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12,393 results for “materiality”
Suplementary material - Occurrences of Braconidae in Brazil
<p>This spreadsheet is the result of compiling data from published articles and databases on the occurrence of Braconidae parasitoids in Brazil.</p>
Supplementary material - Non-invasive Multimodal Imaging Reveals Early Therapy-Induced Senescence in Human Cancer Cells
<p>The repository features .xls and .txt worksheets including all the data used through this work and reported in the manuscript figures and graphs. More precisely, we included the following: </p> <ul> <li>Figure 2. Raw pixel-wise signals detected in NLO images of TIS cells control cells that were used to perform the colocalization graphs and analyses reported. We describe the average colocalization of SRS and F-CARS signals, and TPEF and E-CARS signals, in both phenotypes.</li> <li>Figure 4. Raw data from image analyses of TPEF and SRS channels of multimodal NLO images, divided in 5 different time points over the therapy follow-up period. The data describe the early rearrangement of mitochondria (TPEF) and lipid vesicles (SRS) in TIS cells, with respect to control counterparts.</li> <li>Figure 6. Raw data from image analyses of QPI images, divided in 4 different time points over the therapy follow-up period. The data describe the early morphological modifications of TIS cells, with respect to control counterparts.</li> </ul>
Supplementary material - Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses
<p>Supplementary material containing the raw Broadband CARS data presented in the manuscript entitled "Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses".</p>
Data and code for the research work "Disentangling material, social, and cognitive determinants of human behavior and belief".
<p>This repository contains data files and Matlab and R code for the research work "Disentangling material, social, and cognitive determinants of human behavior and belief".</p>
Training material for the mapping and quantification of single-cell ATAC-seq 10X Datasets
<p>The data provided here is part of the Galaxy Training Network tutorial that analyses 10x genomics single-cell ATAC-seq data from the 10x platform. The original data is from 1k Peripheral Blood Mononuclear Cells (PBMCs) from a Healthy Donor.</p> <p>Due to time constraints during training, the datasets were subsampled to reads that map to chromosome 21 only.</p> <p>The 10x Genomics Datasets follow the <a href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution</a> license.</p> <p>There is an additional count matrix in Anndata format created from full datasets.</p>
Supplemental Material 2023: Bone turnover in lactating and nonlactating women
<p><strong>Suppl. Fig 1 </strong>Serum total Ca (<strong>A</strong>) and Serum P (<strong>B</strong>) at the respective visit. Exclusively breastfeeding (exc-bf) and nonexclusively breastfeeding (nonexc-bf) mothers were compared with controls at each visit. Results of multivariate analyses. Grey lines indicate reference levels. Total Ca and P levels were significantly higher in exc-bf and nonexc-bf mothers compared with controls (all <em>p</em>s < .001).</p> <p> </p> <p><strong>Suppl. Table 1 </strong>Case numbers of the lactation and control cohorts depending on the parameter measured.</p> <p><strong>Suppl. Table 2</strong> Means (SD) are presented for each parameter for the respective cohort and visit. </p>
LFY ChIP-SEQ analysis Galaxy Training Material
<p>Datasets for Galaxy Training on ChIP-SEQ analysis. Raw files can be downloaded from SRA project SRP051214</p>
Training data for 'Genome annotation with Funannotate' tutorial (Galaxy Training Material)
<p>The data provided here are part of a Galaxy Training Network tutorial for genome annotation with funannotate.</p> <p>Genome was assembled following the GTN Flye assembly tutorial, then masked with RepeatMasker.</p> <p>RNASeq data: SRR8534859 reads were mapped to the genome using STAR (toolshed.g2.bx.psu.edu/repos/iuc/rgrnastar/rna_star/2.7.8a+galaxy0), then the bam was downsampled (10% with toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_DownsampleSam/2.18.2.1) to reduce the size of the dataset. Fastq files were then extracted from the resulting bam file (toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_SamToFastq/2.18.2.1).</p> <p>SwissProt_subset.fasta is a subset of SwissProt proteins that are known to have some similarity with the genome (found using Diamond against the genome, then extracting sequences matching with e-value < 0.0001).</p>
Figure S50 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S50. Optimisation of tropical and temperate niches across the Mimosoid phylogeny. Ancestral niches were estimated using a complete metachronogram for Caesalpinioideae, including non-Mimosoid Caesalpinioideae taxa, but only the Mimosoid clade is shown here.
Figure S48 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S48. Speciation rates estimated across the Caesalpinioideae metachronogram under eight scenarios with different fixed extinction rates. Extinction rates are shown above each subfigure, while speciation rates are indicated by branch colours.
Figure S49 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S49. Top: Speciation rates in the Mimosoid clade through time, estimated under different extinction rate scenarios using BAMM. Middle: Paleotemperature inferred from delta O18 measurements, using data from Zachos et al. (179). Bottom: Phenogram of mean annual precipitation in the Mimosoid clade through time. Coloured lines with dots show the median, wettest, and driest reconstructed rainfall niche of all nodes in the phylogeny per time bin of one million years.
Figure S47 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S47. Ancestral range estimation of Caesalpinioideae, performed using BioGeoBEARS with the best-fitting model (i.e., DEC+J). Trans-oceanic dispersal events in the Mimosoid clade, based on a model with seven regions, are indicated with numbered green circles.
Figure S46 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S46. Optimisation of dry season length across the Mimosoid phylogeny. Inset shows the fraction of dry season length niche shifs per speciation event through time. See caption Figure 1 for explanation.
Figure S45 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S45. Variation partitioning results obtained using the genus-level Mimosoid phylogeny (rather than the metachronogram). See caption Figure 2 for explanation.
Figure S42 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S42. Phyloregionalization per continent using the metachronogram, showing global distribution of isohyets. Caption otherwise as for Figure 3.
Figure S30 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S30 (right). Conflict and concordance among the 821 single-copy gene trees for each bipartition mapped onto the single-copy genes ASTRAL species tree (Figure S14). Pie charts show the fraction of gene trees supporting that bipartition in blue, the fraction of gene trees supporting the most likely alternative configuration in green, the fraction of gene trees supporting additional conflicting configurations in red, and the fraction of uninformative gene trees in grey. Numbers above and below the pie charts indicate the total number of gene trees supporting and conflicting the bipartition, respectively. Branch lengths are set equal for easier visualisation.
Figure S22 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S22. Phylogeny of Caesalpinioideae. RAxML species tree based on the amino acid alignment of all genes with orthology assessment. Bootstrap support values are only shown for nodes with <100% bootstrap support.
Figure S27 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S27. Tanglegram comparing the PhyloBayes phylogeny (Figure S23) with the RAxML amino acid single-copy genes phylogeny (Figure S20).
Figure S37 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S37. Phyloregionalization of South America using the metachronogram. Subfigures show clustering results with two to eight phyloregions, as well as the results of phyloregionalization analyses using the geographic residuals of phylogenetic turnover, and ancient phylogenetic turnover with a cut-off of 5, 10, and 20 million years.
Figure S21 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S21. Phylogeny of Caesalpinioideae. RAxML species tree based on the amino acid alignment of all genes without orthology assessment. Bootstrap support values are only shown for nodes with <100% bootstrap support.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.