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249
datasets available to search
ShareScore release 0.9.0
Dataset results
249 results for “3D Structure”
Meiotic cohesin RAD21L shapes 3D genome structure and transcription in the male germline [HiC]
GEO Series GSE297600. Mus musculus. 7 samples. Type: Other.
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops (SDS test)
GEO Series GSE280482. Homo sapiens. 71 samples. Type: Other.
A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells
GEO Series GSE154353. Mus musculus; Homo sapiens. 3 samples. Type: Other.
Hmga2 protein loss alters nuclear envelope and affects 3D chromatin structure upon the induction of pluripotent stem cell commitment
GEO Series GSE200673. Mus musculus. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
GEO Series GSE130711. Homo sapiens. 4238 samples. Type: Methylation profiling by high throughput sequencing; Other.
SHARC-seq: High throughput in vivo determination of 3D RNA structures and dynamics
GEO Series GSE167812. Homo sapiens; synthetic construct. 12 samples. Type: Other.
O-GlcNAcylation of CTCF regulates 3D chromatin structure [ChIP-seq]
GEO Series GSE255856. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (cell-line)
GEO Series GSE285230. Homo sapiens; Mus musculus. 6 samples. Type: Other.
O-GlcNAcylation of CTCF regulates 3D chromatin structure [RNA-seq]
GEO Series GSE255854. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
TADs are 3D structural units of higher-order chromosome organization in Drosophila [S2R+]
GEO Series GSE99104. Drosophila melanogaster. 2 samples. Type: Other.
A map of cis-regulatory elements and 3D genome structures in zebrafish
GEO Series GSE134055. Danio rerio. 204 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
The Lithospheric Structure of the Saharan Metacraton from 3D Integrated Geophysical-Petrological Modelling
<p>We provide the final lithospheric model of Saharan Metacraton resulting from our work presented in the manuscript. It is part of the archive file “Model_data_2020-02-06”</p>
Figure 1 from: Peterson D (2017) Streamlining the Process of 3D Printing a Brain From a Structural MRI. Research Ideas and Outcomes 3: e13394. https://doi.org/10.3897/rio.3.e13394
Figure 1 - A frame from the quality control animation generated by the Docker image.
Functional characterization of 3D-protein structures informed by human genetic diversity - data
<p>Supplementary data for https://www.biorxiv.org/content/early/2017/08/29/182287</p>
Molecular simulation-based 3D structural construction of olfactory receptor with agonist binding
<p><span>The structure of representative LSD No. 3, the structure of representative LSD No. 6, the structure of representative LSD No. 7, the initial structure of OR9Q2, SMILES of decoys used for docking, the python script of LSD analysis, the parameter file of colabfold, the output file of CHARMM-GUI, the parameter file of virtual screening test and the parameter file of production MD are deposited in this dataset.</span></p>
Heart structure as visualized with high-resolution normal multiscan mode CECT in 3D (left) and on 2D orthoslice (right)
<p>Ao = aorta, RV = right ventricle, LV = left ventricle, RA = right atrium, LA = left atrium, RAA = right atrial appendage, LAA = left atrial appendage, PV = pulmonary valve, TV = tricuspid valve, AV = aortic valve, MV = mitral valve, PM = papillary muscle.</p>
🔎 Richat Structure 👁️ Elevation Map (3D model)
# Welcome Explorer 🔱 🌍 In 2021 our team has completed an expedition to the "**Eye of the Sahara**" (Mauritania, North-west Africa) to document and explore the most likely location of Atlantis in the Richat Structure. 🔎 We documented multiple fortresses and collected various samples. We are currently examining and organizing the data with experts, so the results will be published in our interactive documentary movie. (It's coming soon, so feel free to subscribe and follow to stay updated) atlantis-together.com 📜 The area of the Richat Structure matches Plato's description of Atlantis and multiple other reasons suggest that "the lost city" could have been located there. However, the Richat Structure was never excavated by modern archaeological methods and interdisciplinary research so it's important to explore and globally organize the crowdfunded excavation. 📹 3D model created by András Sörös: facebook.com/andras.soros.3 👁️🗨️Have a great exploration! 🔎📜 atlantis-together.com Source: Objaverse 1.0 / Sketchfab
Three-dimensional (3D) Holographic Display for Ultrasound-Guided Structural Heart Disease Procedures
ClinicalTrials.gov study NCT05514626. IPD Sharing: NO. Countries: 1. Publications: 0.
Structured 3D Exercise and the Conventional Exercise Program for Scoliosis in Children With Rheumatic Disease
ClinicalTrials.gov study NCT05377086. IPD Sharing: Not stated. Countries: 1. Publications: 0.
The Development and Study of a 3D-Printed Model for Surgical Planning of Lung Cancer with Realistic Subsegmental Boundaries and Complete Tissue Structures
ClinicalTrials.gov study NCT06507774. IPD Sharing: NO. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.