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FIGURE 5 in A review of records of the Trimeresurus albolabris Gray, 1842 group from the Indian subcontinent: expanded description and range extension of Trimeresurus salazar, redescription of Trimeresurus septentrionalis and rediscovery of historical specimens of Trimeresurus davidi (Reptilia: Viperidae)
FIGURE 5. Trimeresurus salazar live adult males showing intraspecific variation in the intensity of red lateral striping—top: individual with bold and thick red stripe from Byrnihat, Meghalaya (Photos: Ashok K. Mallik); above: individual with obscure and thin red stripe from Kanha, Madhya Pradesh. (Photo: Yajuvendra Upadhyaya).
FIGURE 3 in A review of records of the Trimeresurus albolabris Gray, 1842 group from the Indian subcontinent: expanded description and range extension of Trimeresurus salazar, redescription of Trimeresurus septentrionalis and rediscovery of historical specimens of Trimeresurus davidi (Reptilia: Viperidae)
FIGURE 3. Trimeresurus salazar live uncollected subadult males from Jashpur, India. Photos: Vivek Sharma
FIGURE 1 in A review of records of the Trimeresurus albolabris Gray, 1842 group from the Indian subcontinent: expanded description and range extension of Trimeresurus salazar, redescription of Trimeresurus septentrionalis and rediscovery of historical specimens of Trimeresurus davidi (Reptilia: Viperidae)
FIGURE 1. Map of the Indian subcontinent showing newly recorded / identified distribution records of (i). Trimeresurus salazar (black; field records: squares, specimen records: dots); (ii). T. septentrionalis (white); type localities with a dot in the middle (iii). T. davidi (encircled—corrected locality / X—incorrect locality)
FIGURE 4 in A review of records of the Trimeresurus albolabris Gray, 1842 group from the Indian subcontinent: expanded description and range extension of Trimeresurus salazar, redescription of Trimeresurus septentrionalis and rediscovery of historical specimens of Trimeresurus davidi (Reptilia: Viperidae)
FIGURE 4. Trimeresurus salazar live uncollected adult females from Jashpur and Bilaspur (Kanan Pendari Zoo) India. Photos: Vivek Sharma
Figure 1. Metriorhynchus brevirostris holotype MHNG V-2232. A in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 1. Metriorhynchus brevirostris holotype MHNG V-2232. A, dorsal view; B, palatal view. See text for anatomical abbreviations.
Figure 5 in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 5. Phylogram of the Bayesian analysis, focusing on Metriorhynchoidea. Nodes with strong support (PP ≥ 0.95) are in red, nodes with low support (PP between ≥ 0.90 and <0.95) are in blue and nodes with poor support (PP <0.90) are unlabelled. Node numbers represent: (1) Metriorhynchidae, (2) Metriorhynchinae, (3) Rhacheosaurini, (4) Geosaurinae and (5) Geosaurini.
Figure 8 in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 8. Comparative plate of metriorhynchid premaxilla–maxilla contact in palatal view. A, Metriorhynchus brevirostris, holotype MHNG V-2232; B, Thalattosuchus superciliosus, referred specimen PETMG R17; C, 'Metriorhynchus' brachyrhynchus, referred specimen NHMUK PV R 3804 (holotype of 'Metriorhynchus' cultridens); D, Tyrannoneustes lythrodectikos, referred specimen PETMG R176; E, 'Swiss rostrum', NMO 26589; F, 'English rostrum', CAMSM J18212; G, 'Swiss rhacheosaurin', NMBE 5018135; H, Cricosaurus bambergensis, holotype NKMB-P-Watt14/274. See text for anatomical abbreviations. Scale bar = 2 cm.
Figure 4 in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 4. Strict consensus topologies of Metriorhynchinae found in the parsimony analyses. A, unweighted topology; B, strongly down-weighted topology (k = 1, k = 3 and k = 7); C, moderately down-weighted topology (k = 10); D, moderate-weak down-weighting topology (k = 15 and k = 50); E, unique topology (k = 20 phenotype dataset). Rhacheosaurini is represented by a large circle.
Figure 3. Metriorhynchus brevirostris holotype MHNG V-2232. A in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 3. Metriorhynchus brevirostris holotype MHNG V-2232. A, anterior view; B, posterior view. See text for anatomical abbreviations.
Figure 7 in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 7. Comparative plate of metriorhynchid anterior cranial rostra. A, B, Metriorhynchus brevirostris, holotype MHNG V-2232 in dorsal and palatal views, respectively; C, D, Thalattosuchus superciliosus, referred specimen PETMG R17 in dorsal and palatal views, respectively; E, F, 'Metriorhynchus' brachyrhynchus, referred specimen NHMUK PV R 3804 (holotype of 'Metriorhynchus' cultridens) in dorsal and palatal views, respectively; G, H, 'Metriorhynchus' palpebrosus, holotype OUMNH J.29823 in dorsal and palatal views, respectively; I, J, Tyrannoneustes lythrodectikos, referred specimen PETMG R176 in dorsal and palatal views, respectively; K, L, Plesiosuchus manselii, holotype NHMUK PV OR 40103 in dorsal and palatal views, respectively. See text for anatomical abbreviations. Scale bar = 5 cm.
Figure 2. Metriorhynchus brevirostris holotype MHNG V-2232. A in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 2. Metriorhynchus brevirostris holotype MHNG V-2232. A, left lateral view; B, right lateral view. See text for anatomical abbreviations.
Figure 6. Thalattosuchus superciliosus lectotype MNHN.F RJN 256. A in Cutting the Gordian knot: a historical and taxonomic revision of the Jurassic crocodylomorph Metriorhynchus
Figure 6. Thalattosuchus superciliosus lectotype MNHN.F RJN 256. A, dorsal view; B, palatal view; C, left lateral view. Scale bar = 10 cm.
Raw data and alignments for: Application of palaeogenetic techniques to historic mollusc shells reveals phylogeographic structure in a New Zealand abalone
<p>Natural history collections worldwide contain a plethora of mollusc shells. Recent studies have detailed the sequencing of DNA extracted from shells up to thousands of years old and from various taphonomic and preservational contexts. However, previous approaches have largely addressed methodological rather than evolutionary research questions. Here we report the generation of DNA sequence data from mollusc shells using such techniques, applied to <em>Haliotis virginea</em> Gmelin, 1791, a New Zealand abalone, in which morphological variation has led to the recognition of several forms and subspecies. We successfully recovered near-complete mitogenomes from 22 specimens including 12 dry-preserved shells up to 60 years old. We used a combination of palaeogenetic techniques that have not previously been applied to shell, including DNA extraction optimized for ultra-short fragments and hybridization-capture of single-stranded DNA libraries. Phylogenetic analyses revealed three major, well-supported clades comprising samples from: 1) the Three Kings Islands; 2) the Auckland, Chatham and Antipodes Islands; and 3) mainland New Zealand and Campbell Island. This phylogeographic structure does not correspond to the currently recognized forms. Critically, our non-reliance on freshly collected or ethanol-preserved samples enabled inclusion of topotypes of all recognized subspecies as well as additional difficult-to-sample populations. Broader application of these comparatively cost-effective and reliable methods to modern, historical, archaeological and palaeontological shell samples has the potential to revolutionize invertebrate genetic research.</p>
FIGURES 1–19 in A new Fragilaria Lyngbye species (Fragilariaceae, Bacillariophyta) from a historic Grunow sample from the Attersee, Austria
FIGURES 1–19. Light micrographs of Fragilaria crocodylus Van de Vijver & C.E.Wetzel sp. nov. LM images taken from the holotype population (BR-4736, Grunow sample 2646, Attersee, Austria). 1. Frustule in girdle view. 2–19. LM views of the population arranged in decreasing length. Scale bar = 10 µm.
FIGURES 20–25 in A new Fragilaria Lyngbye species (Fragilariaceae, Bacillariophyta) from a historic Grunow sample from the Attersee, Austria
FIGURES 20–25. Scanning electron micrographs of Fragilaria crocodylus Van de Vijver & C.E.Wetzel sp. nov. SEM images taken from the holotype population (BR-4736, Grunow sample 2646, Attersee, Austria). 20. SEM external view of an entire valve. Note the continuous series of marginal spines running from apex to apex and the lack of rimoportula at one apex. 21. SEM girdle view of two valves connected to each other via the short, conical spines. 22. SEM side view of the valve apex showing mantle plaques, the apical pore field, five protruding conical spines at the apex and the depressed rimoportula. 23. SEM external view of a valve apex showing the rimoportula, the conical spines on their pit-like depressions and the uniseriate striae with the combination of rounded and slit-like areolae. 24. SEM external detail of the central area. Note the slit-like areolae terminating the striae at the sternum. 25. SEM internal detail of a valve apex with the large rimoportula. Scale bars = 10 μm (Figs 20–21), 1 μm (Figs 22–25).
Women in Limnology: from a historical perspective to a present-day evaluation
<p>Data presented in the manuscript "Women in Limnology: from a historical perspective to a present-day evaluation", authored by the Gender and Science Group of the Iberian Association of Limnology and published in the journal <em>WIREs Water</em> in 2022. </p> <p>There is two datasets:</p> <p><strong>Annex1:</strong> Table containing the name, bibliography and relevant contributions of 73 female limnologists. The selected limnologists are from different countries, periods, and disciplines; and were chosen because of their relevance in the field.</p> <p><strong>Annex3:</strong> Representation of female limnologists as (1) presidents of academic sociaties (year 2021), (2) plenary speakers in conferences, (3) senor and junior awardees and (4) members of journal editorial boards. bbreviations for societies and conferences are: AFL, Association Françoise de Limnologie; AIL, Asociación Ibérica de Limnología; ASLO, Association for the Sciences of Limnology and Oceanography; DGL, German Limnological Society; EFFS, European Federation for Freshwater Sciences; PTH, Polish Hydrobiological Society; SEFS, Symposium for European freshwater Sciences; SFS, Society for Freshwater Sciences; SGHL, Swiss Hydrological & Limnology Society; SIL, International Society of Limnology; SIL‐Austria, Austrian Limnological Association; and TLS, Turkish Limnological Society</p>
Historic daily air temperature and precipitation series data for Wudaoliang and Tuotuohe sations (2009-2021)
<p>This dataset contains the historic daily air temperature and precipitation for Wudaoliang and Tuotuohe sations in Qinghai Province from 2009 to 2021</p>
Fig. 2 in Historical Biogeography of Holarctic Cymbiodyta Water Scavenger Beetles in the Times of Cenozoic Land Bridge Dispersal Routes
Fig. 2. Bayesian median divergence time estimates of Cymbiodyta. Maximum clade credibility chronogram resulting from the best BEAST analysis using secondary calibrations with outgroups pruned.The credibility intervals are indicated with gray horizontal boxes.The best ancestral range estimation scheme from the DEC analyses is presented with the most likely ancestral range for each node along the phylogeny of the genus. Color codes follow the inserted caption.
Fig. 1 in Historical Biogeography of Holarctic Cymbiodyta Water Scavenger Beetles in the Times of Cenozoic Land Bridge Dispersal Routes
Fig. 1. Molecular phylogeny of the genus Cymbiodyta and phylogenetically closely related genera. MrBayes topology inferred based on the concatenated data set of five gene fragments. Nodal support for each node resulting from the MrBayes and IQ-TREE analyses is given following the inserted caption. A picture of Cymbiodyta marginella (Fabricius, 1792) is presented (Credit: Udo Shmidt).
Fig. 1 in Is Phylogeographic Congruence Predicted by Historical Habitat Stability, or Ecological Co-associations?
Fig. 1. Ecological niche models (ENMs) estimated for each of the five species from present-day to Last Glacial Maximum, and climatic stability based on the ENM time series. Color coding uses "warm" colors to indicate areas of highest probability of occurrence, or highest climatic stability. Species names are abbreviated as follows: C.p. (Cryptocercus punctulatus), R.f. (Reticulitermes flavipes), O.d. (Odontotaenius disjunctus), S.s. (Scolopocryptops sexspinosus), and N.a. (Narceus americanus).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.