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Data for One Earth publication "Breaching planetary boundaries: Over half of global land area suffers critical losses in functional biosphere integrity"
<p>This repository contains data and processing scripts for the study: Stenzel et al. 2025, One Earth, "Breaching planetary boundaries: Over half of global land area suffers critical losses in functional biosphere integrity".</p>
Data from: one ant's trash is another ant's treasure: army ant middens provide resources for diverse ant assemblages
<p>The army ant <em>Eciton burchellii </em>boasts more animal associates than any other animal species yet described, but the relationship between army ants and other ant species has only been studied in the context of predation. The waste deposits (middens) of army ant colonies are nitrogen-rich, a potentially high-value nutrient source for leaflitter arthropods. We explored this bottom-up role of army ant middens in the context of tropical ant communities. Our three main questions were 1) Which ant species forage on army-ants middens? 2) How does the bi-phasic life cycle of army ant colonies (affecting midden size, persistence, and abundance) affect which and how many ant species a midden boasts? 3) How do the ants that forage on army ant middens differ across elevations? Across 39 bivouacs we found 36 species of ants foraging on army ant middens. These included highly predatory ants, nitrogen-limited arboreal ants, and fungus-farming ants. Per-midden richness was significantly lower for the usually smaller middens deposited during the nomadic phase and was higher for the typically larger middens deposited during the statary phase. Per-midden richness was not significantly different across elevations, but there was far greater species turnover across elevations than across phases within the same elevational site. Our results suggest that army ant middens are an important resource for a wide variety of tropical ants, informing a better understanding of the complex network of associations revolving around this keystone species.</p>
Additional resources for "Day ahead electricity price forecasting with neural networks - one or multiple outputs?"
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Animal disease data complementing the European Union One Health 2022 Zoonoses Report
<p>This dataset contains the mandatory annual data reported for bovine tuberculosis and for bovine and ovine and caprine brucellosis based on Directive 2003/99.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - the United Kingdom (Northern Ireland)
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Croatia
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Ireland
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Sweden
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Norway
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Luxembourg
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Sample based prevalence data complementing the European Union One Health 2022 Zoonoses Report - Finland
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Prevalence data complementing the European Union One Health 2022 Zoonoses Report
<p>This dataset contains monitoring data on zoonoses and zoonotic agents under the Directive 2003/99/EC. This Directive requires Member Sates (MSs) to collect, evaluate and report data on zoonoses and zoonotic agents. MSs can also report monitoring data and information on some other pathogenic microbiological agents in foodstuffs. Relevant EU legislation is: Commission Regulation (EC) No 2073/2005,Commission Regulation (EC) No 1441/2007, Commission Regulation (EU) No 1086/2011, Commission Regulation (EU) No 209/2013, Commission Regulation(EU) No 217/2014.</p>
Food and waterborne outbreaks data complementing the European Union One Health 2022 Zoonoses Report
<p>Food and waterborne outbreaks data reported under the framework of Directive 2003/99/EC and in accordance with the update of the technical specifications for harmonised reporting of FBOs through the EU reporting system in accordance with Directive 2003/99/EC. This dataset includes the number of outbreaks, as well as the number of human cases, hospitalisations and deaths, per causative agent. In addition, other information can include data on causative agents, food vehicles, and the factors in food preparation and handling that contributed to the food-borne outbreaks. Reporting countries can also provide information on the nature of the evidence supporting the suspicion of the food vehicle. This evidence can be epidemiological, microbiological, descriptive environmental, or based on product tracing investigations. </p>
One Chase Manhattan Bank
Also known as 28 Liberty Street, is a 813-foof tall modern skyscraper that is built in 1961 which finished construction as the 8th tallest building in the world, surpassing both Union Carbide Building (270 Park Avenue) which is 708' and Panam (now as MetLife) Building measuring 808' but built just two years later. Source: Objaverse 1.0 / Sketchfab
Castlerigg Stone Circle (one stone)
One of the 38 large stones which make up Castlerigg Stone Circle in the English Lake District. The Neolithic stone circle is thought to have been constructed in around 3000 BC, and is potentially one of the earliest in the country. The monument includes an oval enclosure of stones which contains a smaller enclosure and two barrows, and an outlying stone. The oval enclosure includes 38 large stones, some standing up to 3m high and some fallen, and 3 smaller stones; it encloses an area measuring approximately 32m north-south by 29m east-west. Castlerigg Stone Circle remains unencumbered by modern development, and is one of the finest examples of a large irregular stone circle in England. https://historicengland.org.uk/listing/the-list/list-entry/1011362 The model was created from 83 photographs. Source: Objaverse 1.0 / Sketchfab
Dou Food Vessel base, one of a pair, 400 BCE
Ancient Chinese bronze food vessel (base), dating to 400 BCE, now in the collection of the Minneapolis Institute of Art. A scan of the lid of the vessel is here: https://skfb.ly/6As6G More information: https://collections.artsmia.org/art/11973/dou-food-vessel-one-of-a-pair-china Source: Objaverse 1.0 / Sketchfab
Annalakshmi - One who Bestows Grain
Annalakshmi = Annam + Lakshmi. Annam - Food. Lakshmi - one who Bestows. Every south Indian family will have this brass or silver idol planted in a bowl of rice. This symbolizes that God will forever bless the family with shortageless food. The female member mostly who cook and serve food for the family are also regarded as Annalakshmi-es. Source: Objaverse 1.0 / Sketchfab
Data from: the characteristics and treatment for severe postpartum hemorrhage in different midwifery hospitals in one district of Beijing in China: an institution-based, retrospective cohort study
<p><span><strong>Objective:</strong> </span><span>To identify the characteristics and treatment approaches for Severe Postpartum Hemorrhage (SPPH) patients in various midwifery institutions in one district in Beijing, especially those without identifiable antenatal PPH risk factors, to improve regional SPPH rescue capacity.</span></p> <p><strong><span>Design:</span></strong><span> Retrospective cohort study</span></p> <p><span><strong>Setting:</strong> </span><span>This study was conducted at n</span><span>ine tertiary-level hospitals and ten secondary-level hospitals</span><span> in Haidian district of Beijing from January 2019 to December 2022. </span></p> <p><strong><span>Participants:</span></strong> <span>The major inclusion criterion was SPPH cases with blood loss </span>≥<span>1500 ml or needing a packed blood product transfusion </span>≥<span>1000 ml within 24 h after birth</span><span>.</span><span> A total of 324 mothers suffering from SPPH were reported to the Regional Obstetric Quality Control Office from 19 midwifery hospitals. </span></p> <p><span><strong>Outcome measures:</strong> </span><span>The pregnancy characteristics collected included: age at delivery, gestational weeks at delivery, height, parity, delivery mode, antenatal PPH risks, etiology of PPH, bleeding amount, PPH complications, transfusion amount, and PPH management. SPPH characteristics were compared between two levels of midwifery hospitals and their association with antenatal PPH high-risk factors was determined.</span></p> <p><span><strong>Results:</strong> </span><span>SPPH was observed in 324 mothers out of 106697 mothers in the four years. There were 74.4% and 23.9% cases of SPPH without detectable antenatal PPH high-risk factors in secondary and tertiary midwifery hospitals, respectively. Primary uterine atony was the leading cause of SPPH in secondary midwifery hospitals, whereas placental-associated disorders were the leading causes in tertiary institutions, accounting for over 50% of cases. In all SPPH cases, the rates of red blood cell transfusion over 10U, </span><span>unscheduled returns to the operating room,</span><span> and adverse PPH complications were higher in patients without antenatal PPH risk factors. Secondary hospitals had significantly higher rates of trauma compared with tertiary institutions.</span></p> <p><span><strong>Conclusion:</strong> </span><span>Examining SPPH cases at various institutional levels offers a more comprehensive view of regional SPPH management and enhances targeted training in this area.</span></p>
Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya
<p><strong><span>Background</span></strong></p> <p><span>Livestock systems have been proposed as a reservoir for antimicrobial-resistant (AMR) bacteria and AMR genetic determinants that may infect or colonise humans, yet quantitative evidence regarding their epidemiological role remains lacking. Here we used a combination of genomics, epidemiology and ecology to investigate patterns of AMR gene carriage in <em>Escherichia</em> <em>coli</em>, regarded as a sentinel organism.</span></p> <p><strong><span>Methods</span></strong></p> <p><span>We conducted a structured epidemiological survey of 99 households across Nairobi, Kenya, and whole genome sequenced <em>E</em>. <em>coli</em> isolates from 311 human, 606 livestock, and 399 wildlife faecal samples. We used statistical models to investigate the prevalence of AMR carriage and characterise AMR gene diversity and structure of AMR genes in different host populations across the city. We also investigated house-hold level risk factors for exchange of AMR genes between sympatric humans and livestock.</span></p> <p><strong><span>Findings</span></strong></p> <p><span>We detected 56 unique acquired genes along with 13 point mutations present in variable proportions in human and animal isolates, known to confer resistance to nine antibiotic classes. We find that AMR gene community composition is not associated with host species, but AMR genes were frequently co-located, potentially enabling the acquisition and dispersal of multi-drug resistance in a single step. We find that whilst keeping livestock had no influence on human AMR gene carriage, the potential for AMR transmission across human-livestock interfaces is greatest when manure is poorly disposed of and in larger households.</span></p> <p><strong><span>Conclusions</span></strong></p> <p><span>Findings of widespread carriage of AMR bacteria in human and animal populations, including in long-distance wildlife species, in community settings, highlight the value of evidence-based surveillance to address antimicrobial resistance on a global scale. Our genomic analysis provided in-depth understanding of AMR determinants at the interfaces of One-Health sectors that will inform AMR prevention and control.</span></p>
Replication Data for: One-dimensional proximity superconductivity in the quantum Hall regime
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.