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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286983. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptomics of human carotid artery plaques V2
GEO Series GSE294291. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics reveals lineage trajectory of the retinal ganglion cells in wild-type and Atoh7-null retinas
GEO Series GSE149040. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq analysis reveals compartment-specific heterogeneity and plasticity of microglia
GEO Series GSE155081. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Molecular profiling of single circulating tumor cells with diagnostic intention
GEO Series GSE58192. Homo sapiens. 52 samples. Type: Genome variation profiling by genome tiling array.
Gene expression of Cancer-associated fibroblasts from orthotopically engrafted murine colon tumors on the single cell level (Sort-Seq)
GEO Series GSE253639. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Integrative single cell and spatial transcriptomic analysis reveal reciprocal microglia-plasma cell crosstalk in the mouse brain during chronic Trypanosoma brucei infection
GEO Series GSE200642. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single cell resolution using RNA sequencing [bulk RNA-seq]
GEO Series GSE100912. Danio rerio. 12 samples. Type: Expression profiling by high throughput sequencing.
Identifying non-genetic determinants of malignant clonal fitness at single cell resolution [chemo scRNAseq]
GEO Series GSE186305. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell gene expression of Mycobacterium tuberculosis (Mtb) specific T-cells
GEO Series GSE211323. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Generation of Blastocyst-like Structures from Extended Pluripotent Stem Cells (single-cell RNA-Seq)
GEO Series GSE135701. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis of protein epitopes and chromatin accessibility using PHAGE-ATAC [CD8_Hashing]
GEO Series GSE157478. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell multi-modal profiling of proteins and chromatin accessibility using PHAGE-ATAC [Intracellular_GFP]
GEO Series GSE172921. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Molecular, Cellular, and Developmental Organization of the Mouse Vomeronasal organ at Single Cell Resolution
GEO Series GSE252365. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Tracing the evolution of single-cell 3D genomes in Kras-driven cancers [snRNA-seq]
GEO Series GSE295452. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Endothelial plasticity in atrial fibrosis by integrating single-cell sequencing and genetic lineage tracing
GEO Series GSE198204. Homo sapiens; Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of zebrafish hematopoietic stem cells and endothelial cells
GEO Series GSE186565. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.
single cell ATAC-seq
GEO Series GSE193035. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification
GEO Series GSE118614. Mus musculus. 882 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals prominent expression of IL-14, IL-18 and IL-32 in psoriasis
GEO Series GSE221648. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.