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[ITU-T AI Challenge] Input/Output of project "Improving the capacity of IEEE 802.11 WLANs through Machine Learning"
<p>This data set will be used by participants of the ITU-T AI Challenge. </p> <p>The data set contains:</p> <ul> <li>Input files: contain information such as nodes labels, nodes position, or channels used. These files have been used to simulate the behavior of random WLAN deployments under different channel bonding conditions. </li> <li>Output files: contain the output of the simulations - throughput per STA, RSSI that each STA receives from its AP, interference map from APs' point of view, average SINR experienced by each device during packet receptions.</li> </ul> <p>More details can be found on the official website of the challenge: <a href="https://www.upf.edu/web/wnrg/ai_challenge">https://www.upf.edu/web/wnrg/ai_challenge</a></p> <p><strong>[Update - 28 July 2020] </strong>A script (<a href="https://zenodo.org/api/files/88053224-d3a9-417e-b034-f08c763069ac/script_process_dataset.sh?versionId=2817eabd-ab9e-496a-a7d6-f67d227c51bf">script_process_dataset.sh</a>) has been added to process the output files. In particular, the results of each deployment are separated into different files. Besides, different files are created according to the type of label/feature (throughput, airtime, RSSI map, and interference list).</p> <p><strong>[Update - 22 September 2020] </strong>A new feature has been added to all the files in the data set. In particular, we have added the average Signal-to-Interference-plus-Noise Ration (SINR) experienced by each STA during packet receptions (including data and control packets). The SINR values in APs are marked as Inf because we focus on downlink transmissions only.</p> <p><strong>[Update - 30 September 2020] </strong>The test data set has been released, which corresponds to the simulations of a set of deployments with different characteristics. Input node files are contained in <a href="https://zenodo.org/api/files/88053224-d3a9-417e-b034-f08c763069ac/input_node_files_test.zip">input_node_files_test.zip</a>, while <a href="https://zenodo.org/api/files/88053224-d3a9-417e-b034-f08c763069ac/output_simulator_test.zip">output_simulator_test.zip</a> includes the output generated by the simulator. The label (i.e., the throughput) of the test data set will not be included in this repository until the next update (estimated date: 15 October 2020).</p> <p><strong>[Update - 19 October 2020] </strong>After participants have submitted their solutions, we provide the entire test data set, including the actual throughput obtained by each AP and STA in the test deployments.</p>
Expert VIsion Chat - Social Media Issues, Challenges and Requirements
<p>Expert VIsion Chat - Social Media Issues, Challenges and Requirements. We took questions from end users across Europe, US and India</p>
Integrated analysis of circRNA-miRNA-mRNA of Sebastes schlegelii following Edwardsiella tarda challenge
<p><i>Sebastes schlegelii</i>, an important aquaculture species, has been widely cultured in East Asian countries. With the increase in the cultivation scale, various diseases have become major threats to the industry. Evidence has shown that non-coding RNAs (ncRNAs) have remarkable functions in the interactions between pathogens and their hosts. However, little is known about the mechanisms of circular RNAs (circRNAs) and coding RNAs in the process of preventing pathogen infection in the intestine in teleosts. In this study, we aimed to uncover the global landscape of mRNAs, circRNAs, and microRNAs (miRNAs) in response to <i>Edwardsiella tarda</i> infection at different time points (0, 2, 6, 12, and 24 h), and to construct regulatory networks for exploring the immune regulatory mechanism in the intestine of <i>S. schlegelii. </i>In total, 1,794 mRNAs, 87 circRNAs, and 79 miRNAs were differentially expressed. Some of the differentially expressed RNAs were quantitatively validated using qRT-PCR. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that most of the differentially expressed mRNA genes and the target genes of ncRNAs were related to immune signaling pathways, such as the NF-κB signal pathway, pathogen recognition receptors related to signaling pathways (Toll-like receptors and Nod-like receptors), and the chemokine signaling pathway. Based on these differentially expressed genes, 624 circRNA-miRNA pairs and 2,694 miRNA-mRNA pairs were predicted using the miRanda software. Integrated analyses generated 25 circRNA-miRNA-mRNA interaction networks. In a novel_circ_0004195/novel-530/<i>IκB</i> interaction network, novel_530 was upregulated, while its two targets, novel_circ_0004195 and <i>IκB</i>, were downregulated after <i>E. tarda</i> infection. In addition, two circRNA-miRNA-mRNA networks related to <span>apoptosis</span> (novel_circ_0003210/novel_152/apoptosis-stimulating of p53 protein 1) and interleukin (novel_circ_0001907/novel_127/interleukin-1 receptor type 2) were also identified in our study. We thus speculated that the downstream NF-κB signaling pathway, p53 signaling pathway, and apoptosis might play vital roles in the immune response in the intestine of <i>S. schlegelii.</i> This study revealed a landscape of RNAs in the intestine of <i>S. schlegelii</i><i> </i>during <i>E. tarda </i>infection<b> </b>and provided clues for further study on the immune mechanisms and signaling networks based on <i>the circRNA-miRNA-mRNA axis in </i><i>S. schlegelii</i>.</p>
Figure 38 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 38 Pegophysema cf. philippiana (Reeve, 1850), Palmachim, Israel, Shafdan project (sample 24(B)): right valve outer (A) and dorsal (B) views. The pink hue is due to staining with eosin solution. Photograph courtesy S. Bartolini. Scale bar: 5 mm.
Figure 40 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 40 Nudiscintilla cf. glabra Lützen & Nielsen, 2005 (sensu Mifsud and Ovalis 2012) A–E Nahariyya, Israel, HELM project (sample D7): outer (A) and inner (B) views, detail of hinge (C) and hinge in dorsal view (D, E) of right valve F, G Palmachim, Israel, HELM project (sample H17): right (F) and left (G) valve outer views. Scale bars: 3 mm (A, B); 0.5 mm (C, D); 0.2 mm (E); 1 mm (F, G).
Figure 37 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 37 Isognomon aff. australica (Reeve, 1858) (sensu Angelidis and Polyzoulis 2018) A, B, D, E Esentepe, Cyprus (sample NCY3H): left valve outer (A) and inner (B) views, right valve inner (D) and outer (E) views C, F Plakias, Crete (sample Rh.05_4M): left (C) and right (F) valve outer views. Scale bars: 2 mm.
Figure 6 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 6 Coriophora lessepsiana Albano, Bakker & Sabelli, sp. nov. A–J holotype, NHMW-MO-113282, dive site "Blue Hole", Dahab, Sinai, Egypt: front (A, B), side (C, D) and back (E) views, nucleus (F), protoconch (G, H) and peristome (I, J) K, M paratype 1, OLML LIEV 2019/70/1, dive site "Tigerhouse", Dahab, Sinai, Egypt: front (K), side (L) and back (M) views. N, ONHMW-MO-112930/LM/0169, west of Rosh HaNikra Islands, Israel (Mediterranean), HELM project (sample S52_2M): front (N) and side (O) views. Scale bars: 0.5 mm (A–E, K–O); 0.1 mm (F); 0.2 mm (G, H); 0.3 mm (I, J).
Figure 43 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 43 Iacra seychellarum (A. Adams, 1856), Kos Island, Greece, RMNH.MOL.342632: left valve outer (A) and inner (B) views, hinge (C). Photograph courtesy T. van Haaren. Scale bar: 2 mm (A, B); 1 mm (C).
Figure 32 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 32 Arcuatula perfragilis (Dunker, 1857), Palmachim, Israel, Shafdan project. Left valve outer view. The pink hue is due to staining with eosin solution. Photograph courtesy S. Bartolini. Scale bar: 2 mm.
Figure 3 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 3 Skeneidae indet., Akko, Israel: apical (A, B), front (C, F), side (D, E), umbilical (G, H) and back (I) views, protoconch (J). Scale bars: 0.5 mm (A–I); 0.1 mm (J).
Figure 31 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 31 Atys angustatus E.A. Smith, 1872, Plakias, Crete, Greece (sample Rh.15_5M): front view. Scale bar: 0.5 mm.
Figure 29 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 29 Turbonilla funiculata de Folin, 1868, west of Rosh HaNikra Islands, Israel, HELM project (sample S52_2F): front (A, B) and back (C, D) views, detail of the sculpture on the base (E), aperture (F), detail of the sculpture on the back of the third whorl (G), apical (H) and side (I) views of the protoconch. Scale bars: 0.5 mm (A–D); 0.1 mm (E, H, I); 0.2 mm (F, G).
Figure 27 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 27 Parthenina typica (Laseron, 1959), Palmachim, Israel, Shafdan project: front (A, B) and back (C, D) views, apex (E) and apical view of the protoconch (F). Scale bars: 0.4 mm (A–D); 0.1 mm (E, F).
Figure 9 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 9 Comparison between Cerithiopsis pulvis (Issel, 1869) and Cerithiopsis sp. aff. pulvis. A–CCerithiopsis pulvis, Ashqelon, Israel, HELM project (sample S16_1F): front (A), side (B) and back (C) views. D–FCerithiopsis sp. aff. pulvis, NHMW-MO-112930/LM/0174, Ashqelon, Israel, HELM project (sample S59_3F): front (D), side (E) and back (F) views. Scale bars: 0.5 mm.
Figure 34 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 34 Comparison between Musculus coenobitus (Vaillant, 1865) and Musculus subpictus (Cantraine, 1835) A–DMusculus coenobitus, north of Nahariyya port, Israel, HELM project (sample H3): right valve outer (A) and inner (D) views, left valve inner (B) and outer (C) views E–HMusculus subpictus, off Filfla, Malta: right valve outer (E) and inner (H) views, left valve inner (F) and outer (G) views. Scale bars: 5 mm.
Figure 26 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 26 Comparison between Parthenina cossmanni (Hornung & Mermod, 1924) and Parthenina indistincta (Montagu, 1808) A–FParthenina cossmanni, north of Atlit, Israel, HELM project (sample NG30_2F): front (A, C) and back (B, D) views, detail of the spiral sculpture on the body whorl (E) and apical view of the protoconch (F) G, HParthenina cossmanni, Ashqelon, Israel, HELM project (sample SG20_4F): front (G) and back (H) views I–LParthenina indistincta, Ashqelon, Israel, HELM project (sample SC30_1_15L): front (I, K) and back (J, L) views. Scale bars: 0.5 mm (A–E, G–L); 0.1 mm (F).
Figure 4 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 4 Fossarus sp. (aff. aptus sensu Blatterer, 2019), Ashqelon, Israel, HELM project (sample S58_3M): front (A), side (B) and back (C) views. Scale bar: 1 mm.
Figure 36 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 36 Comparison between Musculus aff. viridulus (H. Adams, 1871) and Musculus costulatus (Risso, 1826) A–EMusculus aff. viridulus, west of Rosh HaNikra Islands, Israel, HELM project (sample S52_3L): left valve outer (A, B) and inner (D) views, right valve inner (C) and outer (E) views F–HMusculus aff. viridulus, dive site "Caves", Dahab, Sinai, Egypt: left valve outer (F, G) and inner (H) views I–MMusculus costulatus, west of Rosh HaNikra Islands, Israel, HELM project (sample S53_2L): left valve outer (I, J) and inner (L) views, right valve inner (K) and outer (M) views. Scale bars: 1 mm.
Figure 25 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 25 Comparison between Oscilla virginiae Peñas, Rolán & Sabelli, 2020 and Miralda sp. A, BOscilla virginiae, west of Rosh HaNikra Islands, Israel, HELM project (sample S53_1F): front (A) and back (B) views C, DMiralda sp. (Oscilla jocosa sensu van Aartsen et al. (1989)), west of Rosh HaNikra Islands, Israel, HELM project (sample S52_1F): front (C) and back (D) views. Scale bars: 0.5 mm.
Figure 24 from: Albano PG, Steger J, Bakker PAJ, Bogi C, Bošnjak M, Guy-Haim T, Huseyinoglu MF, LaFollette PI, Lubinevsky H, Mulas M, Stockinger M, Azzarone M, Sabelli B (2021) Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification. ZooKeys 1010: 1-95. https://doi.org/10.3897/zookeys.1010.58759
Figure 24 Odostomia (s.l.) sp. 2, Neve Yam, Atlit, Israel: front (A, B), side (C, D) and back (E, F) views, apex (G) and apical view of the protoconch (H). Scale bars: 0.5 mm (A–F); 0.2 mm (G, H).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.