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1,723
datasets available to search
ShareScore release 0.9.0
Dataset results
1,723 results for “Reactivation”
Benzotriazoles reactivate latent HIV-1 through inactivation of STAT5 SUMOylation
GEO Series GSE84203. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition
GEO Series GSE83293. Mus musculus. 77 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Single cell RNA-seq reveals expansion of IGRP-reactive CD4+ T cells in recent onset type I diabetes
GEO Series GSE96569. Homo sapiens. 449 samples. Type: Expression profiling by high throughput sequencing.
Influenza peptide reactivity within a cohort of age-stratified individuals pre and post vaccination with the 2008/2009 trivalent influenza vaccine
GEO Series GSE43446. H3N2 subtype; Homo sapiens; H1N1 subtype; Influenza B virus. 152 samples. Type: Other.
Escalating-dose peptide immunotherapy induces progressive immunoregulatory changes in self-reactive T cells
GEO Series GSE46036. Mus musculus. 7 samples. Type: Expression profiling by array.
Transcriptome of myelin oligodendrocyte glycoprotein (MOG)-reactive CD4 T cells and control CD4 T cells from draining lymp nodes and spleens of mice during experimental autoimmune encephalomyelitis (E
GEO Series GSE205600. Mus musculus. 15 samples. Type: Expression profiling by array.
Self-reactivity of CD8 T-cell clones determines their differentiation status rather than their responsiveness in infections
GEO Series GSE208795. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Landscape of Monoallelic DNA Accessibility and Gene Regulatory Networks during Reprogramming to Naive Pluripotency and X Chromosome Reactivation
GEO Series GSE153847. Mus musculus. 727 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A comparative analysis of reactive Müller glia gene expression after light damage and microRNA-depleted Müller glia – focus on microRNAs [NanoString]
GEO Series GSE162993. Mus musculus. 3 samples. Type: Non-coding RNA profiling by array.
A phenotypic screening platform for identifying chemical modulators of astrocyte reactivity [CUT&RUN]
GEO Series GSE231598. Mus musculus. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transformation of quiescent adult oligodendrocyte precursor cells into malignant glioma through a multi-step reactivation process
GEO Series GSE61282. Mus musculus. 14 samples. Type: Expression profiling by array.
K6-Linked Ubiquitylation Signals Reactive Aldehyde-Induced RNA-Protein Crosslink Resolution
GEO Series GSE240625. Homo sapiens. 2 samples. Type: Other.
Reactive oxygen species-inducible ECF σ factor involved in singlet-oxygen responsiveness of Bradyrhizobium japonicum
GEO Series GSE39165. Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum. 21 samples. Type: Expression profiling by array.
Effect of wtp53-reactivating drug RITA on HCT116 cells
GEO Series GSE11578. Homo sapiens. 12 samples. Type: Expression profiling by array.
Zeb2os Hinders Cardiac Healing by Suppressing ZEB2 Reactivation and Cardiomyocyte Dedifferentiation
GEO Series GSE311091. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Induction of broadly reactive influenza antibodies increases susceptibility to autoimmunity
GEO Series GSE196366. Mus musculus. 0 samples. Type: Other.
RNA-Seq transcriptome analysis of reactive oxygen species gene network in Mizuna plants grown in long-term space flight
Space environment is suspected to generate reactive oxygen species (ROS) and induce oxidative stress in plants however little is known about the gene expression of ROS gene network in plants grown in long-term space flight. RNA-Seq was used to define the large-scale gene expression profiles of Mizuna harvested after 27 days cultivation in the international space station to understand the molecular response and adaptation to space environment.Results: Total reads of transcripts from the Mizuna grown in the international space station as well as on the ground by RNA-Seq using next generation sequencing technology showed 8,258 and 14,170 transcripts up- and down-regulated in the space-grown Mizuna respectively when compared with those from the ground-grown Mizuna. A total of 20 in 32 ROS oxidative marker genes were up-regulated including high expression of 4 hallmarks and preferentially expressed gene associated with ROS-scavenging genes was thioredoxin glutaredoxin and alternative oxidase genes. In the transcription factors of ROS gene network MEKK1-MKK4-MPK3 OXI1-MKK4-MPK3 and OXI1-MPK3 of MAP cascades induction of WRKY22 by MEKK1-MKK4-MPK3 cascade induction of WRKY25 and repression of ZAT7 by Zat12 were suggested. RbohD and RbohF genes were up-regulated preferentially in NADPH oxidase genes which produce ROS.Conclusions: Our large-scale transcriptome analysis demonstrated that the space environment induced oxidative stress and ROS gene network was activated in the space-grown Mizuna some of which were common genes up-regulated by abiotic and biotic stress and were preferentially up-regulated genes by the space environment even though Mizuna grew in the space as well as on the ground showing that plants could acclimate to the space environment by reprograming the expression of ROS gene network.
RNA-Seq transcriptome analysis of reactive oxygen species gene network in Mizuna plants grown in long-term space flight
Space environment is suspected to generate reactive oxygen species (ROS) and induce oxidative stress in plants however little is known about the gene expression of ROS gene network in plants grown in long-term space flight. RNA-Seq was used to define the large-scale gene expression profiles of Mizuna harvested after 27 days cultivation in the international space station to understand the molecular response and adaptation to space environment.Results: Total reads of transcripts from the Mizuna grown in the international space station as well as on the ground by RNA-Seq using next generation sequencing technology showed 8,258 and 14,170 transcripts up- and down-regulated in the space-grown Mizuna respectively when compared with those from the ground-grown Mizuna. A total of 20 in 32 ROS oxidative marker genes were up-regulated including high expression of 4 hallmarks and preferentially expressed gene associated with ROS-scavenging genes was thioredoxin glutaredoxin and alternative oxidase genes. In the transcription factors of ROS gene network MEKK1-MKK4-MPK3 OXI1-MKK4-MPK3 and OXI1-MPK3 of MAP cascades induction of WRKY22 by MEKK1-MKK4-MPK3 cascade induction of WRKY25 and repression of ZAT7 by Zat12 were suggested. RbohD and RbohF genes were up-regulated preferentially in NADPH oxidase genes which produce ROS.Conclusions: Our large-scale transcriptome analysis demonstrated that the space environment induced oxidative stress and ROS gene network was activated in the space-grown Mizuna some of which were common genes up-regulated by abiotic and biotic stress and were preferentially up-regulated genes by the space environment even though Mizuna grew in the space as well as on the ground showing that plants could acclimate to the space environment by reprograming the expression of ROS gene network.
Detecting Tumor Specific Antigen-Reactive T cells from Tumor Infiltrating Lymphocytes via Interaction Dependent Fucosyl-biotinylation [RNA-seq]
GEO Series GSE145596. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Enhancer reactivation mediates adaptive resistance to FGFR inhibitors in triple-negative breast cancer [CRISPR]
GEO Series GSE168022. Homo sapiens. 9 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.