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zenodo28/100

Figure 8 from: Gómez S, Yáñez-Rivera B (2022) The genus Cletocamptus (Harpacticoida, Canthocamptidae): a reappraisal, with proposal of a new subfamily, a new genus, and a new species. ZooKeys 1080: 165-208. https://doi.org/10.3897/zookeys.1080.71192

Figure 8 Phylogenetic hypothesis showing the relative position of Cletocamptinae subfam. nov. and Cletocamptoides gen. nov. Bootstrap (boot) and BI posterior probabilities (pp) represented as boot/pp. * Nodes of high support, boot > 90%; pp > 0.95.

opencc-by-4.0Jan 2022View details →
zenodo28/100

Figure 7 from: Gómez S, Yáñez-Rivera B (2022) The genus Cletocamptus (Harpacticoida, Canthocamptidae): a reappraisal, with proposal of a new subfamily, a new genus, and a new species. ZooKeys 1080: 165-208. https://doi.org/10.3897/zookeys.1080.71192

Figure 7 Schematic representation of the evolution of the mandibular palp in Cletocamptinae subfam. nov.

opencc-by-4.0Jan 2022View details →
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Figure 1 from: Gómez S, Yáñez-Rivera B (2022) The genus Cletocamptus (Harpacticoida, Canthocamptidae): a reappraisal, with proposal of a new subfamily, a new genus, and a new species. ZooKeys 1080: 165-208. https://doi.org/10.3897/zookeys.1080.71192

Figure 1 Cletocamptoides biushelo sp. nov., female holotype A habitus, dorsal B caudal seta V C left caudal ramus, dorsal D habitus, lateral E left caudal ramus, lateral.

opencc-by-4.0Jan 2022View details →
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Figure 4 from: Gómez S, Yáñez-Rivera B (2022) The genus Cletocamptus (Harpacticoida, Canthocamptidae): a reappraisal, with proposal of a new subfamily, a new genus, and a new species. ZooKeys 1080: 165-208. https://doi.org/10.3897/zookeys.1080.71192

Figure 4 Cletocamptoides biushelo sp. nov., female holotype A mandible B maxillule C maxilla D maxilliped.

opencc-by-4.0Jan 2022View details →
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Figure 2 from: Gómez S, Yáñez-Rivera B (2022) The genus Cletocamptus (Harpacticoida, Canthocamptidae): a reappraisal, with proposal of a new subfamily, a new genus, and a new species. ZooKeys 1080: 165-208. https://doi.org/10.3897/zookeys.1080.71192

Figure 2 Cletocamptoides biushelo sp. nov., female holotype A urosome, ventral (P5-bearing somite omitted) BP5, anterior.

opencc-by-4.0Jan 2022View details →
zenodo28/100

Proposal for a clinical and an echocardiographic score for prediction of left atrial thrombosis in atrial fibrillation patients undergoing early electrical cardioversion

<p>Aims: Left&nbsp;&nbsp; &nbsp;atrial&nbsp;&nbsp; &nbsp;thrombosis&nbsp;&nbsp; &nbsp;(LAT)&nbsp;&nbsp; &nbsp;is&nbsp;&nbsp; &nbsp;usually&nbsp;&nbsp; &nbsp;detected&nbsp;&nbsp; &nbsp;by&nbsp;&nbsp; &nbsp;transesophageal&nbsp;&nbsp; &nbsp;echocardi-<br> ography&nbsp;&nbsp; &nbsp;(TEE).&nbsp;&nbsp; &nbsp;The&nbsp;&nbsp; &nbsp;aim&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;present&nbsp;&nbsp; &nbsp;study&nbsp;&nbsp; &nbsp;was&nbsp;&nbsp; &nbsp;to&nbsp;&nbsp; &nbsp;identify&nbsp;&nbsp; &nbsp;clinical&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;echocardio-<br> graphic&nbsp;&nbsp; &nbsp;factors&nbsp;&nbsp; &nbsp;associated&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;left&nbsp;&nbsp; &nbsp;atrial&nbsp;&nbsp; &nbsp;thrombosis&nbsp;&nbsp; &nbsp;in&nbsp;&nbsp; &nbsp;atrial&nbsp;&nbsp; &nbsp;fibrillation&nbsp;&nbsp; &nbsp;(AF)&nbsp;&nbsp; &nbsp;patients&nbsp;&nbsp; &nbsp;<br> undergoing&nbsp;&nbsp; &nbsp;early&nbsp;&nbsp; &nbsp;electrical&nbsp;&nbsp; &nbsp;cardioversion&nbsp;&nbsp; &nbsp;(ECV)&nbsp;&nbsp; &nbsp;in&nbsp;&nbsp; &nbsp;order&nbsp;&nbsp; &nbsp;to&nbsp;&nbsp; &nbsp;create&nbsp;&nbsp; &nbsp;scores&nbsp;&nbsp; &nbsp;that&nbsp;&nbsp; &nbsp;can&nbsp;&nbsp; &nbsp;<br> predict&nbsp;&nbsp; &nbsp;LAT,&nbsp;&nbsp; &nbsp;in&nbsp;&nbsp; &nbsp;a&nbsp;&nbsp; &nbsp;non-invasive&nbsp;&nbsp; &nbsp;way.<br> Methods: A&nbsp;&nbsp; &nbsp;consecutive&nbsp;&nbsp; &nbsp;cohort&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;patients&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;persistent&nbsp;&nbsp; &nbsp;AF&nbsp;&nbsp; &nbsp;scheduled&nbsp;&nbsp; &nbsp;for&nbsp;&nbsp; &nbsp;ECV&nbsp;&nbsp; &nbsp;<br> was&nbsp;&nbsp; &nbsp;evaluated&nbsp;&nbsp; &nbsp;by&nbsp;&nbsp; &nbsp;transthoracic&nbsp;&nbsp; &nbsp;echocardiography&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;TEE.&nbsp;&nbsp; &nbsp;By&nbsp;&nbsp; &nbsp;a&nbsp;&nbsp; &nbsp;logistic&nbsp;&nbsp; &nbsp;regression&nbsp;&nbsp; &nbsp;<br> model,&nbsp;&nbsp; &nbsp;variables&nbsp;&nbsp; &nbsp;significantly&nbsp;&nbsp; &nbsp;associated&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;LAT&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;assessed&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;introduced&nbsp;&nbsp; &nbsp;in&nbsp;&nbsp; &nbsp;<br> predictive models to develop both a clinical and an echocardiographic prediction&nbsp;<br> score&nbsp;&nbsp; &nbsp;for&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;presence&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;LAT.<br> Results: In&nbsp;&nbsp; &nbsp;total,&nbsp;&nbsp; &nbsp;125&nbsp;&nbsp; &nbsp;patients&nbsp;&nbsp; &nbsp;[median&nbsp;&nbsp; &nbsp;71&nbsp;&nbsp; &nbsp;(range&nbsp;&nbsp; &nbsp;49-88)&nbsp;&nbsp; &nbsp;years,&nbsp;&nbsp; &nbsp;60.0%&nbsp;&nbsp; &nbsp;males]&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;<br> enrolled.&nbsp;&nbsp; &nbsp;Transesophageal&nbsp;&nbsp; &nbsp;echocardiography&nbsp;&nbsp; &nbsp;showed&nbsp;&nbsp; &nbsp;LAT&nbsp;&nbsp; &nbsp;in&nbsp;&nbsp; &nbsp;35&nbsp;&nbsp; &nbsp;patients&nbsp;&nbsp; &nbsp;(28%).&nbsp;&nbsp; &nbsp;The&nbsp;&nbsp; &nbsp;<br> clinical&nbsp;&nbsp; &nbsp;variables&nbsp;&nbsp; &nbsp;significantly&nbsp;&nbsp; &nbsp;associated&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;LAT&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;previous&nbsp;&nbsp; &nbsp;stroke&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;4.17),&nbsp;&nbsp; &nbsp;<br> higher&nbsp;&nbsp; &nbsp;CHA2DS2-VASc&nbsp;&nbsp; &nbsp;score&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;1.93),&nbsp;&nbsp; &nbsp;lower&nbsp;&nbsp; &nbsp;estimated&nbsp;&nbsp; &nbsp;glomerular&nbsp;&nbsp; &nbsp;filtration&nbsp;&nbsp; &nbsp;rate&nbsp;&nbsp; &nbsp;<br> (OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;0.80),&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;higher&nbsp;&nbsp; &nbsp;brain&nbsp;&nbsp; &nbsp;natriuretic&nbsp;&nbsp; &nbsp;peptide&nbsp;&nbsp; &nbsp;levels&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;1.44).&nbsp;&nbsp; &nbsp;Among&nbsp;&nbsp; &nbsp;echocar-<br> diographic&nbsp;&nbsp; &nbsp;parameters,&nbsp;&nbsp; &nbsp;E/e&prime;&nbsp;&nbsp; &nbsp;ratio&nbsp;&nbsp; &nbsp;was&nbsp;&nbsp; &nbsp;directly&nbsp;&nbsp; &nbsp;associated&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;LAT&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;2.25),&nbsp;&nbsp; &nbsp;while&nbsp;&nbsp; &nbsp;<br> an&nbsp;&nbsp; &nbsp;inverse&nbsp;&nbsp; &nbsp;correlation&nbsp;&nbsp; &nbsp;was&nbsp;&nbsp; &nbsp;detected&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;left&nbsp;&nbsp; &nbsp;ventricular&nbsp;&nbsp; &nbsp;ejection&nbsp;&nbsp; &nbsp;fraction&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;0.43)&nbsp;&nbsp; &nbsp;<br> and&nbsp;&nbsp; &nbsp;total&nbsp;&nbsp; &nbsp;global&nbsp;&nbsp; &nbsp;left&nbsp;&nbsp; &nbsp;atrial&nbsp;&nbsp; &nbsp;strain&nbsp;&nbsp; &nbsp;(OR&nbsp;&nbsp; &nbsp;=&nbsp;&nbsp; &nbsp;0.59).&nbsp;&nbsp; &nbsp;Two&nbsp;&nbsp; &nbsp;prediction&nbsp;&nbsp; &nbsp;scores&nbsp;&nbsp; &nbsp;(clinical&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;echo-<br> cardiographic)&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;developed.&nbsp;&nbsp; &nbsp;The&nbsp;&nbsp; &nbsp;positive&nbsp;&nbsp; &nbsp;predictive&nbsp;&nbsp; &nbsp;values&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;clinical&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;<br> echocardiographic&nbsp;&nbsp; &nbsp;score&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;80%&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;100%,&nbsp;&nbsp; &nbsp;respectively,&nbsp;&nbsp; &nbsp;while&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;negative&nbsp;&nbsp; &nbsp;pre-<br> dictive&nbsp;&nbsp; &nbsp;values&nbsp;&nbsp; &nbsp;were&nbsp;&nbsp; &nbsp;98%&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;94%,&nbsp;&nbsp; &nbsp;respectively.&nbsp;&nbsp; &nbsp;Combined&nbsp;&nbsp; &nbsp;use&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;the&nbsp;&nbsp; &nbsp;scores&nbsp;&nbsp; &nbsp;reached&nbsp;&nbsp; &nbsp;<br> a&nbsp;&nbsp; &nbsp;positive&nbsp;&nbsp; &nbsp;and&nbsp;&nbsp; &nbsp;negative&nbsp;&nbsp; &nbsp;predictive&nbsp;&nbsp; &nbsp;value&nbsp;&nbsp; &nbsp;of&nbsp;&nbsp; &nbsp;100%.<br> Conclusions: When providing concordant information the two scores are able to cor-<br> rectly&nbsp;&nbsp; &nbsp;identify&nbsp;&nbsp; &nbsp;patients&nbsp;&nbsp; &nbsp;with&nbsp;&nbsp; &nbsp;or&nbsp;&nbsp; &nbsp;without&nbsp;&nbsp; &nbsp;LAT.&nbsp;&nbsp; &nbsp;An&nbsp;&nbsp; &nbsp;external&nbsp;&nbsp; &nbsp;validation&nbsp;&nbsp; &nbsp;is&nbsp;&nbsp; &nbsp;necessary&nbsp;&nbsp; &nbsp;to&nbsp;&nbsp; &nbsp;<br> demonstrate their usefulness in the clinical practice.</p>

opencc-by-4.0Aug 2021View details →
zenodo28/100

Supplementary material 3 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure S3. Result of the ASAP species delimitation analysis

opencc-zeroFeb 2022View details →
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Supplementary material 6 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure S6. Results of PTP species delimitation analyses

opencc-zeroFeb 2022View details →
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Figure 7 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 7 Erioscyphella insulaeTNS-F-39720 (Holotype) A dried apothecia B a pure culture on PDA (NBRC 114459) C asci D ascal pore MLZ (+) E ascospores F ascogenous hyphae G paraphyses H layer structures of excipulum H1 medullary excipulum H2 inner layer of ectal excipulum composed of hyphae H3 outer layer of ectal excipulum composed of textura angularisI, J hairs with apical amorphous materials. Mounted in CB/LA (C, E–J), MLZ (D). Scale bars: 1 mm (A); 10 µm (A–J).

opencc-by-4.0Feb 2022View details →
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Figure 6 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 6 Erioscyphella boninensisTNS-F-26520 (Holotype) A ascospores B apothecium C vertical section of an apothecium D expansion of a vertical section of an apothecium E ectal excipular cells F asci G paraphyses H hairs.

opencc-by-4.0Feb 2022View details →
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Figure 14 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 14 Erioscyphella paralushanensisTNS-F-61920 (Holotype) A apothecia B vertical section of an apothecium C expansion of an vertical section of an apothecium D asci E hairs F ectal excipulum G paraphyses H ascospores.

opencc-by-4.0Feb 2022View details →
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Figure 13 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 13 Erioscyphella paralushanensisTNS-F-61920 (Holotype) A apothecia B pure culture on PDA (NBRC 114468) C ascus D ascal pore iodine reactions D1MLZ (faintly +) without 3% KOH pretreatment D2MLZ (+) with 3% KOH pretreatment D3 IKI (+) without 3% KOH pretreatment E paraphysis F ascospores G ectal excipular cells H marginal section of an apothecium generating hairs I hairs with red resinous materials J apical amorphous materials of hairs. Mounted in CB/LA (C, E–J), MLZ (D1, D2), IKI (D3). Scale bars: 0.5 mm (A); 10 µm (C–J).

opencc-by-4.0Feb 2022View details →
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Supplementary material 4 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure S4. Result of the GMYC species delimitation analysis

opencc-zeroFeb 2022View details →
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Figure 10 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 10 Erioscyphella otaniiTNS-F-81472 (Holotype) A ascospores B apothecium C vertical section of an apothecium D hairs with cap-like structures arising from ectal excipular cells E expansion of a vertical section of an apothecium F paraphyses G asci.

opencc-by-4.0Feb 2022View details →
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Figure 5 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 5 Erioscyphella boninensisTNS-F-26520 (Holotype) A dried apothecia B pure culture on PDA (NBRC 114447) C ascus D ascal pore MLZ (+) E ascospores F paraphyses G ectal excipular cells H ectal excipular cells with red granules I hairs with resinous matters arising from ectal excipular cells. Mounted in CB/LA (C, E–I), MLZ (D). Scale bars: 1 mm (A); 10 µm (C–I).

opencc-by-4.0Feb 2022View details →
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Supplementary material 2 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure S2. Hair apices

opencc-zeroFeb 2022View details →
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Figure 12 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 12 Erioscyphella papillarisTNS-F-81272 (Holotype) A apothecium B vertical section of an apothecium C ascospores D expansion of an vertical section of an apothecium E ectal excipular cells F asci G paraphyses H hairs with cap-like structures.

opencc-by-4.0Feb 2022View details →
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Figure 1 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 1 ML best-scored phylogenetic tree based on the concatenated dataset of ITS, LSU, mtSSU, and RPB2 constructed using RAxML-NG. MLBP/MPBP/BPP are represented on branches in this order. In MLBP/MPBP &lt; 50% or BPP &lt; 0.95, a hyphen appears. No evaluation values are shown on branches when MLBP and MPBP &lt; 50% and BPP &lt; 0.95. The branch of a clade TNS-F-17245 + 17249 to its most recent common ancestor is only one-third of the intended length due to space limitation.

opencc-by-4.0Feb 2022View details →
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Figure 11 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 11 Erioscyphella papillarisTNS-F-81272 (Holotype) A dried apothecia B pure culture on PDA (NBRC 113937) C Ascus arising from ascogenous hyphae D an ascus E ascal pore iodine reactions E1MLZ (-) without 3% KOH pretreatment E2MLZ (-) with 3% KOH pretreatment E3 IKI (+) without 3% KOH pretreatment F paraphysis G ascospores with guttules H ectal excipulum I hair-apex with a apical amorphous material J hairs. Mounted in CB/LA (C, D, F–J), MLZ (E1, E2), IKI (E3). Scale bars: 0.5 mm (A); 10 µm (C–J).

opencc-by-4.0Feb 2022View details →
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Figure 16 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082

Figure 16 Erioscyphella sasibrevisporaTNS-F-81401 (Holotype A–D, F, G). Lachnum novoguineense var. yunnanicumTNS-F-16642 (E) A apothecium B vertical section of an apothecium C ascospores D asci (with basal structures sometimes with perforation) E ascal base arising from a crozier with perforation F paraphyses G ectal excipular cells H hairs.

opencc-by-4.0Feb 2022View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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