Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Single cell analysis in the adult bone marrow
GEO Series GSE128464. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Combinatorial profiling of multiple histone modifications and transcriptome in single cells using scMTR-seq [bulk_DNA]
GEO Series GSE277776. Homo sapiens. 28 samples. Type: Other.
Spatiotemporal and genetic cell lineage tracing of endodermal organogenesis at single-cell resolution [Smart-seq3-RNA-seq-add]
GEO Series GSE277789. Mus musculus. 830 samples. Type: Expression profiling by high throughput sequencing.
Viral transcriptomic analysis of single cell-sorted of DF1 or MDCK cell lines infected with influenza A virus
GEO Series GSE135553. Canis lupus familiaris; Gallus gallus. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptional profiling of splenic fibroblasts reveals subset-specific innate immune signatures in homeostasis and during viral infection
GEO Series GSE156162. Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal single-cell analysis decodes cellular dynamics underlying different responses to immunotherapy in Colorectal Cancer
GEO Series GSE236581. Homo sapiens. 169 samples. Type: Other.
Single cell RNA seq of intestinal immune cells and PBMCs in salt-sensitive hypertension
GEO Series GSE293074. Rattus norvegicus. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics analysis identifies metabolism-linked epigenetic reprogramming as a driver of therapy-resistant medulloblastoma [Multiome]
GEO Series GSE283619. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
single-cell RNA-seq of murine spleen by TAS-Seq
GEO Series GSE180140. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq identifies cell diversity in embryonic salivary glands [Bulk RNA-seq]
GEO Series GSE127260. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Barcoded viral tracing of single-cell interactions in CNS inflammation
GEO Series GSE150858. Suid alphaherpesvirus 1; Mus musculus; unidentified plasmid. 128 samples. Type: Other; Expression profiling by high throughput sequencing.
Gene expression profiling of immune cells at the single-cell level from livers of URI and glutamine synthetase knockout mice
GEO Series GSE266568. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Profiling mouse cochlear cell maturation using 10X Genomics single-cell transcriptomics
GEO Series GSE202920. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Mega-scale single-cell profiling reveals novel biomarkers associated with acute GvHD after allogeneic hematopoietic stem cell transplantation
GEO Series GSE295359. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
A lineage-resolved molecular atlas of C. elegans embryogenesis at single cell resolution
GEO Series GSE126954. Caenorhabditis elegans. 8 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-Seq of Ewing Sarcoma PDX data (PDX_Chromium)
GEO Series GSE130024. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of the developing C57/BL6 mouse back skin at E13.5, E16.5 and P0
GEO Series GSE131498. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq reveals developmental plasticity with coexisting oncogenic states and immune evasion programs in ETP-ALL [Patients_TALLs_scRNA-seq]
GEO Series GSE161895. Homo sapiens. 5403 samples. Type: Expression profiling by high throughput sequencing.
Single-cell mRNA analysis of colon phagocyte heterogeneity identifies two major macrophage developmental pathways
GEO Series GSE137927. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNAseq of the murine intestinal epithelium infected with rotavirus
GEO Series GSE169197. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.