process.
FIGURE 3 in On the brink of extinction: two new species of Anomaloglossus from French Guiana and amended definitions of Anomaloglossus degranvillei and A. surinamensis (Anura: Aromobatidae)
FIGURE 3. Spectrograms and oscillograms of typical call of the four species of the Anomaloglossus degranvillei clade with two time windows; 2 s and 0.3 s. For A. blanci and A. degranvillei the background noises masked the fundamental frequency.
FIGURE 2 in A new scale insect of the extinct family Weitschatidae (Insecta: Hemiptera: Coccomorpha) from mid-Cretaceous Burmese amber
FIGURE 2. Detailed photographs of Criniverticillus longicumulus Lin, Yao & Ren gen. et sp. nov. holotype, CNU-COC- MA2018001. (A) dorsal and (B) ventral views of body; (C) left tubercular projection on apex of abdomen in (B); (D) ventral view of right mid- and hind legs; (E) claw, tarsus and part of tibia (note bifurcate setae and spine-like claw digitules) in (D); (F) ventral view of antennae; (G) apical antennal segment in (F); (H) lateral view of apex of antenna (note basiconic sensilla); (I) dorsal view of forewing; (J) dorsal view of hamulohalteres. Scale bars for A, B, D, F, I = 0.4 mm; C = 0.05 mm; E, G, H, J = 0.1 mm.
FIGURE 1 in A new scale insect of the extinct family Weitschatidae (Insecta: Hemiptera: Coccomorpha) from mid-Cretaceous Burmese amber
FIGURE 1. Holotype of Criniverticillus longicumulus Lin, Yao & Ren gen. et sp. nov. CNU-COC-MA2018001. Photomicrographs of (A) dorsal and (B) ventral views; line drawings of (C) dorsal and (D) ventral views. Scale bars = 1.0 mm. afp: anterior flexing patch; dse: dorsal simple eye; en: endophallus; mrt: median ridge on tergite; pfp: posterior flexing patch; sscr: sensorium on subcostal ridge; tp: tubercular projection.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.