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1,574
datasets available to search
ShareScore release 0.9.0
Dataset results
1,574 results for “genome sequencing”
Whole genome sequencing of T and ITNK cells
GEO Series GSE143367. Homo sapiens. 4 samples. Type: Other.
Large-scale genomic alterations identified in cancer patients on the course of cancer recovery with complementary Huaier treatment identified by total RNA- and small non-coding RNA-sequencing.
GEO Series GSE157086. Homo sapiens. 184 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Whole Genome Bisulfite Sequencing Facilitates Quantitative Analysis of DNA Methylation status in sperm from 2 month old and 18 month old mice
GEO Series GSE141249. Mus musculus. 5 samples. Type: Methylation profiling by high throughput sequencing.
Next Generation Sequencing: in vivo genome-wide CRISPR sgRNA screen in primary cancer-initiating and propagating bcCML stem cells
GEO Series GSE135300. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transfer of mitochondrial DNA into the nuclear genome during gene editing [target sequencing]
GEO Series GSE261865. Homo sapiens. 15 samples. Type: Other.
DAXX genome binding/occupancy profiling by high throughput ChIP sequencing
GEO Series GSE190783. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide mapping of epigenetic modification of 5-formylcytosine at single-base resolution by chemical labeling enrichment and deamination sequencing
GEO Series GSE239943. Mus musculus. 2 samples. Type: Methylation profiling by high throughput sequencing.
10x genomics single cell sequencing of yak testis at different developmental stages
GEO Series GSE260885. Bos grunniens; Bos grunniens x Bos taurus. 6 samples. Type: Expression profiling by high throughput sequencing.
Comparative multi-omic analyses of Trichinella Pseudospiralis based on a new genome assembly by long-read sequencing
GEO Series GSE113105. Trichinella pseudospiralis. 6 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data
GEO Series GSE77961. Mus musculus. 16 samples. Type: Methylation profiling by high throughput sequencing.
Identification of conserved miRNAs in Petunia axillaris and P. inflata young flower buds and their verification in the Petunia genome sequence
GEO Series GSE297973. Petunia axillaris; Petunia integrifolia subsp. inflata. 11 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Genome sequences of Chlorella sorokiniana UTEX 1602 and Micractinium conductrix SAG 241.80: implications to maltose excretion by a green alga
GEO Series GSE98781. Chlorella sorokiniana; Micractinium conductrix. 12 samples. Type: Expression profiling by high throughput sequencing.
Next-generation sequencing Facilitates Quantitative Analysis of Wild Type and EED-/- mice cerebellum Transcriptomes and Genome-wide maps of chromatin state in Wild Type and EED-/- mice cerebellum
GEO Series GSE169312. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide RNA sequencing on myeloid derived suppressor cells from mice treated with lymphodepleting chemotherapy reveals distinct IL-6 driven regulatory patterns
GEO Series GSE136639. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of E. coli MukB distribution using ChIP-sequencing
GEO Series GSE67221. Escherichia coli K-12. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
10X genomics single cell sequencing of sheep testis (6 months-old)
GEO Series GSE211919. Ovis aries. 1 samples. Type: Expression profiling by high throughput sequencing.
Childhood Cancer Data Initiative (CCDI): Comprehensive Genomic Sequencing of Pediatric Cancer Cases (CMRI/KUCC)
This study provides paired tumor normal genomic sequencing data from approximately 200 children with cancer, including both solid tumors and leukemias, done by the Children's Mercy Research Institute (CMRI) and University of Kansas Cancer Center (KUCC). These data include whole genome sequencing, whole exome sequencing, bulk RNA sequencing, and single-cell RNA and ATAC sequencing. Additional phenotypic, pathologic, and genetic data, gathered clinically for these samples, are also provided.
Burkitt Lymphoma Genome Sequencing Project
The goal of the Burkitt Lymphoma Genome Sequencing Project (BLGSP) is to explore genetic changes in patients with Burkitt lymphoma and uncover knowledge that could lead to better prevention, detection, and treatment of this rare and aggressive cancer. The Center for Cancer Genomics at NCI initiated BLGSP in collaboration with the Foundation for Burkitt Lymphoma Research. The molecular characterization data from Burkitt lymphoma patients identified through BLGSP will be available to the research community worldwide in a publicly available, yet patient privacy-protected database. Burkitt lymphoma is a type of non-Hodgkin lymphoma that occurs most often in children and young adults. It is associated with a chromosomal translocation of the MYC gene to one of the three immunoglobulin loci. Burkitt lymphoma is divided into three main clinical variants: endemic, sporadic, and immunodeficiency-associated. These variants are generally distinguishable by previous exposure to viral infection, tumor location, and geographic location of the patients, although there are exceptions. Current chemotherapy regimens are effective in approximately 40%-90% of patients. Treatment success depends on age, stage of the disease, treatment regimen, and site of the treatment facility. The variability of tumor response demonstrates the need for new treatments to improve patient outcomes and quality of life.
Discovery of novel recurrent mutations and rearrangements in early T-cell precursor acute lymphoblastic leukemia by whole genome sequencing
Early T-cell precursor acute lymphoblastic leukaemia (ETP ALL) is an aggressive malignancy of unknown genetic basis. We performed whole genome sequencing of tumour and normal DNA from 12 children with ETP ALL and assessed the frequency of somatic alterations in 52 ETP and 42 non-ETP T-ALL samples by sequencing and DNA copy number analysis.
Genomic Sequencing of Pediatric Rhabdoid Cancers
In this study, we sequenced the exomes of 35 rhabdoid tumors, highly aggressive cancers of early childhood. This study is part of a larger effort to characterize pediatric cancers as part of the Slim Initiative for Genomic Medicine (SIGMA) project.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.