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1,543
datasets available to search
ShareScore release 0.9.0
Dataset results
1,543 results for “spots”
Spotting and validation of a Genome wide oligonucleotide chip with duplicate measurement of each gene
GEO Series GSE3163. Homo sapiens. 28 samples. Type: Expression profiling by array.
The base pairing RNA Spot 42 participates in a multi-output feedforward loop to help enact catabolite repression in Escherichia coli
GEO Series GSE24875. Escherichia coli; Escherichia coli str. K-12 substr. MG1655. 6 samples. Type: Expression profiling by array.
Molecular immune response of the American lobster (Homarus americanus) to the White Spot Syndrome Virus
GEO Series GSE45742. Homarus americanus. 31 samples. Type: Expression profiling by array.
A single nucleotide polymorphism in the promoter of a hairpin RNA contributes to Alternaria leaf spot resistance in apple (Malus × domestica Borkh.)
GEO Series GSE115664. Malus domestica. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptomic profiling of Melon necrotic spot virus-infected melon plants revealed virus strain and plant cultivar-specific alterations (leaf)
GEO Series GSE74838. Cucumis melo. 22 samples. Type: Expression profiling by array.
SpotClean adjusts for spot swapping in spatial transcriptomics data
GEO Series GSE178221. Homo sapiens; Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Meiotic recombination cold spots in chromosomal cohesion sites [ChIP-Seq]
GEO Series GSE52862. Saccharomyces cerevisiae. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spotted Dick Chromatin Immunopurification
GEO Series GSE2632. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by array.
Spotted long oligonucleotide arrays
GEO Series GSE344. Homo sapiens. 23 samples. Type: Expression profiling by array.
Comparing the transcriptional profiles of a Caulobacter crescentus CB15N (NA1000) wild-type to a SpoT null in carbon starvation.
GEO Series GSE21206. Caulobacter vibrioides. 6 samples. Type: Expression profiling by array.
GFP or spotted-dick RNAi treated S2 cells
GEO Series GSE2623. Drosophila melanogaster. 6 samples. Type: Expression profiling by array.
Aquaporin-1 Knockout vs Wild type Mice (Re-spot found)
GEO Series GSE2402. Mus musculus. 12 samples. Type: Expression profiling by array.
FIGURE 3 in Description of a new group of species of Edessa Fabricius, 1803 (Hemiptera: Pentatomidae: Edessinae) with translucent spot on hemelytra
FIGURE 3. Edessa bryoviridis sp. n. A–C Male, pygophore; A—dorsal view; B—posterior view; C—ventral view. D—Female, genital plates (Scale = 1mm).
FIGURE 5. Dorsal and ventral view. E. stalii A–B in Description of a new group of species of Edessa Fabricius, 1803 (Hemiptera: Pentatomidae: Edessinae) with translucent spot on hemelytra
FIGURE 5. Dorsal and ventral view. E. stalii A–B; E. translucida sp. n. C–D; E. bryoviridis sp. n. E–F; E. brunneofasciata sp. n. G–H (Scale = 5mm).
FIGURE 5. a in A new tiny-spotted species of Hypostomus (Siluriformes: Loricariidae) from the upper Rio Tocantins basin, Goiás State, Brazil
FIGURE 5. a) Hypostomus lamberti, NUP 23640, 175.5 mm SL, holotype, showing the presence of extremely small dark spots on head; b) Hypostomus affinis, live specimen (not preserved) from Rio Mucuri at downstream of UHE Santa Clara, showing moderately-sized dark spots on head; c) Hypostomus commersoni, live specimens (not preserved) from rio Lageado Fragoso (Uruguay basin) at Santa Catarina State, showing strongly developed keels on flanks and long dorsal fin.
Small spots DeepMIB project, synthetic dataset for testing 2D semantic segmentation
<p>A complete DeepMIB project with a synthetic dataset generated for quick tests of semantic segmentation approaches.<br>The dataset includes a trained U-net network for detection of small random spots of 2 colors on a black background.</p><p>The network can be opened by loading "2D_SmallSpots_3cl_Unet.mibCfg" file by</p><ul><li><i>MIB->Menu->Tools->Deep learning segmentation->Options tab->Config files->Load </i></li><li>Drag and drop of the config file into DeepMIB window</li></ul><p>Microscopy Image Browser: <a href="https://mib.helsinki.fi">https://mib.helsinki.fi</a></p>
Large spots DeepMIB project, synthetic dataset for testing 2D patch-wise segmentation
<p>A complete DeepMIB project with a synthetic dataset generated for quick tests of the patch-wise segmentation (classification) approaches<br>The dataset includes a trained Resnet18 network for detection of patches that belong to large white spots on black background.<br>The network can be opened by loading "2D_LargeSpots_Patchwise_Resnet18.mibCfg" by</p><ul><li><i>MIB->Menu->Tools->Deep learning segmentation->Options tab->Config files->Load </i></li><li>Drag and drop of the config file into DeepMIB window</li></ul><p>Microscopy Image Browser: <a href="https://mib.helsinki.fi">https://mib.helsinki.fi</a></p>
Large Spots DeepMIB project, synthetic dataset for testing 2.5D semantic segmentation
<p>A complete DeepMIB project with a synthetic dataset generated for quick tests of 2.5D semantic segmentation approaches.<br>The dataset includes trained</p><ul><li>2.5D DeepLabV3-Resnet18 depth2color (Spots_25D_DLv3RN18_Z2C_xy200z5)</li><li>2.5D U-net depth2color (Spots_25D_Unet_Z2C_xy200z5)</li></ul><p>networkd for detection of large white 3D spots on a black background. The spots that are present on a single slice only are considered as background.</p><p>The network can be opened by loading the config files "*.mibCfg" by</p><ul><li><i>MIB->Menu->Tools->Deep learning segmentation->Options tab->Config files->Load </i></li><li>Drag and drop of the config file into DeepMIB window</li></ul><p>Microscopy Image Browser: <a href="https://mib.helsinki.fi/">https://mib.helsinki.fi</a></p>
FIGURE 2 in Eucalyptus leaf spot disease caused by Coniella eucalyptorum in Sri Lanka
FIGURE 2. Coniella eucalyptorum (NIFSMC-RB-LP31) a–b Disease symptoms on the leaves of Eucalyptus camaldulensis. c–d Appearance of Conidiomata on E. camaldulensis. e Wall of conidiomata. f Conidiogenous cell. g–i Conidia. j Above view of the culture on PDA k Reverse view of the culture e = 50 μm, f–i = 20 μm.
FIGURE 1 in On further specimens of the Spotted Eastern Ghats Skink Sepsophis punctatus Beddome, 1870 (Squamata: Scincidae) from Ananthagiri hills, Northern Eastern Ghats, India
FIGURE 1. Sepsophis punctatus collage showing (a) hand-drawn illustration reproduced from Boulenger (1887), (b) entire dorsolateral, (c) entire ventral, (d) left and (e) right lateral views of the holotype. Photos: Patrick Campbell and Gernot Vogel.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.