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Population genetics reveal that the western Tianshan Mountains populations of Agrilus mali (Coleoptera: Buprestidae) may not be introduced recently
<p>Supplementary charts and haplotype sequences for all genes in the article are included in this zip file.</p>
Supporting information for Plant migration under long-lasting hyperaridity – phylogenomics unravels recent biogeographic history in one of the oldest deserts on Earth
<p>R Scripts, input and parameter files as well as analysis results are provided for the publication: Böhnert et la. (2022) Plant migration under long-lasting hyperaridity – phylogenomics unravels recent biogeographic history in one of the oldest deserts on Earth. New Phyotologist.</p>
Distribution. Widespread in the C and W regions of S Africa, reaching to about 15° N in SW Angola. Occupies mainly arid and semi-arid areas, but also occurs in regions with higher precipitation and denser vegetation, such as the fynbos biome of South Africa's Western Cape Province. Cape Foxes have expanded their range over recent decades to the SW, where the species reaches the Atlantic and Indian Ocean coastlines. May occur in SW Swaziland, and possibly also in Lesotho. in Canidae
Distribution. Widespread in the C and W regions of S Africa, reaching to about 15° N in SW Angola. Occupies mainly arid and semi-arid areas, but also occurs in regions with higher precipitation and denser vegetation, such as the fynbos biome of South Africa's Western Cape Province. Cape Foxes have expanded their range over recent decades to the SW, where the species reaches the Atlantic and Indian Ocean coastlines. May occur in SW Swaziland, and possibly also in Lesotho.
Distribution. Endemic to Chile, with a disjunct distribution in the forests of Chiloé Island, and on the mainland coastal mountains in Nahuelbuta National Park. Evidence of a new population was foud recently at Punta Chan Chan, N of Valdivia. in Canidae
Distribution. Endemic to Chile, with a disjunct distribution in the forests of Chiloé Island, and on the mainland coastal mountains in Nahuelbuta National Park. Evidence of a new population was foud recently at Punta Chan Chan, N of Valdivia.
FIGURE 7. Mahechadendron puntecascarillo. A. Tree recently cut down. B. Tree stump showing the dark heartwood. C in Mahechadendron puntecascarillo (Vochysiaceae), a new genus and forest tree species from Colombia
FIGURE 7. Mahechadendron puntecascarillo. A. Tree recently cut down. B. Tree stump showing the dark heartwood. C. Sawn timber in the field. Photos by W. Ariza-Cortés.
Distribution. Endemic to South America, with records in Colombia, Ecuador, Peru, N & CW Brazil, and NE Argentina (Parana River basin). Occurrence localities in Bolivia and Paraguay were attributed to recently described M. midastactus. in Vespertilionidae
Distribution. Endemic to South America, with records in Colombia, Ecuador, Peru, N & CW Brazil, and NE Argentina (Parana River basin). Occurrence localities in Bolivia and Paraguay were attributed to recently described M. midastactus.
Distribution. Peninsular Malaysia and N Borneo (Sabah); recently recorded from S Thailand (Kaeng Krachan National Park in Phetchaburi Province) and from W Borneo (Bukit Sarang and Mt Penrisen in Sarawak). in Vespertilionidae
Distribution. Peninsular Malaysia and N Borneo (Sabah); recently recorded from S Thailand (Kaeng Krachan National Park in Phetchaburi Province) and from W Borneo (Bukit Sarang and Mt Penrisen in Sarawak).
Distribution. Mostly in E New Guinea with one record in West Papua Province and one record each from Salawati and New Ireland Is; possibly on New Britain and SudestIs; there was a recent acoustic record from Manus I that probably is a member of this species complex, but this needs confirmation with a specimen, and the species is most likely widespread in W New Guinea. in Vespertilionidae
Distribution. Mostly in E New Guinea with one record in West Papua Province and one record each from Salawati and New Ireland Is; possibly on New Britain and SudestIs; there was a recent acoustic record from Manus I that probably is a member of this species complex, but this needs confirmation with a specimen, and the species is most likely widespread in W New Guinea.
Subspecies and Distribution. N.p.plancyiGerbe,1880—NE&ECChina(Gansu,Shaanxi,Shanxi,Henan,Beijing,Shandong,Liaoning,andJilin). N.p.labiatusHodgson,1835—HimalayasfromNPakistan,NIndia,Nepal,SCChina,andNMyanmaralongwithNW&SVietnam;mayoccurinThailand,NLaos,NEVietnam,andPeninsularMalaysia,buttherearenoconfirmedrecordsfromtheseregions. N. p. velutinus G. M. Allen, 1923 — C & SE China (Sichuan, Yunnan, Hubei, Anhui, Jiangsu, Shanghai, Zhejiang, Guizhou, Guangxi, Hunan, Jiangxi, Fujian, Guangdong, and Hong Kong) and Taiwan I. The subspecific status of recently collected specimens from the Central Cordillera of Luzon I in the Philippines is uncertain, although they may represent velutinus. Another specimen recently collected from Hainan I may also represent velutinus. in Vespertilionidae
Subspecies and Distribution. N.p.plancyiGerbe,1880—NE&ECChina(Gansu,Shaanxi,Shanxi,Henan,Beijing,Shandong,Liaoning,andJilin). N.p.labiatusHodgson,1835—HimalayasfromNPakistan,NIndia,Nepal,SCChina,andNMyanmaralongwithNW&SVietnam;mayoccurinThailand,NLaos,NEVietnam,andPeninsularMalaysia,buttherearenoconfirmedrecordsfromtheseregions. N. p. velutinus G. M. Allen, 1923 — C & SE China (Sichuan, Yunnan, Hubei, Anhui, Jiangsu, Shanghai, Zhejiang, Guizhou, Guangxi, Hunan, Jiangxi, Fujian, Guangdong, and Hong Kong) and Taiwan I. The subspecific status of recently collected specimens from the Central Cordillera of Luzon I in the Philippines is uncertain, although they may represent velutinus. Another specimen recently collected from Hainan I may also represent velutinus.
Distribution. Confirmed from NW Africa, the Sahel, and Nile Valley, E through the Middle East and WArabia to NW& C India (E to E Madhya Pradesh, 80° E); with possible distribution spots in E & SE India (indicated byfour mostlyhistorical records). Reportedly common in Bangladesh (yet disproved by recent reports) and retained on species lists of Myanmar, Thailand, and Sumatra without being supported by anyrecent record. in Rhinopomatidae
Distribution. Confirmed from NW Africa, the Sahel, and Nile Valley, E through the Middle East and WArabia to NW& C India (E to E Madhya Pradesh, 80° E); with possible distribution spots in E & SE India (indicated byfour mostlyhistorical records). Reportedly common in Bangladesh (yet disproved by recent reports) and retained on species lists of Myanmar, Thailand, and Sumatra without being supported by anyrecent record.
Distribution. Known from two localities in SW Ecuador (El Oro Province); more recently, it has been recorded in the Pacific coast of Colombia (Choco and Valle del Cauca departments), and NW Peru (Tumbes Department). Known distribution is changing as existing specimens from NW South America (listed as S. Lilium parvidens) are reidentified as this species; new geographic and ecological information is being gathered in the process, and it could be locally common at some specific habitats. in Phyllostomidae
Distribution. Known from two localities in SW Ecuador (El Oro Province); more recently, it has been recorded in the Pacific coast of Colombia (Choco and Valle del Cauca departments), and NW Peru (Tumbes Department). Known distribution is changing as existing specimens from NW South America (listed as S. Lilium parvidens) are reidentified as this species; new geographic and ecological information is being gathered in the process, and it could be locally common at some specific habitats.
FIGURE 19 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 19. Orthophytum caraibense (Vidal s.n.). A–B. General view of the habitat in the type locality, in Bonito de Minas, RPPN Vereda da Caraíba, Minas Gerais state. C. Habit. D. Habit of the holotype that flowered in cultivation. E. Details of the corolla. F. Floral bracts and flower. G. Proximal portion of the unappendaged petal. H. Conduplicate-patent stigma type. Bars = 5 mm. (A–C photos: C.V. Vidal).
FIGURE 16 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 16. Adaxial view of the anthers in pre-anthesis (A, E, G, K, M, Q, S, W) and at anthesis (B, H, N, T), and abaxial view in pre-anthesis (C, F, I, L, O, R, U, X) and at anthesis (D, J, P, V). A–D. Siqueiranthus cinereus (Leme 9785). E–F. Cryptanthus zonatus (Leme 6234). G–J. C. lacerdae (Leme 9828). K–L. C. robsonianus (Leme 8896). M–P. Orthophytum maracasense (Leme 9615). Q–R. O. leprosum (Leme 9539). S–V. Krenakanthus roseolilacinus (Leme 8922). W–X. Orthocryptanthus vasconcelosianus (Leme 8673). Bars = 2 mm.
FIGURE 12 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 12. Siqueiranthus cinereus at type locality: A. Habit. B–C. Details of the inflorescence. D. José Alves Siqueira Filho during his field studies with the type population. E–F. Different stages and sizes of the caulescent habit. G. Details of the inflorescence. Bars = 20 cm. (Photos: J.A. Siqueira).
FIGURE 9 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 9. Species of Orthocryptanthus: A. O. vasconcelosianus (Leme 8673). B. O. santaritensis (Leme 8945). C. O. arcanus (Leme 9093).
FIGURE 18 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 18. Longitudinal cross-section of the ovary (A–D) and fruits (E–J) of Siqueiranthus and Cryptanthus. A. S. cinereus (Leme 9785). B. C. lacerdae (Leme 9828). C. C. robsonianus (Leme 8896). D. C. pseudopetiolatus (Leme 9812). E–F. S. cinereus (Leme 9785). G. C. colnagoi (Leme 9154). H. C. sp. nov. (Leme 9253). I. C. pseudopetiolatus (Leme 9812). J. C. santosii (Leme 9811). K. Seeds of S. cinereus (Leme 9785). L–N. Seeds of Cryptanthus. L. C. aff. beuckeri (Leme 3891). M. C. bahianus (Leme 9616). N. C. argyrophyllus (Leme 8896). O. Krenakanthus roseolilacinus (Leme 8922). P. Orthocryptanthus vasconcelosianus (Leme 8673). Bars = 5 mm (A–J). Bars = 2 mm (K–P).
FIGURE 8 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 8. Krenakanthus roseolilacinus (Leme 8922): A. Habit at type locality. B. Frontal view of the flowers. C. Lateral view of the flower. D. Petal. E. Petal, stamens, and style. F. Longitudinal section of ovary. Bars = 5 mm (Photo: A. R. Vasconcelos Leitão).
FIGURE 6 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 6. Seed coat anatomy of Krenakanthus, Orthocryptanthus (Ortcr.) and Orthophytum (Ortph.) A, C. Seed in median cross section. B, D–J: seed coat in median cross-section, in the antiraphe region. A, B. K. roseolilacinus (Leme 8922). C, D. Ortph. vagans (Leme 505). E. Ortph. compactum (Leme 5604). F. Ortph. leprosum (Leme 7897). G. Ortph. maracasense (Leme 9617). H. Ortph. pseudovagans (Leme 6821). I. Ortph. saxicola (Leme 6058). J. Ortcr. vasconcelosianus (Leme 8673). Arrow = vascular bundle. en = endosperm. r = raphe. sc = seed coat. The numbers indicate the different layers of the seed coat. 1 = endotegmen (with discontinuous elements of mesotegmen). 2 = exotegmen. 3 = endotesta. 4 = exotesta. Bars: A, C = 500 μm. B, D–J: 50 μm.
FIGURE 4. Embryo morphology. A–L in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 4. Embryo morphology. A–L. Isolated embryo in lateral view of Cryptanthus, Orthophytum, and Siqueiranthus. A. C. aff. beuckeri (Leme 3891). B. C. aff. burle-marxii (Leme 9487). C. C. pickelii (Leme 9665). D. C. colnagoi (Leme 9154). E. C. bahianus (Leme 9616). F. S. cinereus (Leme 9785). G. O. saxicola (Leme 6058). H. O. maracasense (Leme 9617). I. O. compactum (Leme 5604). J. O. pseudovagans (Leme 6821). K. O. leprosum (Leme 7897). L. O. vagans (Leme 505). cn = cotyledonary node; cot = cotyledon; h-r = hypocotyl-radicle axis. s = suspensor. Bars = 250 μm.
FIGURE 2 in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 2. Maximum clade credibility tree of a post-burnin Bayesian analysis (15 million generations), based on nuclear and plastid data only. Bayesian posterior probabilities (PP) and maximum-likelihood bootstrap support (BS) are shown (PP/BS). The scale bar below the tree shows the branch length for 0.004 substitutions per nucleotide position.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.