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174 results for “Klebsiella”
The global RNA-RNA interactome of Klebsiella pneumoniae unveils a small RNA regulator of cell division (RIP-Seq)
GEO Series GSE244639. Klebsiella pneumoniae subsp. pneumoniae. 8 samples. Type: Other.
RNAseq analysis of mouse lung transcriptome from allergic and non-allergic mice prior to and following lung Klebsiella pneumoniae infection
GEO Series GSE57602. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
The transcriptome of Klebsiella oxytoca M5a1 during onset of nitrogen fixation
GEO Series GSE164668. Klebsiella oxytoca. 3 samples. Type: Expression profiling by high throughput sequencing.
Data from: Development and validation of a core genome multilocus sequence typing (cgMLST) scheme for Klebsiella oxytoca
<p>The dataset hereby shared contains the genomes used to create and validate a newly proposed schema for <i>Klebsiella oxytoca.</i> </p><p>As reference dataset, all publicly available <i>K. oxytoca</i> draft and complete genomes (199) were downloaded from RefSeq in NCBI database in September 2021. All assemblies were filtered by quality and identification methods in order to remove highly fragmented genomes (more than 200 contigs) and genomes that did not correspond to <i>K. oxytoca sensu stricto</i>. A series of assemblies, including complete and draft genomes, were removed because they (i) did not correspond to <i>K. oxytoca</i> species based on MLST or rMLST, and because they (ii) produced ANI values lower than 96% against <i>K. oxytoca</i>. Apart from some genomes that had no correspondence to<i> K. oxytoca,</i> several others were discarded because they did not correspond to <i>K. oxytoca </i>species sensu stricto, but other closely related species included in the <i>K. oxytoca </i>species complex, such as <i>K. michiganensis</i> or <i>K. grimontii.</i> Additional identification of blaOXY gene variants supported this observation. Finally, genomes that had not been assigned an assigned ST were also removed, since they would not contribute to the schema validation. Therefore, the final dataset consisted in 16 high-quality complete genomes of <i>K. oxytoca sensu stricto. </i></p><p> </p>
Antimicrobial Resistance Rate In Escherichia Coli And Klebsiella Pneumonia : A Retrospective Study
ClinicalTrials.gov study NCT04196387. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
Clinical Characteristics for the Critical Ill Patients With Klebsiella Pneumoniae Infection
ClinicalTrials.gov study NCT04404582. IPD Sharing: NO. Countries: 0. Publications: 0.
The Incidence of Extended-spectrum β-lactamase (ESBL) Klebsiella Pneumonia in Patient on Renal Replacement Therapy
ClinicalTrials.gov study NCT01612182. IPD Sharing: Not stated. Countries: 1. Publications: 0.
The global RNA-RNA interactome of Klebsiella pneumoniae unveils a small RNA regulator of cell division (dRNA-Seq)
GEO Series GSE244635. Klebsiella pneumoniae subsp. pneumoniae. 8 samples. Type: Other.
Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling [tiling arrays]
GEO Series GSE35746. Klebsiella pneumoniae subsp. pneumoniae MGH 78578. 2 samples. Type: Expression profiling by array.
Transcriptomes of capsule swapped-strains in Klebsiella (K1, K2, K3, K24)
GEO Series GSE306874. Klebsiella pneumoniae. 85 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomes of capsule swapped-strains in Klebsiella
GEO Series GSE306875. Klebsiella pneumoniae. 85 samples. Type: Expression profiling by high throughput sequencing.
Draft genome sequence of Klebsiella quasipneumoniae subsp. similipneumoniae strain IF3SW-P1 isolated from the International Space Station
In 2015, the Advanced Resistive Exercise Device (ARED) foot panel on the International Space Station (ISS) was sampled to identify culturable microorganisms. The whole-genome of the strain IF3SW-P1 was sequenced using the Oxford Nanopore Technologies platform and identified as Klebsiella quasipneumoniae subsp. quasipneuomoniae, a Biosafety Level-2 (BSL-2) human pathogen. This whole-genome sequence will aid in comparative genomic analyses with Earth-origin pathogens for differences in virulence and antimicrobial resistance in microorganisms exposed to spaceflight conditions.
Comparative Genomic Analysis of Klebsiella Exposed to Various Space Conditions at the International Space Station
Due to the bacteria's evolved resistance to radiation, Klebsiella poses a great threat to not only planetary protection, but also to the integrity of future biological experiments in outer space. While previous literature has shown varying degrees of sensitivity in klebsiella to a high radiation environment, not much is known about the genetic component that yields this microbial advantage. Our research objective is to pinpoint the genetic advantage some Klebsiella species acquire as they are exposed to a space-like environment through a comparison of whole genomes sequences to better control microbial contamination onboard the ISS.
Inappropriate use of antibiotics exacerbates inflammation through OMVs-induced pyroptosis in multidrug-resistant Klebsiella pneumoniae infection
GEO Series GSE182766. Klebsiella pneumoniae. 6 samples. Type: Expression profiling by high throughput sequencing.
Vaccine protection against multidrug-resistant Klebsiella pneumoniae in a non-human primate model of severe lower respiratory tract infection
GEO Series GSE137135. Macaca fascicularis. 30 samples. Type: Expression profiling by high throughput sequencing.
Influence of quorum sensing on Klebsiella pneumoniae outer membrane vesicles
GEO Series GSE230304. Klebsiella pneumoniae. 9 samples. Type: Expression profiling by high throughput sequencing.
Gene expression in Klebsiella pneumoniae
GEO Series GSE24688. Klebsiella pneumoniae; Klebsiella pneumoniae subsp. pneumoniae MGH 78578. 30 samples. Type: Expression profiling by array.
Surfactant protein A (SP-A) variants and sex-specific regulation of gene expression networks in alveolar macrophages in response to Klebsiella pneumoniae-induced lung infection
GEO Series GSE144595. Mus musculus. 58 samples. Type: Expression profiling by high throughput sequencing.
RpdD and RpoS ChIP-exo in Klebsiella pneumoniae
GEO Series GSE226119. Klebsiella pneumoniae. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The CpxR response regulator mediates the virulence of Klebsiella pneumoniae by regulating the expression of virulence associated genes
GEO Series GSE300466. Klebsiella pneumoniae. 6 samples. Type: Expression profiling by high throughput sequencing.
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International Brain Laboratory public data
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OpenNeuro
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