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1,544
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1,544 results for “microenvironment”
Chemotherapy-induced dynamic remodeling of tumor microenvironment and cellular program in tongue squamous cell carcinoma
GEO Series GSE260953. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
TMEM16F Phospholipid Scramblase Regulates Tumorigenesis by Modulating the Tumor Immune Microenvironment
GEO Series GSE293421. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Long-term Atrazine exposure promotes ovarian dysfunction by enhancing the inflammatory microenvironment and inducing fibrosis
GEO Series GSE314111. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell sequencing reveals the immunosuppressive trajectory in the tumor microenvironment of human giant cell tumor of bone
GEO Series GSE254672. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Prostaglandin E2-EP4 signaling shapes immunosuppressive tumor microenvironment in human tumors by suppressing bioenergetics and ribosome biogenesis in infiltrating immune cells [scRNA-seq]
GEO Series GSE242271. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Glioma - Human Leukocyte Antigen Tissue Microarray. Data from: Deep Learning Glioma Grading with the Tumor Microenvironment Analysis Protocol for Comprehensive Learning, Discovering, and Quantifying Microenvironmental Features
<p>This repository contains images of Human Leukocyte Antigen Stained Tissue Microarray used for the experiments in the manuscript: Pytlarz, M., Wojnicki, K., Pilanc, P. et al. Deep Learning Glioma Grading with the Tumor Microenvironment Analysis Protocol for Comprehensive Learning, Discovering, and Quantifying Microenvironmental Features. J Digit Imaging. Inform. med. (2024). https://doi.org/10.1007/s10278-024-01008-x <br><br>Please cite this paper in case of using the data or methods described in it. <br>Data is shared for scientific research purposes only. Users must not take any actions that could compromise the privacy of the data.</p>
Construction of a necroptosis-related lncRNA signature to predict the prognosis and immune microenvironment of IDH1 wild-type GBM
<p><a href="https://zenodo.org/api/files/3b61d9b7-5c0c-4f49-acae-5ec3c5294b1e/Original%20data-Construction%20of%20a%20necroptosis-related%20lncRNA%20signature.zip">Original data</a>:Construction of a necroptosis-related lncRNA signature to predict the prognosis and immune microenvironment of IDH1 wild-type GBM.</p>
Decoding multicellular niche formation in the tumour microenvironment from nonspatial single-cell expression data
<p>Dataset related to article "Decoding multicellular niche formation in the tumour microenvironment from nonspatial single-cell expression data"</p> <p> </p> <p> </p>
Tumor microenvironment rewiring after arsenic trioxide therapy in acute promyelocytic leukemia revealed by single-cell RNA sequencing
<p>Bone marrow samples were obtained from n=15 patients were diagnosed with APL and n=6 patients have received ATO therapy. To obtain gene expression matrices for BM cells from APL samples, we aligned the FASTQ files to the human GRCh38 reference (2020-A version) using the count module of the Cell Ranger pipeline (10X Genomics, default settings, version 6.1.2). For T-cell receptor (TCR) and B-cell receptor (BCR) alignment, FASTQ files were mapped to the human vdj-GRCh38 reference (2020-A version) using the vdj module of the Cell Ranger pipeline (10X Genomics, default settings, version 6.1.2).</p>
Spatial Organization of MFAP5+ Fibroblasts within Gastric Cancer Tumor Microenvironment Predicts Better Survival
<p>This dataset contains the IMC data and code associated with <em>Spatial Organization of MFAP5+ Fibroblasts within Gastric Cancer Tumor Microenvironment Predicts Better Survival</em></p> <p>this dataset contains:</p> <ul> <li>Processed spatial single-cell data</li> <li>Code for analysis</li> </ul>
Mitochondrial components transferred by MSC-derived exosomes promoted bone regeneration under high salt microenvironment via DRP1/Wnt signaling
GEO Series GSE255467. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Fragmentation of Small-cell Lung Cancer Regulatory States in Heterotypic Microenvironments
GEO Series GSE147358. Mus musculus. 199 samples. Type: Expression profiling by high throughput sequencing.
In vivo growth of subclones derived from Lewis lung carcinoma is determined by the tumor microenvironment not intrinsic proliferative ability
GEO Series GSE216396. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
GFPT2 knockdown effects on the tumor immune microenvironment though scRNA-seq
GEO Series GSE259244. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Mucin-enriched microenvironment shapes bacteriophage protection efficacy against Pseudomonas aeruginosa in airway epithelial cells
GEO Series GSE307737. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Immune recovery in tumor microenvironment of TP53-mutated AML following venetoclax combination therapy
GEO Series GSE306339. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
IL-23 stabilizes an effector Treg program in the tumor microenvironment
GEO Series GSE224072. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Microenvironment T-Type calcium channels regulate neuronal and glial processes in glioblastoma
GEO Series GSE273629. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
HDACi promotes inflammatory remodeling of the tumor microenvironment to enhance epitope spreading and antitumor immunity
GEO Series GSE179337. Mus musculus. 24 samples. Type: Expression profiling by array.
Transcriptomic and metabolic effect of immune checkpoint inhibitors on cellular components in renal cell tumor microenvironment and in Sunitinib resistant renal cell carcinoma [II]
GEO Series GSE226967. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.