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dryad36/100

Data from: Quantitative proteomics reveals rapid divergence in the postmating response of female reproductive tracts among sibling species

<p><span><span><span><span><span><span><span><span><span><span><span>Fertility depends, in part, on interactions between male and female reproductive proteins inside the female reproductive tract (FRT) that mediate postmating changes in female behavior, morphology, and physiology. Coevolution between interacting proteins within species may drive reproductive incompatibilities between species, yet the mechanisms underlying postmating-prezygotic isolating barriers remain poorly resolved. Here, we used quantitative proteomics in sibling <i>Drosophila</i> species to investigate the molecular composition of the FRT environment and its role in mediating species-specific postmating responses. We found that (1) FRT proteomes in <i>D. simulans</i> and<i> D. mauritiana</i> virgin females express unique combinations of secreted proteins and are enriched for distinct functional categories, (2) mating induces substantial changes to the FRT proteome in <i>D. mauritiana</i> but not in <i>D. simulans</i>, and (3) the <i>D. simulans </i>FRT proteome exhibits limited postmating changes irrespective of whether females mate with conspecific or heterospecific males, suggesting an active female role in mediating reproductive interactions. Comparisons with similar data in the closely related outgroup species <i>D. melanogaster </i>suggest that divergence is concentrated on the <i>D. simulans </i>lineage. Our study suggests that divergence in the FRT extracellular environment and postmating response contribute to previously described patterns of postmating-prezygotic isolation and the maintenance of species boundaries.</span></span></span></span></span></span></span></span></span></span></span></p>

opencc-zeroJun 2020View details →
dryad36/100

Data from: Does local adaptation along a latitudinal cline shape plastic responses to combined thermal and nutritional stress?

<p>Thermal and nutritional stress are commonly experienced by animals. This will become increasingly so with climate change. Whether populations can plastically respond to such changes will determine their survival. Plasticity can vary among populations depending on the extent of environmental heterogeneity. However, theory conflicts as to whether environmental heterogeneity should increase or decrease plasticity. Using three locally-adapted populations of Drosophila melanogaster sampled from a latitudinal gradient, we investigated whether plastic responses to combinations of nutrition and temperature increase or decrease with latitude for four traits: egg-adult viability, egg-adult development time, and two body size traits. Employing nutritional geometry, we reared larvae on 25 diets varying in protein and carbohydrate content at two temperatures: 18ºC and 25ºC. Plasticity varied among traits and across the three populations. Viability was highly canalized in all three populations. The tropical population showed the least plasticity for development time, the sub-tropical showed the highest plasticity for wing area, and the temperate population showed the highest plasticity for femur length. We found no evidence of latitudinal plasticity gradients in either direction. Our data highlight that differences in thermal variation and resource predictability experienced by populations along a latitudinal cline are not sufficient to predict their plasticity. </p>

opencc-zeroJul 2020View details →
dryad36/100

Data from: Multi-scalar drivers of biodiversity: local management mediates wild bee community response to regional urbanization

It is critical to understand the specific drivers of biodiversity across multiple spatial scales, especially within rapidly urbanizing areas, given the distinct management recommendations that may result at each scale. However, drivers of biodiversity patterns and interactions between drivers are often only measured and modeled at a single scale. In this study, we assessed bee community composition at three time periods in 20 grassland and 20 agriculture sites located across two major metroplexes. We examined how local environmental variables and surrounding landscape composition impact bee abundance, richness, and evenness, including comparisons between groups with different nesting strategies and body sizes. We collected nearly 13,000 specimens and identified 172 species. We found that levels of regional land-use differentially impacted bee abundance and diversity depending on local habitat management. Specifically, within agriculture sites, bee richness was greater with increasing landscape-level semi-natural habitat, while in grassland sites, bee richness was similar across landscapes regardless of semi-natural habitat cover. Bee evenness at both site types declined with increasing landscape-level habitat heterogeneity, due to an increase of rare species at the grassland sites, but not in the agricultural sites; further indicating that diversity is driven by the interaction of local habitat quality and landscape-level habitat composition. We additionally found that agriculture sites supported higher abundances, but not richness, of small-bodied and below-ground nesting bees, while grassland sites supported higher abundances of above-ground nesting bees, and higher richness of large-bodied species. Increased levels of local bare ground were significantly related to multiple metrics of bee diversity, including greater below-ground nesting bee abundance and richness. Local floral richness was also significantly related to increases of overall bee abundance, as well as the abundance and richness of small bees. Overall, we suggest that local land managers can support bee abundance and diversity by conserving areas of bare soil and promoting native floral diversity, the latter especially critical in highly urban agricultural spaces. Our results provide the first documentation of significant interactions between local habitat management and landscape composition impacting insect communities in urban systems, indicating that bee conservation practices depend critically on land-use interactions across multiple spatial scales.

opencc-zeroDec 2018View details →
dryad36/100

Data from: A resurrection study reveals limited evolution of thermal performance in response to recent climate change across the geographic range of the scarlet monkeyflower

<p>Evolutionary rescue can prevent populations from declining under climate change, and should be more likely at high-latitude, "leading" edges of species' ranges due to greater temperature anomalies and gene flow from warm-adapted populations. Using a resurrection study with seeds collected before and after a seven-year period of record warming, we tested for thermal adaptation in the scarlet monkeyflower <i>Mimulus</i> <i>cardinalis</i>. We grew ancestors and descendants from northern-edge, central, and southern-edge populations across eight temperatures. Despite recent climate anomalies, populations showed limited evolution of thermal performance curves. However, one southern population evolved a narrower thermal performance breadth by 1.31 °C, which matches the direction and magnitude of the average decrease in seasonality experienced. Consistent with the climate variability hypothesis, thermal performance breadth increased with temperature seasonality across the species' geographic range. Inconsistent with performance trade-offs between low and high temperatures across populations, we did not detect a positive relationship between thermal optimum and mean temperature. These findings fail to support the hypothesis that evolutionary response to climate change is greatest at the leading edge, and suggest that the evolution of thermal performance is unlikely to rescue most populations from the detrimental effects of rapidly changing climate.</p>

opencc-zeroJun 2020View details →
dryad36/100

Data from: Multi-population seedling and soil transplants show possible responses of a common tropical montane tree species (Weinmannia bangii) to climate change

<p>A possible response of many plant species to global warming is migration to higher elevations. However, these migrations may not be required if species can tolerate higher temperatures, or may be prevented if there are other factors such as changes in soil conditions that make upslope areas unsuitable.</p> <p>We used a set of 3-year field transplant experiments in the remote Peruvian Andes to simulate two possible responses of an abundant tropical montane cloudforest tree species (Weinmania bangii) to global warming: (1) "upward migration", in which case seedlings of W. bangii's were grown at their current elevation/temperature but in soils transplanted from higher elevations; and (2) "migration failure", in which case seedlings were transplanted downslope along with their home soils into areas that are 1°C or 2°C warmer. We conducted separate experiments with populations from the upper/leading edge, middle and lower/trailing edges of W. bangii's elevational/thermal range to assess the influence of local adaptation on responses to changes in temperature or soil.</p> <p>We found that seedling survival and growth were not affected by changes in soil conditions, regardless of the origin population. However, seedling survival decreased with temperature. A simulated warming of 1°C caused a significant reduction in the survival of seedlings transplanted from the mid-range population, and 2°C warming caused a severe decrease in the survival of seedlings transplanted from both the mid-range and bottom-edge populations.</p> <p>Synthesis. Our findings reveal that rising temperatures are a serious threat to plants, especially in populations growing in the hotter portion of their species' range. At least in the case of W. bangii, novel soil conditions will not limit the establishment or growth of seedlings at higher elevations. As such, decreases in the survivorship at lower elevations may be offset through upward migrations as temperatures continue to increase.</p>

opencc-zeroAug 2020View details →
dryad36/100

Data from: Responses of sympatric canids to human development revealed through citizen science

<p>Measuring wildlife responses to anthropogenic activities often requires long-term, large-scale datasets that are difficult to collect. This is particularly true for rare or cryptic species, which includes many mammalian carnivores. Citizen science, in which members of the public participate in scientific work, can facilitate collection of large datasets while increasing public awareness of wildlife research and conservation. Hunters provide unique benefits for citizen science given their knowledge and interest in outdoor activities. We examined how anthropogenic changes to land cover impacted relative abundance of two sympatric canids, coyote (<i>Canis latrans</i>) and red fox (<i>Vulpes vulpes</i>) at a large spatial scale. In order to assess how land cover affected canids at this scale, we used citizen science data from bow hunter sighting logs collected throughout New York State, USA, during 2004–2017. We found that the two species had contrasting responses to development, with red foxes positively correlated and coyotes negatively correlated with the percentage of low-density development. Red foxes also responded positively to agriculture, but less so when agricultural habitat was fragmented. Agriculture provides food and denning resources for red foxes, whereas coyotes may select forested areas for denning. Though coyotes and red foxes compete in areas of sympatry, we did not find a relationship between species abundance, likely a consequence of the coarse spatial resolution used. Red foxes may be able to coexist with coyotes by altering their diets and habitat use, or by maintaining territories in small areas between coyote territories. Our study shows the value of citizen science, and particularly hunters, in collection of long-term data across large areas (i.e., the entire state of New York) that otherwise would unlikely be obtained.</p>

opencc-zeroJul 2021View details →
dryad36/100

Additive and non-additive responses of seedlings to simulated herbivory and drought data

<p>Drought is a global threat, increasing in severity and frequency throughout tropical ecosystems. Although plants often face drought in conjunction with biotic stressors, such as herbivory or disease, experimental studies infrequently test the simultaneous effects of drought and biotic stress. Because multiple simultaneous stressors may have non-additive and complex effects on plant performance, it is difficult to predict plant responses to multiple threats from research examining one stress at a time. Using an experimental approach in the greenhouse, we investigated potential non-additivity in seedling growth and survival to simulated drought and herbivory across a phylogenetically diverse pool of ten Hawaiian plant species. Overall, seedlings showed limited tolerance, defined as similar growth and survival in stressed compared to control (non-stressed) plants, to simulated herbivory and drought, with the combined effects of both stressors to be generally additive and negative across species. Significant variation in stress tolerance was detected among species, and species variation was explained, at least in part, by functional traits such that species with larger root/shoot ratios and smaller seeds, tended to demonstrate greater herbivory and drought tolerance. Future research incorporating additional trait analysis and different stressors could shed light on mechanisms underlying seedling stress tolerance and clarify whether additivity, as detected in this study, extends across other combinations of stressors. Such work will provide needed insights into the regeneration of seedlings in tropical forests under threats of herbivory and climate change.</p>

opencc-zeroAug 2020View details →
dryad36/100

Responses of White-throated sparrows to simulated winter storm cues

<p class="MsoNoSpacing">These data were used in the publication "Increased frequency of exposure to simulated winter storm cues negatively affects white-throated sparrows (<em>Zonotrichia albicollis</em>)" Front. Ecol. Evol. | doi: 10.3389/fevo.2020.00222</p> <p>Climate change is causing changes in weather patterns and more frequent extreme weather events. Although birds are often able to cope with and respond to inclement weather with physiological and behavioral responses, as weather events become more severe or frequent the adaptive coping responses of many species may be pushed beyond their limits. We investigated the effects of experimental recurrent inclement winter weather cues on body composition, glucocorticoid hormones, and behavior of white-throated sparrows (<em>Zonotrichia albicollis</em>). We used a hypobaric climatic wind tunnel to simulate storms by transiently decreasing barometric pressure and temperature, and measured behavioral responses, body composition, and baseline corticosterone levels in birds exposed, or not exposed (control), to different frequencies of simulated storms. In study 1, experimental birds were exposed to one storm per week over 9 weeks. In study 2, experimental birds were exposed to two storms per week over 12 weeks. Birds exposed to one simulated storm per week had higher fat and lean masses than control birds, with no differences in the amount of time groups spent feeding. This change in body composition suggests that birds were coping by increasing energy stores. In contrast, birds exposed to two simulated storms per week had lower fat masses compared to control birds, even though they spent more time feeding. Experimental birds in study 2 also had lower baseline corticosterone levels than controls. These changes suggest that the coping response observed in study 1 was overcome in study 2. These findings provide novel experimental evidence that birds detect and respond to changes in temperature and barometric pressure independent of other storm-related cues. One simulated storm per week resulted in potentially adaptive responses of increase mass. However, increasing the frequency of storm exposure to twice per week may exceed a physiological threshold for tolerance to which these songbirds are able to cope. These results also experimentally demonstrate that repeated exposure to inclement weather cues can directly affects birds' energy reserves, with strong implications for survival as severe weather events continue to become more prevalent.</p>

opencc-zeroAug 2020View details →
dryad36/100

Transient intracellular acidification regulates the core transcriptional heat shock response

<p>Heat shock induces a conserved transcriptional program regulated by heat shock factor 1 (Hsf1) in eukaryotic cells. Activation of this heat-shock response is triggered by heat-induced misfolding of newly synthesized polypeptides, and so has been thought to depend on ongoing protein synthesis. Here, using the budding yeast <em>Saccharomyces cerevisiae</em>, we report the discovery that Hsf1 can be robustly activated when protein synthesis is inhibited, so long as cells undergo cytosolic acidification. Heat shock has long been known to cause transient intracellular acidification which, for reasons which have remained unclear, is associated with increased stress resistance in eukaryotes. We demonstrate that acidification is required for heat shock response induction in translationally inhibited cells, and specifically affects Hsf1 activation. Physiological heat-triggered acidification also increases population fitness and promotes cell cycle reentry following heat shock. Our results uncover a previously unknown adaptive dimension of the well-studied eukaryotic heat shock response. </p>

opencc-zeroAug 2020View details →
dryad36/100

Sex differences in alternative reproductive tactics in response to predation risk in tree crickets

<p>1. Alternative reproductive tactics (ARTs) are variable, often discontinuous, behaviours that allow a particular sex to achieve enhanced mating success. Predation risk has been hypothesised to drive the evolution of ARTs, but few empirical studies have examined this. It is unclear whether predators affect fitness of the two sexes directly, by reducing survival, or indirectly, by altering mate-searching.</p> <p>2. In crickets, mate-search typically involves acoustic signalling by males and acoustic-mediated movement towards males by silent females. Males and females may however employ ARTs, which includes silent searching by males, and mating without performing phonotaxis in females.</p> <p>3. We empirically examined effects of increased predation risk on mate-searching behaviour and survival of male and female tree crickets, and their effects on mating success, using field-enclosure experiments with tree crickets <i>Oecanthus henryi</i> and their primary predator, green lynx spiders, <i>Peucetia viridans</i>. Crickets were allocated into three treatments with different levels of predation risk.</p> <p>4. Increased predation risk strongly reduced survival, and thereby mating success, for both sexes. With increasing predation risk, males reduced calling and increased movement towards neighbouring callers, with negative effects on mating success. By comparing with simulated random movement, we found that male movement was significantly directed towards other calling males, implying a switch to satellite strategies. Female movement behaviour, however, remained unaltered.</p> <p>5. Males and females thus differed in their response to comparable levels of predation risk, implying that the role of predation as a driver of alternative mate search strategies is sex-specific.</p>

opencc-zeroDec 2019View details →
dryad36/100

Root trait responses to drought are more heterogeneous than leaf trait responses

<p>Drought can strongly modify plant diversity and ecosystem processes. As droughts are expected to intensify in the future, it is important to better understand plant responses to this global driver. Root traits are an overlooked but powerful predictor of plant responses to drought because they are in direct contact with the soil environment and are responsible for taking up nutrients and water.</p> <p>Here, we determine which root traits are sensitive to drought and the magnitude of that response. We also tested whether root trait relationships with shoot biomass are affected by drought and to what extent all these responses depend on plant species identity. To do so, we conducted a glasshouse experiment with 24 plant species grown in pots (10 replicates per species), which included grasses, forbs and legumes. All replicates were well watered during the first month and then half of them were kept under drought (30 % water holding capacity (WHC)), with the other half serving as control (70 % WHC). After two months of treatment, leaf and root traits were measured.</p> <p>Leaf traits had a strong and more uniform response to drought compared to root traits. Root trait responses were variable and differed among plant species. Overall, grasses and several forbs had increased root diameter with drought while forbs had decreased specific root surface area (SRSA) and specific root length (SRL). Increase of root diameter and reduction of root elongation or sacrificing fine roots are different strategies that may promote nutrient and water acquisition, depending on plant species identity.</p> <p>Our results identify changes in root morphological traits as mechanisms to likely tolerate drought and highlight that, although such drought responses are species-specific, they are phylogenetically clustered.</p>

opencc-zeroAug 2020View details →
dryad36/100

Data from: Curation: heat stress responses and population genetics of the kelp Laminaria digitata (Phaeophyceae) across latitudes reveal differentiation among North Atlantic populations

<p>We aim to understand the thermal plasticity of a coastal foundation species across its latitudinal distribution by assessing physiological responses to high temperature stress in the kelp <i>Laminaria digitata</i> in combination with population genetic characteristics. We <a>hypothesize</a> that Arctic and cold-temperate populations are less heat resilient than warm-temperate populations. Using meristems of natural <i>L. digitata</i> populations from six locations ranging between Kongsfjorden, Spitsbergen (79°N), and Quiberon, France (47°N), we performed a common-garden heat stress experiment applying 15°C to 23°C over eight days. We assessed growth, quantum yield, carbon and nitrogen storage, and xanthophyll pigment contents as response traits. Population connectivity and genetic diversity were analysed with microsatellite markers to relate heat resilience to genetic features and phylogeography. Microsatellite genotyping revealed all sampled populations to be genetically distinct, underlying strong hierarchical structuring between and within southern and northern clades. Genetic diversity was lowest in the isolated population of the North Sea island of Helgoland and highest in Roscoff in the English Channel. Results from the heat stress experiment suggest that the upper temperature limit of <i>L. digitata</i> is nearly identical across its distribution range, but subtle differences we<a>re </a>revealed for the two populations currently at their warm limits. They respectively <a>show</a> a significant advantage in growth at 19°C and 21°C (Quiberon) and a lack of stress responses in photosynthetic quantum yield and xanthophyll pigments at 23°C (Helgoland). In addition, quantum yield indicated the highest heat sensitivity in <i>L. digitata</i> from the northernmost population in Spitsbergen. All together, these results support the hypothesis of moderate local differentiation across <i>L. digitata</i>'s European distribution, whereas effects are likely too weak to ameliorate the species' capacity to withstand ocean warming and marine heatwaves at the southern range edge.</p>

opencc-zeroAug 2020View details →
dryad36/100

Heat stress responses of the kelp Laminaria digitata (Phaeophyceae) across Northeast Atlantic populations: growth, biochemistry, chlorophyll fluorescence, pigments

<p>To understand the thermal plasticity of a coastal foundation species across its latitudinal distribution, we assess physiological responses to high temperature stress in the kelp <i>Laminaria digitata</i> in combination with population genetic characteristics and relate heat resilience to genetic features and phylogeography. We hypothesize that populations from Arctic and cold-temperate locations are less heat resilient than populations from warm distributional edges. Using meristems of natural <i>L. digitata</i> populations from six locations ranging between Kongsfjorden, Spitsbergen (79°N), and Quiberon, France (47°N), we performed a common-garden heat stress experiment applying 15°C to 23°C over eight days. We assessed growth, photosynthetic quantum yield, carbon and nitrogen storage, and xanthophyll pigment contents as response traits. Population connectivity and genetic diversity were analysed with microsatellite markers. Results from the heat stress experiment suggest that the upper temperature limit of <i>L. digitata</i> is nearly identical across its distribution range, but subtle differences in growth and stress responses were revealed for three populations from the species' ecological range margins. Two populations at the species' warm distribution limit showed higher temperature tolerance compared to other populations in growth at 19°C and recovery from 21°C (Quiberon, France), and photosynthetic quantum yield and xanthophyll pigment responses at 23°C (Helgoland, Germany). In <i>L. digitata</i> from the northernmost population (Spitsbergen, Norway), quantum yield indicated the highest heat sensitivity. Microsatellite genotyping revealed all sampled populations to be genetically distinct, with a strong hierarchical structure between southern and northern clades. Genetic diversity was lowest in the isolated population of the North Sea island of Helgoland and highest in Roscoff in the English Channel. All together, these results support the hypothesis of moderate local differentiation across <i>L. digitata</i>'s European distribution, whereas effects are likely too weak to ameliorate the species' capacity to withstand ocean warming and marine heatwaves at the southern range edge.</p>

opencc-zeroAug 2020View details →
dryad36/100

Data from: Developmental nutrition modulates metabolic responses to projected climate change

<ol> <li>Current policy has the world on track to experience around 3°C of warming by 2100. The responses of organisms to our warming world will be mediated by changes in physiological processes, including metabolic rate. Metabolic rate represents the energetic cost of living, and is fundamental to understanding the energy required to sustain populations. Current evidence indicates that animals have a limited capacity to adapt to warmer environments by reducing their metabolic rate. Consequently, animals may be more reliant on metabolic plasticity to ameliorate the thermodynamic effect of rising temperatures on physiological rates. However, metabolic plasticity is influenced by other environmental factors, including the nutritional quality of food. Elevated levels of atmospheric CO<sub>2</sub> are expected to reduce the protein and increase the carbohydrate concentration in plants, but we do not know how this will affect the response of metabolic rate to climate warming.</li> <li>Here we test the interactive effects of developmental dietary protein and carbohydrate concentrations on the metabolic plasticity of adult <i>Drosophila melanogaster</i> in response to a 3°C increase in temperature while accounting for variation associated with body mass and activity (resting metabolic rate).</li> <li>We show that the thermal sensitivity of resting metabolic rate is modulated by developmental nutrition with animals reared on nutritionally poor, low-protein diets showing the greatest increase in resting metabolic rate in response to simulated climate warming. We also show that if the nutritional quality of resources is unaffected by climate change, then temperature-induced increases in resting metabolic rate will be offset by decreases in mass, but the absolute energy requirements of animals will be elevated relative to current conditions despite this. If, on the other hand, temperatures rise and resources become more calorie-dense and carbohydrate-rich, then the resting metabolic rate of animals will remain relatively unchanged, but decreases in mass and activity may drive down the absolute energy requirements of animals.</li> <li>In the absence of evolutionary adaptation, these findings suggest that the combined plastic response of physiological, morphological, and behavioural traits to temperature and nutrition may be an important determinant of the ultimate outcome of climate change for populations.</li> </ol>

opencc-zeroAug 2020View details →
dryad36/100

Extending the ecology of fear: Parasite-mediated sexual selection drives host response to parasites

<p>The 'ecology of fear' describes the negative effects natural enemies have on potential victims even when those victims are not consumed or infected. Although recent work has demonstrated parasites have non-consumptive effects (NCE) on potential hosts, how these effects vary within host populations is not well understood. We investigated how NCE vary based on host risk of infection and relative cost of infection by measuring the metabolic rate (MR) of naive <em>Drosophila nigrospiracula</em> exposed to an ectoparasite, <em>Macrocheles subbadius</em>. We tested two mutually exclusive hypotheses: 1) asymmetrical costs of infection drive adaptions for stronger responses to parasite exposure; or 2) asymmetrical risks of infection drive adaptions for stronger responses to parasite exposure. In this system, male flies have higher costs of infection relative to female flies due to parasite-mediated sexual selection; similarly, virgin females experience higher costs of infection relative to mated females. Risk of infection also varies among flies because mites preferentially infect female flies over males, and mites preferentially infect mated females over virgin females. Our results were compatible with the hypothesis that costs of infection drive the strength of response to mite risk. Female flies responded to parasite exposure with a 15.1% increase in MR, while exposed males showed a stronger response with a 31.3% increase in MR. Mated females increased their MR by 34.8% during mite exposure whereas virgin females experienced an increase of 61.2%. Our findings suggest that NCE of parasites can vary based on state-dependent costs of infection.</p>

opencc-zeroAug 2020View details →
dryad36/100

Data from: Plant trait response of tundra shrubs to permafrost and nutrient addition

<p>Plants may alter their strategies, such as growth and resource acquisition, as a result of climate change, especially in areas like the Arctic. These changes might affect in turn ecosystem functions and vegetation-climate interactions. Plant traits reflect both strategies and plant trade-offs in response to environmental conditions. In combination with observational data, experiments mimicking future climate conditions and data involving multiple leaf and stem traits, can contribute to a better mechanistic understanding of feedbacks between shrub growth strategies, permafrost thaw and carbon and energy fluxes.</p> <p>This dataset contains both metadata and plant trait data measured in individuals of four arctic shrub species under experimental conditions. The permafrost thaw and fertilization experiment (Peng et al., 2017) ran for four years (2011-2014) in the nature reserve of Kytalyk, north-eastern Siberia (70°49'N, 147°28'E). The shrub species, dominant at the research site, were the deciduous species <em>Betula nana</em> ssp. <em>exilis</em> (Sukazcev) Hultén and <em>Salix pulchra</em> Cham., and the evergreen species <em>Ledum palustre</em> ssp. <em>decumbens</em> (Aiton) Hultén and <em>Vaccinium vitis-idaea</em> L.</p>

opencc-zeroAug 2020View details →
zenodo36/100

Marine plankton show threshold extinction response to Neogene climate change

<p>Taxonomic occurrence datasets to accompany the article entitled &quot;Marine plankton show threshold extinction response to Neogene climate change.&quot;&nbsp; Spreadsheets contain International Ocean Discovery Program (IODP) site information, sample names, depth in meters below the seafloor (mbsf), age (in millions of years), and the number of occurrences of each taxon per sample.&nbsp; For the eastern equatorial Pacific (EEP) dataset, ages were calculated&nbsp;using&nbsp;the astronomically-tuned model of Tian <em>et al.</em> (2018).&nbsp; Southern Ocean (SO) age information comes from the Neptune Sandbox Berlin (NSB) database (Renaudie <em>et al. </em>2020), with age model quality reported as: very good (VG), good (G), medium (M), or&nbsp;poor (P).&nbsp; Only species-level data associated with &quot;very good&quot; age models were&nbsp;analyzed in our study; however, here we provide all data at the species and genus level, with age models of any quality.</p>

opencc-by-4.0Sep 2020View details →
zenodo36/100

PsPM-SSNA_3: Skin conductance response to stimulation of the peripheral median nerve with electrical impulses

<p>This dataset includes skin conductance response (SCR) for each of 4 healthy unmedicated participants (4 females, age range 24-49 years) in response to repeated stimulation of the peripheral median nerve with single impulses at successively increasing frequencies. Prior to the experiment, mepivacaine was delivered to induce axillary nerve blockade.</p>

opencc-by-4.0Jun 2020View details →
dryad36/100

Data from: Predicting evolutionary responses to interspecific interference in the wild

Many interspecifically territorial species interfere with each other reproductively, and in some cases, aggression toward heterospecifics may be an adaptive response to interspecific mate competition. This hypothesis was recently formalized in an agonistic character displacement (ACD) model which predicts that species should evolve to defend territories against heterospecific rivals above a threshold level of reproductive interference. To test this prediction, we parameterized the model with field estimates of reproductive interference for 32 sympatric damselfly populations and ran evolutionary simulations. Asymmetries in reproductive interference made the outcome inherently unpredictable in some cases, but 80% of the model's stable outcomes matched levels of heterospecific aggression in the field, significantly exceeding chance expectations. In addition to bolstering the evidence for ACD, this paper introduces a new, predictive approach to testing character displacement theory that, if applied to other systems, could help resolve longstanding questions about the importance of character displacement processes in nature.

opencc-zeroSep 2020View details →
dryad36/100

Data for: Intraspecific variation in responses to aposematic prey in a jumping spider (Phidippus regius)

<p>Aposematic signals often allow chemically defended prey to avoid attack from generalist predators, including jumping spiders. However, not all individual predators in a population behave in the same way. Here, in laboratory trials, we document that most individual <em>Phidippus regius</em> jumping spiders attack and reject chemically defended milkweed bugs (<em>Oncopeltus fasciatus</em>), immediately releasing them unharmed. However, a small number of individuals within the population kill and completely consume these presumably toxic prey items. This phenomenon was infrequent with only 14% of our sample (17/122) consuming the milkweed bugs over the course of the study. Individuals that killed and consumed bugs often did so repeatedly; specifically, individuals that consumed a bug in their first test were more likely to kill a bug in their second test and also tended to consume them again. We explored what might drive some (but not all) individuals to consume these bugs and found that neither sex, sexual maturity, body size, laboratory housing type, nor being wild‐caught or being laboratory‐reared, predicted milkweed bug consumption. Consuming bugs had no negative effects on spider mass or body condition; contrary to expectations, individuals that consumed milkweed bugs actually gained more body mass and increased in body condition. We discuss potential behavioural and physiological variation between individuals that may drive these rare behaviours and the implications for the evolution of prey defences.</p>

opencc-zeroSep 2020View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.