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Measurement report: Crustal materials play an increasing role in elevating particle pH: Insights from 12-year records in a typical inland city of China-Data
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Data from: The effects of timing of grazing on plant and arthropod communities in high-elevation grasslands
Livestock grazing can be used as a key management tool for maintaining healthy ecosystems. However, the effectiveness of using grazing to modify habitat for species of conservation concern depends on how the grazing regime is implemented. Timing of grazing is one grazing regime component that is less understood than grazing intensity and grazer identity, but is predicted to have important implications for plant and higher trophic level responses. We experimentally assessed how timing of cattle grazing affected plant and arthropod communities in high-elevation grasslands of southwest Montana to better evaluate its use as a tool for multi-trophic level management. We manipulated timing of grazing, with one grazing treatment beginning in mid-June and the other in mid-July, in two experiments conducted in different grassland habitat types (i.e., wet meadow and upland) in 2011 and 2012. In the upland grassland experiment, we found that both early and late grazing treatments reduced forb biomass, whereas graminoid biomass was only reduced with late grazing. Grazing earlier in the growing season versus later did not result in greater recovery of graminoid or forb biomass as expected. In addition, the density of the most ubiquitous grassland arthropod order (Hemiptera) was reduced by both grazing treatments in upland grasslands. A comparison of end-of-season plant responses to grazing in upland versus wet meadow grasslands revealed that grazing reduced graminoid biomass in the wet meadow and forb biomass in the upland, irrespective of timing of grazing. Both grazing treatments also reduced end-of-season total arthropod and Hemiptera densities and Hemiptera biomass in both grassland habitat types. Our results indicate that both early and late season herbivory affect many plant and arthropod characteristics in a similar manner, but grazing earlier may negatively impact species of conservation concern requiring forage earlier in the growing season.
Data from: The role of selection and historical factors in driving population differentiation along an elevational gradient in an island bird
Adaptation to local environmental conditions and the range dynamics of populations can influence evolutionary divergence along environmental gradients. Thus, it is important to investigate patterns of both phenotypic and genetic variation among populations to reveal the respective roles of these two types of factors in driving population differentiation. Here, we test for evidence of phenotypic and genetic structure across populations of a passerine bird (Zosterops borbonicus) distributed along a steep elevational gradient on the island of Réunion. Using eleven microsatellite loci screened in 401 individuals from 18 localities distributed along the gradient, we found that genetic differentiation occurred at two spatial levels: (i) between two main population groups corresponding to highland and lowland areas, respectively, and (ii) within each of these two groups. In contrast, several morphological traits varied gradually along the gradient. Comparison of neutral genetic differentiation (FST) and phenotypic differentiation (PST) showed that PST largely exceeds FST at several morphological traits, which is consistent with a role for local adaptation in driving morphological divergence along the gradient. Overall, our results revealed an area of secondary contact mid-way up the gradient between two major, cryptic, population groups likely diverged in allopatry. Remarkably, local adaptation has shaped phenotypic differentiation irrespective of population history, resulting in different patterns of variation along the elevational gradient. Our findings underscore the importance of understanding both historical and selective factors when trying to explain variation along environmental gradients.
Data from: The species richness pattern of vascular plants along a tropical elevational gradient and the test of elevational Rapoport's rule depend on different life‐forms and phytogeographic affinities
The research about species richness pattern and elevational Rapoport's rule (ERR) have been carried out mostly in the temperate regions in the recent years and scarcely in the tropical mountains; meanwhile, it is unclear whether the ERR is consistent among different life‐forms and phytogeographic affinities. Here, we compiled a database of plant species of Mount Kenya, a tropical mountain of East Africa, and divided these species into twelve groups depending on the life‐form and phytogeographic affinity of each species. We inspected the species richness pattern of each group along the elevation gradient and also tested ERR of each group using Stevens' method. Our results showed that species richness of the total species showed a positively skewed (hump‐shaped) pattern along the elevation gradient and different life‐forms and phytogeographic affinities showed similar hump‐shaped patterns as the total species. The average elevation range size of the total species and herbaceous species showed increasing patterns along the elevation gradient, while lycophytes and ferns, and woody species showed an obvious downward trend after peaking in the high elevation regions. We concluded that the widely distributed herbaceous species which also have broad elevation range sizes are more applicable to ERR, while the narrowly distributed woody species with small elevation range sizes occurring in the higher elevations could reverse ERR. Therefore, we concluded that the ERR is not consistent among different organisms in the same region.
Data from: Survival and reproductive costs of repeated acute glucocorticoid elevations in a captive, wild animal
Organisms are continuously encountering both predictable and unpredictable ecological stressors within their environment. The activation of the hypothalamic-pituitary-adrenal (stress) axis is a fundamental process allowing animals to cope with and respond to such encounters. A main consequence of HPA axis activation is the release of glucocorticoid hormones. Although short-term glucocorticoid elevations lead to changes in physiological and behavioral processes that are often adaptive, our understanding of fitness consequences of repeated acute elevations in glucocorticoid hormones over a longer time period is largely lacking. This is of particular current importance as animals are facing a significant increase in exposure to stressors including those associated with human-induced rapid environmental change. Here, we test fitness-relevant consequences of repeated exposure to glucocorticoids in the absence of natural challenges, by treating wild-caught gravid female eastern fence lizards (Sceloporus undulatus) with a daily transdermal dose of a glucocorticoid hormone until laying. This treatment causes an increase in plasma glucocorticoids that mimics the natural response lizards have when they encounter a stressor in the wild, without confounding effects associated with the encounter itself. This treatment reduced females' reproductive success (hatching success) and survival. Further, glucocorticoid-induced reductions in reproductive success were greater when females had experienced higher temperatures the previous winter. This demonstrates the potential significant consequences of repeated exposure to acute elevations in glucocorticoid hormones. Additionally, the costs of repeated glucocorticoid elevation may be further exaggerated by an individual's previous experience, such as the potential compounding effects of winter warming increasing animals' vulnerability to increased glucocorticoid levels during spring breeding.
Data from: Coffee berry borer (Hypothenemus hampei) (Coleoptera: Curculionidae) development across an elevational gradient on Hawai'i Island: applying laboratory degree-day predictions to natural field populations
Coffee berry borer (CBB, Hypothenemus hampei) (Coleoptera: Curculionidae: Scolytinae) is the most destructive pest of coffee worldwide. Information on CBB development times can be used to predict the initiation of new infestation cycles early in the coffee-growing season and thus inform the timing of insecticide applications. While laboratory estimates of CBB development under constant conditions exist, they have not been applied under the heterogeneous environmental conditions that characterize many coffee-growing regions. We measured CBB development times and abundance in commercial coffee farms across an elevational gradient on Hawai'i Island and applied thermal accumulation models from previous laboratory studies to test their fit to field data. Artificial lures were used to infest coffee berries at five farms ranging in elevation from 279-792 m, and weather variables were monitored at macro (farm-level) and micro (branch-level) scales. CBB development was followed in the field from the time of initial berry infestation by the founding female through the development of F1 mature adults. Mean development time from egg to adult across all sites was 38.5 ± 3.46 days, while the mean time required for the completion of a full life cycle (from time of infestation to presence of mature F1 females) was 50.9 ± 3.35 days. Development time increased with increasing elevation and decreasing temperature. Using macro-scale temperature data and two different estimates for the lower temperature threshold (14.9°C and 13.9°C), we estimated a mean requirement of 332 ± 14 degree-days and 386 ± 16 degree-days, respectively, from the time of berry infestation to the initiation of a new reproductive cycle in mature coffee berries. Similar estimates were obtained using micro-scale temperature data, indicating that macro-scale temperature monitoring is sufficient for life-cycle prediction. We also present a model relating elevation to number of CBB generations per month. Our findings suggest that CBB development times from laboratory studies are generally applicable to field conditions on Hawai'i Island and can be used as a decision support tool to improve IPM strategies for this worldwide pest of coffee.
Data from: Subtle changes in elevation shift bat-assemblage structure in Central Amazonia
The distribution patterns of animal species at local scales have been explained by direct influences of vegetation structure, topography, food distribution and availability. However, these variables can also interact and operate indirectly on the distribution of species. Here, we examined the direct and indirect effects of food availability (fruits and insects), vegetation clutter and elevation in structuring phyllostomid-bat assemblages in a continuous terra firme forest in Central Amazonia. Bats were captured in 49 plots over 25-km² of continuous forest. We captured 1138 bats belonging to 52 species with 7056 nethours of effort. Terrain elevation was the strongest predictor of species and guild compositions, and of bat abundance. However, changes in elevation were associated with changes in vegetation clutter, and availability of fruits and insects consumed by bats, which are likely to have had direct effects on bat assemblages. Frugivorous-bat composition was more influenced by availability of food-providing plants, while gleaning-animalivore composition was more influenced by the structural complexity of the vegetation. Although probably not causal, terrain elevation may be a reliable predictor of bat-assemblage structure at local scales in other regions. In situations where it is not possible to collect local variables, terrain elevation can substitute other variables, such as vegetation structure, and availability of fruits and insects.
Data from: Phenological mismatch drives selection on elevation, but not on slope, of breeding time plasticity in a wild songbird
Phenotypic plasticity is an important mechanism for populations to respond to fluctuating environments, yet may be insufficient to adapt to a directionally changing environment. To study whether plasticity can evolve under current climate change, we quantified selection and genetic variation in both the elevation (RNE) and slope (RNS) of the breeding time reaction norm in a long-term (1973–2016) study population of great tits (Parus major). The optimal RNE (the caterpillar biomass peak date regressed against the temperature used as cue by great tits) changed over time, whereas the optimal RNS did not. Concordantly, we found strong directional selection on RNE, but not RNS, of egg-laying date in the second third of the study period; this selection subsequently waned, potentially due to increased between-year variability in optimal laying dates. We found individual and additive genetic variation in RNE but, contrary to previous studies on our population, not in RNS. The predicted and observed evolutionary change in RNE were, however, marginal, due to low heritability and the sex limitation of laying date. We conclude that adaptation to climate change can only occur via micro-evolution of RNE, but this will necessarily be slow and potentially hampered by increased variability in phenotypic optima.
Data from: Peripheral TNFa elevations in abstinent alcoholics are associated with Hepatitis C infection
Substantial evidence supports the view that inflammatory processes contribute to brain alterations in HIV infection. Mechanisms recently proposed to underlie neuropathology in Alcohol Use Disorder (AUD) include elevations in peripheral cytokines that sensitize the brain to the damaging effects of alcohol. This study included 4 groups: healthy controls, individuals with AUD (abstinent from alcohol at examination), those infected with HIV, and those comorbid for HIV and AUD. The aim was to determine whether inflammatory cytokines are elevated in AUD as they are in HIV infection. Cytokines showing group differences included interferon gammainduced protein 10 (IP-10) and tumor necrosis factor α (TNFα). Follow-up t-tests revealed that TNFα and IP-10 were higher in AUD than controls but only in AUD patients who were seropositive for Hepatitis C virus (HCV). Specificity of TNFα and IP10 elevations to HCV infection status was provided by correlations between cytokine levels and HCV viral load and indices of liver integrity including albumin/globulin ratio, fibrosis scores, and AST/platelet count ratio. Because TNFα levels were mediated by HCV infection, this study provides no evidence for elevations in peripheral cytokines in "uncomplicated", abstinent alcoholics, independent of liver disease or HCV infection. Nonetheless, these results corroborate evidence for elevations in IP-10 and TNFα in HIV and for IP-10 levels in HIV+HCV coinfection.
Future fire-driven landscape changes along a southwestern US elevation gradient
<p>Over the 21st century, the combined effects of increased fire activity and climate changes are expected to altered forest composition and structure in many ecosystems by changing post-fire successional trajectories and recovery. The southwestern US mountains encompass varied vegetation types and species according to elevation which do not respond the same to changing climate and fire regime. Moreover, fire exclusion applied during the early 20<sup>th</sup> century has altered forest structure and fuel loads compared to their natural states (i.e. without fire suppression). Consequently, uncertainties persist about future vegetation shifts along the elevation gradient.</p> <p>In this study, we simulated future vegetation dynamics along an elevation gradient in the southwestern US comprising pinyon-juniper woodlands, ponderosa pine forests and mixed conifer forests for the period 2000-2099, to quantify the effects of future climate conditions and projected wildfires on species productivity and distribution.</p> <p>While we expected to find larger changes at low elevation due to warmer and drier conditions, the largest changes occurred at high elevation in mixed-conifer forests and were caused by wildfire. The largest increase in high-severity and large fires were recorded in this vegetation type, leading to high mortality of the dominant species, <i>Picea engelmannii</i> and <i>Abies lasiocarpa</i>, which are not adapted to fire. The loss of these two species reduced biomass productivity at high elevation. In ponderosa pine forests and pinyon-juniper woodlands, fewer vegetation changes occurred due to higher abundance of well-adapted species to fire and the lower fuel loads mitigating projected fire activity, respectively.</p> <p>Thus, future research should prioritize understanding of the processes involved in future vegetation shifts in mixed-conifer forests in order to mitigate the risk of loss of diversity specific to high-elevation forests and the decrease in biomass productivity, and thus carbon storage capacity, of these ecosystems due to wildfires.</p>
Avian community mist net survey data from Luba/Ureca road elevational gradient, Bioko Island, Equatorial Guinea
<p>Understanding interactive effects between anthropogenic disturbance and abiotic factors on species turnover can help identify and prioritize conservation of potentially vulnerable tropical bird communities. We investigated potential factors influencing avian understory community composition along a recently constructed road across three elevations (300, 800 and 1200 m), each with two sampling sites (road edge vs interior forest), over a four-year period on Bioko Island, Equatorial Guinea. Obligate ant following species were the most abundant guild sampled accounting for 23% of total species diversity within the data set, which increased to 40% when including occasional ant following species. Habitat associated with elevation was the most significant factor influencing the composition of avian communities at all three elevations. Additionally, we identified species with clear statistical associations for each elevation: the yellow-lored bristlebill (Bleda notatus), olive sunbird (Cyanomitra obscura), and white-tailed warbler (Poliolias lopezi). We found evidence for significant community differences between the disturbance edge and interior forest transects at 300 m only. Likewise, understory insectivores were found at higher numbers within the interior forest transect at this elevation. Based on the data presented here, we suggest low elevation avian understory insectivores should be considered focal species for future assessment studies in this area. Furthermore, since many traditional protected areas focus on upland habitat containing high species endemism, our findings emphasize the importance of equally conserving lowland elevations as they may house commonly overlooked yet important and diverse segments of the bird community. </p>
Data from: Differential proteomic responses of selectively bred and wild Sydney rock oyster populations exposed to elevated CO2
Previous work suggests that larvae from Sydney rock oysters that have been selectively bred for fast growth and disease resistance are more resilient to the impacts of ocean acidification than nonselected, wild-type oysters. In this study, we used proteomics to investigate the molecular differences between oyster populations in adult Sydney rock oysters and to identify whether these form the basis for observations seen in larvae. Adult oysters from a selective breeding line (B2) and nonselected wild types (WT) were exposed for 4 weeks to elevated pCO2 (856 μatm) before their proteomes were compared to those of oysters held under ambient conditions (375 μatm pCO2). Exposure to elevated pCO2 resulted in substantial changes in the proteomes of oysters from both the selectively bred and wild-type populations. When biological functions were assigned, these differential proteins fell into five broad, potentially interrelated categories of subcellular functions, in both oyster populations. These functional categories were energy production, cellular stress responses, the cytoskeleton, protein synthesis and cell signalling. In the wild-type population, proteins were predominantly upregulated. However, unexpectedly, these cellular systems were downregulated in the selectively bred oyster population, indicating cellular dysfunction. We argue that this reflects a trade-off, whereby an adaptive capacity for enhanced mitochondrial energy production in the selectively bred population may help to protect larvae from the effects of elevated CO2, whilst being deleterious to adult oysters.
Vertical niche and elevation range size in tropical ants: implications for climate resilience
<p><strong>Aim</strong>: We propose that forest trees create a vertical dimension for ecological niche variation that generates different regimes of climatic exposure, which in turn drives species elevation distributions. We test this hypothesis by statistically modelling the vertical and elevation distributions and microclimate exposure of rainforest ants. </p> <p><strong>Location</strong>: Wet Tropics Bioregion, Australia</p> <p><strong>Methods</strong>: We conducted 60 ground-to-canopy surveys to determine the vertical (tree) and elevation distributions, and microclimate exposure of ants (101 species) at 15 sites along four mountain ranges. We statistically modelled elevation range size as a function of ant species' vertical niche breadth and exposure to temperature variance for 55 species found at two or more trees. </p> <p><strong>Results</strong>: We found a positive association between vertical niche and elevation range of ant species: for every 3 m increase in vertical niche breadth our models predict a ~150% increase in mean elevation range size. Temperature variance increased with vertical height along the arboreal gradient and ant species exposure to temperature variance explained some of the variation in elevation range size.</p> <p><strong>Main Conclusions</strong>: We demonstrate that arboreal ants have broader elevation ranges than ground-dwelling ants and are likely to have increased resilience to climatic variance. The capacity of species to expand their niche by climbing trees could influence their ability to persist over broader elevation ranges. We propose that wherever vertical layering exists - from oceans to forest ecosystems - vertical niche breadth is a potential mechanism driving macrogeographic distribution patterns and resilience to climate change.</p>
Arboreality drives heat tolerance while elevation drives cold tolerance in tropical rainforest ants
<p>Determining how species thermal limits correlate with climate is important for understanding biogeographic patterns and assessing vulnerability to climate change. Such analyses need to consider thermal gradients at multiple spatial scales. Here we relate thermal traits of rainforest ants to microclimate conditions from ground to canopy (microgeographic scale) along an elevation gradient (mesogeographic scale) and calculate warming tolerance in the Australian Wet Tropics Bioregion. We test the thermal adaptation and thermal niche asymmetry hypotheses to explain interspecific patterns of thermal tolerance at these two spatial scales. We tested CT<sub>min</sub>, CT<sub>max</sub>, and calculated CT<sub>range</sub> using ramping assays for 74 colonies of 40 ant species collected from terrestrial and arboreal habitats at lowland and upland elevation sites and recorded microclimatic conditions for one year. Within sites, arboreal ants were exposed to hotter microclimates and on average had a 4.2°C (95% CI: 2.7 – 5.6°C) higher CT<sub>max</sub>, and 5.3°C (95% CI: 3.5 – 7°C) broader CT<sub>range</sub> than ground-dwelling ants. This pattern was consistent across the elevation gradient, whether it be the hotter lowlands or the cooler uplands. Across elevation, upland ants had significantly lower CT<sub>min </sub>than lowland ants, whereas the change in CT<sub>max</sub> was less pronounced, and CT<sub>range</sub> did not change over elevation. Differential exposure to microclimates, due to localised niche preferences, drives divergence in CT<sub>max</sub> while environmental temperatures along the elevation gradient drive divergence in CT<sub>min</sub>. Our results suggest that both processes of thermal adaptation and thermal niche asymmetry are at play depending on the spatial scale of observation, and we discuss potential mechanisms underlying these patterns. Despite the broad thermal tolerance range of arboreal rainforest ants, lowland arboreal ants had the lowest warming tolerance and may be most vulnerable to climate change.</p>
Data from: Temperature and vegetation complexity structure mixed-species flocks along a gradient of elevation in the tropical Andes
<p>Mixed-species flocks constitute community modules that can help test mechanisms driving changes to community composition across environmental gradients. Here, we examined elevational patterns of flock diversity (species richness, taxonomic diversity, species and guild composition) and asked if these patterns were reflections of the full bird community at a given elevation (open-membership hypothesis), or if they were instead structured by environmental variables. We surveyed both the overall avian community and mixed-species flocks across an undisturbed elevational gradient (~1350 – 3550 m) in the Bolivian Andes. We then tested for the role of temperature (a surrogate for abiotic stress), resource diversity (arthropods, fruits) and foraging niche diversity (vegetation vertical complexity) in structuring these patterns. Patterns for the overall and flocking communities were similar, supporting our open-membership hypothesis that Andean flocks represent dynamic, unstructured aggregations. Membership openness and the resulting flock composition, however, also varied with elevation in response to temperature and vegetation complexity. We found a mid-elevation peak in flock species richness, size, and Shannon's diversity at ~2300 m. The transition of flocking behavior towards a more open-membership system at this elevation may explain a similar peak in the proportion of insectivores joining flocks. At high elevations, increasing abiotic stress and decreasing fruit diversity led more generalist, gregarious tanagers (Thraupidae) to join flocks, resulting in larger yet more even flocks alongside a loss of vegetation structure. At lower elevations, flock species richness increased with greater vegetation complexity, but a greater diversity of foraging niches resulted in flocks that were more segregated into separate canopy and understory sub-types. This segregation likely results from increased costs of interspecific competition and activity matching (i.e., constraints on movement and foraging rate) for insectivores. Mid-elevation flocks (~2300 m) seemed, therefore, to benefit from both the open-membership composition of high-elevation flocks and the high vegetation complexity of mid- and low-elevation forests.</p>
Transcriptional differentiation of UV-B protectant genes in maize landraces spanning an elevational gradient in Chiapas, Mexico
Globally, farmers cultivate and maintain crop landraces (i.e., traditional varieties). Landraces contain unique diversity shaped in part by natural and human-mediated selection and are an indispensable resource to farmers. Since environmental conditions change with elevation, crop landraces grown along elevational gradients have provided ideal locations to explore patterns of local adaptation. To further probe traits underlying this differentiation, transcriptome signatures can help provide a foundation for understanding the ways in which functional genetic diversity may be shaped by environment. In this study, we returned to an elevational gradient in Chiapas, Mexico, to assess transcriptional differentiation of genes underlying UV-B protection in locally adapted maize landraces from multiple elevations. We collected and planted landraces from three elevational zones (lowland, approximately 600 m; midland, approximately 1,550 m; highland approximately 2,100 m) in a common garden at 1,531 m. Using RNA-seq data derived from leaf tissue, we performed differential expression analysis between maize from these distinct elevations. Highland and lowland landraces displayed differential expression in phenylpropanoid and flavonoid biosynthesis genes involved in the production of UV-B protectants and did so at a rate greater than expected based on observed background transcriptional differentiation across the genome. These findings provide evidence for the differentiation of suites of genes involved in complex ecologically relevant pathways. Thus, while neutral evolutionary processes may have played a role in the observed patterns of differentiation, UV-B may have also acted as a selective pressure to differentiate maize landraces in the region. Studies of the distribution of functional crop genetic diversity across variable landscapes can aid us in understanding the response of diversity to abiotic/biotic change and, ultimately, may facilitate its conservation and utilization.
Gridded airborne laserscanner (ALS) elevation data (L4) for three flights during MOSAiC (prerelease)
<p>An integrated sensor platform including an inertial navigation system (INS) and a commercial (Riegl VQ580) airborne laser scanner (ALS) among other sensor was mounted in the cargo compartment in one of the Polarstern helicopters (D-HARK) during MOSAiC. This sensor combinations allows for a precise mapping of the snow and sea-ice surface around Polarstern at submeter-scale resolution. Information from the ALS data includes the elevation of the snow or ice surface and surface reflectivity at the near-infrared wavelength. From the more than 60 flights acquired between October 2019 and September 2020 we prerelease with this gridded data-set three flights for quality-control and test purposes by potential end users. The geographical coordinates of the data have been corrected for the drift of the sea-ice cover during each survey flight and the elevation bias has been corrected based on overlapping flight transects.</p> <p> </p> <p><em>Flight dates (Device Operation):</em></p> <ul> <li>Oct. 2, 2019 (PS122/1_2-57)</li> <li>Apr 8, 2020 (PS122/3_35-49)</li> <li>July 22, 2020 (PS122/4_48-69)</li> </ul> <p><em>Variables (file format: netCDF version 4 and geotiffs):</em></p> <ul> <li><strong>Elevation:</strong> elevation of the sea ice or snow surface above WGS84 ellipsoid</li> <li><strong>Reflectance:</strong> range corrected target echo amplitude</li> <li><strong>Echo Width:</strong> width of the target echo return (full width at half maximum)</li> </ul> <p><em>Project</em></p> <p>ALS and INS data was collected as part of the international Multidisciplinary drifting Observatory for the Study of the Arctic Climate (MOSAiC) with the tag MOSAiC20192020 and the Project_ID: AWI_PS122_00. Data processing and analysis is funded by the BMBF IceSense (03F0866A) project. </p>
Speciation along the elevation gradient: divergence of Roscoea species within the south slope of the Himalayas
<p>The Himalayas with dramatic elevation gradient is one of the global biodiversity hotspots. Although origin of biodiversity of the Himalayas is of great concern, the<i> </i>speciation process within the Himalayas is poorly known. <i>Roscoea</i> within the Himalayas serve as a good model system to test the speciation process along an elevation gradient. 32375 unlinked SNPs were used to reconstruct phylogenetic relationships and introgression analyses in <i>D</i>-statistics and <i>Fastsimicoal</i>2. Species distribution modeling (SDM) was used to simulate habitat shift of <i>Roscoea</i> species during climate changes. Phylogeny suggested that the speciation order, except <i>R. capitata</i>, was from highland to lowland. <i>D</i>-statistics analyses suggested significant bidirectional ancient introgression between elevation-neighboring clades but no introgression between<i> R. capitata</i> and othern clades and no introgression among extant species. <i>Fastsimicoal</i>2 suggested interspecific introgressions were asymmetric. SDM predicted that habitats of <i>Roscoea</i> shifted to low elevation during cooling age. These results suggested that the sudden uplift of the Himalayas likely promoted speciation by vicariance, and climate cooling drove species divergence towards lower elevation. This study provides explanations for the origin of biodiversity within the Himalayas, and an insight to understand speciation along elevation in the mountainous regions.</p>
Figure 4 in Macroinvertebrate richness is lower in high-elevation lakes vs nearby streams: evidence from Grand Teton National Park, Wyoming
Figure 4. Two-dimensional non-metric multidimensional scaling (NMDS) plots comparing mountain lakes and stream invertebrate assemblages in Grand Teton National Park, Wyoming. (a) NMDS comparison of the six lake sites included in this study and 15 sites along five nearby streams included in Tronstadet al. (2016). (b) NMDS comparison of the same six lakes and only the five highest elevation stream sites from Tronstadet al. (2016). Circles indicate individual taxa. Ordinations were calculated using Bray-Curtis dissimilarities.
Figure 3 in Macroinvertebrate richness is lower in high-elevation lakes vs nearby streams: evidence from Grand Teton National Park, Wyoming
Figure 3. Principal component (PC) analyses comparing (a) six lakes in Grand Teton National Park for 11 environmental variables (excluding date; Table 1) and (b) for the same six lakes and the five highest elevation stream sites included in Tronstadet al. (2016). Stream sites are in bold and italics (Death Creek, DCU; Granite Creek, GCU; Cascade Creek, CCU; Owl Creek, OCU; and Moose Creek, MCU). Environmental variables used for the stream vs lake comparison are included in Supplementary Table 2. Abbreviations: ORP, oxidation-reduction potential; SPC, specific conductivity.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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