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15,733
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15,733 results for “article”
Raw data article "Surviving adversity: exploring the presence of Lunularia cruciata (L.) Dum. on metal-polluted mining waste"
<p>This is the raw data of the article "Surviving adversity: exploring the presence of Lunularia cruciata (L.) Dum. on metal-polluted mining waste".</p>
Supplementary material for the article "Morphometric Analysis of Grape Seeds: Looking for the Origin of Spanish Cultivars"
<p>Supplementary material for:</p> <p> </p> <p><span>Morphometric Analysis of Grape Seeds: Looking for the Origin of Spanish Cultivars</span></p> <p><a><span>Francisco Emanuel Espinosa-Roldán,</span></a><span><span></span></span><span> José Luis Rodríguez-Lorenzo, José Javier Martín-Gómez, Ángel Tocino, Víctor Ruiz Martínez, Adrián Remón Elola, Félix Cabello Sáenz de Santamaría , Fernando Martínez de Toda , Emilio Cervantes and Gregorio Muñoz-Organero</span></p> <div> <span></span></div>
Supplementary videos for the article "Simulation of Somatic Evolution Through the Introduction of Random Mutation to the Rules of Conway's Game of Life"
<p><strong>List of Supplementary Videos:</strong><strong> </strong></p> <p><strong>Supplementary Video 1:</strong> Animation of simulation run in the absence of mutation (mutation rate = 0).</p> <p><strong>Supplementary Video 2:</strong> Animation of simulation run with mutation rate = 0.01 and mutation magnitude = 1.0.</p> <p><strong>Supplementary Video 3:</strong> Animation of simulation run with mutation rate = 0.05 and mutation magnitude = 6.0.</p> <p><strong>Supplementary Video 4:</strong> Animation of simulation run with a mutation rate = 0.01 and a mutation magnitude = 5.0.</p> <p><strong>Supplementary Video 5:</strong> Animation of simulation run with a mutation rate = 0.05 and a mutation magnitude = 0.5.</p> <p><strong>Supplementary Video 6:</strong> Animation of simulation run with a mutation rate = 0.05 and a mutation magnitude = 1.0.</p> <p><strong>Supplementary Video 7:</strong> Animation of simulation run with a mutation rate =0.4 and a mutation magnitude = 1.5.</p> <p><strong>Supplementary Video 8:</strong> Animation of simulation run with a mutation rate =0.1 and a mutation magnitude = 0.5.</p>
RP-Max Article
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Article: Modeling Mouse ICM - Partial Data Bank
<p>Our study presents a spatial-stochastic model for the gene regulatory network (GRN) and the signaling pathway governing cell-fate differentiation during early mouse embryogenesis, specifically at the blastocyst stage. Departing from biophysics-based models of gene regulation, we perform stochastic simulations of the biochemical processes driving early mouse embryogenesis both at the cell and tissue level. Combining these simulations with state-of-the-art AI-aided inference techniques, we successfully parameterize our model, replicating key experimental observations and providing mechanistic insights into the biochemical interactions giving rise to them. Thanks to the stochastic nature of our approach, we quantify the high robustness of ICM specification to various kinds of noise, and provide quantitative predictions for the effects of diverse experimentally testable perturbations. Altogether, we provide a deeper understanding of the intricate mechanisms driving early cell-fate decisions in mouse embryogenesis, highlighting the synergy of local cellular and broader tissue-scale interactions that shape development.</p>
Dataset related to the article 'The activation cascade of the broad-spectrum antiviral bemnifosbuvir characterized at atomic resolution'
<p>Raw data related to the scientific article "The activation cascade of the broad-spectrum antiviral bemnifosbuvir characterized at atomic resolution": </p> <ul> <li>Excel file: Numerical data related to the figures 1B, S8AB, S6B as well as Table 1. Raw data related to figure 3A and S4AB are the same than data associated with Table 1.</li> <li>PDF file: Image data of uncropped SDS-PAGE gels. </li> </ul>
Raw data for the article "Platinum-catalyzed Isomerization of Cyclopropenes to 1,3-Dienes"
<p>Raw NMR, IR and MS data for the article "Platinum-catalyzed Isomerization of Cyclopropenes to 1,3-Dienes" published in Helvetica Chimica Acta, DOI: </p> <p><a href="https://doi.org/10.1002/hlca.202400105">https://doi.org/10.1002/hlca.202400105</a> </p> <p>The number of the folders either correspond to compounds numbers in the article or the name of the folder is self-describing. All details concerning conditions and equipment for measurements can be found in the supporting information of the article. For convenience, the word file version of the supporting information can be found on the top of the raw data folder.</p>
Raw Data for Article "Metal-Free Introduction of Primary Sulfonamide into Electron Rich Aromatics"
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Data used in the article "Remote sensing of a levitated superconductor with a flux-tunable microwave cavity"
<p>Data from the manuscript, a Python-based script to create PDF figures, and the resulting PDF files for convenience are provided.</p>
Datasets supplementing journal article "A novel synthesis route with large-scale sublattice asymmetry in boron doped graphene on Ni(111)" in Surfaces and Interfaces 2024
<p>These are the datasets related to the publication "A novel synthesis route with large-scale sublattice asymmetry in boron doped graphene on Ni(111)", Surfaces and Interfaces 51 (2024) 104700 (<a href="https://doi.org/10.1016/j.surfin.2024.104700">https://doi.org/10.1016/j.surfin.2024.104700</a>).</p> <p>STM raw (.sm4, .mtrx) and analysed (.gwy) data can be opened with open source Gwyddion software (http://gwyddion.net/).</p>
Research data for journal article: Balancing Environmental and Economic Impacts in the rapidly evolving European EV Battery Value Chain
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Data and STL files supporting article: Encoding Quadrupolar Capillary Information into Saddle- Shaped Objects for Self-Assembly
<ul> <li>Data and STL files supporting the article entitled: Encoding Quadrupolar Capillary Information into Saddle-Shaped Objects for Self-Assembly</li> <li>Text files for Figures 3 and 5 are the raw positions and orientations of the particles extracted frame by frame from experimental videos. </li> <li>Text files for Figure 4 are the liquid elevation around objects.</li> <li>Figure_roughness.pdf shows zoomed-in pictures of our typical object, focusing on edge roughness for the readers to evaluate the edge roughness.</li> </ul>
DATASET for the article "Synthesis and Antibacterial Activity of Polymerizable Acryloyloxyalkyltriethyl Ammonium Salts"
<p>The files contains:</p> <p>- A visual description of the experiments performed for the synthesis of a representative polymerizable surfactant (acryloyloxyundecyltriethylammonium bromide, AUTEAB), reported in the paper published in ChemPlusChem 2017, 82, 1235-1244 (in PDF format);</p> <p>- The raw data obtained in the assessment of the biological activity of the polymerizable surfactants synthesized in the paper published in ChemPlusChem 2017, 82, 1235-1244 (in Excel format)</p> <p> </p> <p> </p>
Raw data for the article "Speed up BDD for Safety Verification in Agile Development: A Partially Replicated Controlled Experiment"
<p>This is the raw data for the paper "Speed up BDD for safety verification in Agile development: A partially replicated controlled experiment". </p>
Supplementary figures for the article 'Variability of remote sensing spectral indices in boreal lake basins'
<p><strong>Explanation of contents and notations:</strong></p> <p>AdivB Index correlations: correlations and p-values of the water quality parameters with the index family A/B, whole data and classification by basins and parameter values</p> <p>AmB Index correlations: correlations and p-values of the water quality parameters with the index family A-B, whole data and classification by basins and parameter values</p> <p>Band correlations: correlations and p-values of the water quality parameters with the band reflectances, whole data and classification by basins and parameter values</p> <p>Misc: Hiidenvesi map (basins and boat route), band wavelengths</p> <p>Mutual correlation of bands: correlations of bands with other bands, whole data and classification by basins</p> <p>Mutual correlation of parameters: correlations of water quality parameters with other water quality parameters, whole data and classification by basins</p> <p>Parameter profiles: parameter profiles of whole data, basins and parameter value classes (here e.g. Hist_30… means histogram with 30 bins)</p> <p>Scatter figures: scatter figures of various parameters vs indices</p> <p>Spectral reflectance signatures: spectral reflectance signatures of whole data, basins and parameter value classes (here e.g. Hist_30… means histogram with 30 bins)</p>
Data supplementing article "Role of baroclinic processes on flushing characteristics in a highly stratified estuarine system, Mobile Bay, Alabama" submitted to Journal of Geophysical Research: Oceans
<p>The dataset uploaded includes the model inputs and outputs, as well as the time-series of dye mass for each of the 16 numerical experiments that are tested in this study. </p>
Data for the article "Elastic strain engineering for ultralow mechanical dissipation"
<p>Device fabrication masks, raw experimental data and data processing scripts</p>
A 1-km resolution monthly mean air temperature (Ta) dataset across the Tibetan Plateau during 2001-2015, related with the article "Mapping monthly air temperature in the Tibetan Plateau from MODIS data based on machine learning methods".
<p>We present a 1-km resolution monthly mean air temperature (Ta) dataset across the Tibetan Plateau from 2001 to 2015. It ranges from 25°-45°N, 70°-105°E, covering a total area of ~7,045,000 km2. To develop this dataset, 10 machine learning algorithms were applied to 11 environmental variables derived from Moderate Resolution Imaging Spectroradiometer (MODIS) data, Shuttle Radar Topography Mission (SRTM) digital elevation model (DEM) data and topographic index data. The best model generated by Cubist algorithm was finally selected to calculate monthly mean Ta, and achieved an overall accuracy of RMSE= 1.00 °C and MAE= 0.73 °C. To get details of this dataset, please refer to the manuscript "Mapping monthly air temperature in the Tibetan Plateau from MODIS data based on machine learning methods". This Ta dataset provides spatially continuous coverage compared with station observed data, and has much higher accuracy and spatial resolution than reanalysis datasets, making it a useful dataset for climate change and environmental studies in the Tibetan Plateau.</p> <p>Xu Y., Knudby A., Shen Y., Liu Y., Mapping monthly air temperature in the Tibetan Plateau from MODIS data based on machine learning methods. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 2018, 11(2): 345-354. (DOI: 10.1109/jstars.2017.2787191).</p> <p>The Ta dataset is provided in ENVI standard format. The coordinate system is WGS84 Geographic Coordinate System.</p>
Molecular dynamic trajectory for the article "The Binding Mechanism between Inositol Phosphate (InsP) and the Jasmonate Receptor Complex: A Computational Study"
<p>Molecular dynamic trajectory preparation file of Jasmonate receptor complex. We set up six systems. </p> <p>Each system contains PSF file and PDB file.</p>
Data supplementing article "Estuarine circulation in a shallow but stratified estuary: Different responses to river discharge between deep ship channel and shoals" submitted to Journal of Geophysical Research: Oceans
<p>The dataset uploaded includes the measured salinity and velocity at two monitoring stations (one at the lower Mobile Bay and the other at the eastern edge of ship channel in middle Mobile Bay) and from multiple ship cruises crossing the lower, middle, and upper Mobile Bay. </p> <p>Detail information on the measurement frequency, date, and location can be found in the mat files. Records with bad quality are filled with NaN values. </p> <p> </p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.