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188 results for “Microbial diversity”
Data from: Distribution patterns of microbial communities in ultramafic landscape: a metagenetic approach highlights the strong relationships between diversity and environmental traits
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Data from: The relationship between spatial structure and the maintenance of diversity in microbial populations
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Soil microbial legacy drives crop diversity advantage: linking ecological plant-soil feedback with agricultural intercropping
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Data from: Deciphering the associations between soil microbial diversity and ecosystem multifunctionality driven by long-term fertilization management
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Microbial diversity regulates ecosystem multifunctionality during natural secondary succession
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Data from: Plant, soil and microbial controls on grassland diversity restoration: a long-term, multi-site mesocosm experiment
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Plant and soil microbial diversity and related spatial and environmental factors in the grasslands of northern China
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Broccoli consumption alters microbial diversity, host and bacterial gene expression in mice fed a Total Western Diet
GEO Series GSE283608. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing.
Overall functional diversity of microbial communities in three full-scale activated sludge bioreactors
GEO Series GSE53744. Archaea; activated sludge metagenome; Bacteria; Eukaryota; Viruses. 9 samples. Type: Genome variation profiling by array.
Abundant and diverse non-coding small RNAs identified in an extremophilic microbial community using metatranscriptomics
GEO Series GSE137164. halite metagenome. 45 samples. Type: Expression profiling by high throughput sequencing.
Natural Microbial exposure populates the maternal fetal interface with diverse T cells.
GEO Series GSE293451. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Microbial and Functional Diversity within the Phyllosphere of Espeletia sp. in Andean High Mountain Ecosystems
GEO Series GSE70539. Archaea; plant metagenome; Bacteria; Eukaryota; Viruses. 16 samples. Type: Genome variation profiling by array.
Structure, function and microbial ecology of diverse MarR bacterial regulators of auxin catabolism
GEO Series GSE210968. Variovorax paradoxus. 31 samples. Type: Expression profiling by high throughput sequencing.
Unveiling microbial dynamics in lung adenocarcinoma and adjacent nontumor tissues: Insights from nicotine exposure and diverse clinical stages via Nanopore Sequencing Technology
GEO Series GSE262090. metagenomes. 74 samples. Type: Other.
A metagenomic study revealing unexpectedly diverse functional groups in microbial communities of deep-ground oil
GEO Series GSE55293. Bacteria; uncultured bacterium. 9 samples. Type: Other.
CAZyChip: Dynamic assessment of exploration of glycoside hydrolases in microbial diversity ecosystems.
GEO Series GSE80173. Bacteria. 94 samples. Type: Expression profiling by array.
Broccoli consumption alters microbial diversity, host and bacterial gene expression in mice fed a Total Western Diet [RNA-seq]
GEO Series GSE280358. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
Soil microbial diversity and enzyme activity responses to experimental warming and disturbance in a forest ecotone (B4WarmED)
<p>The contents of this archive include data and R code used in Van Nuland et al. (2020) “Warming and disturbance alter soil microbiome diversity and function in a northern forest ecotone” in <em>FEMS Microbiology Ecology</em>.</p>
Data from: Microbial diversity in the floral nectar of Linaria vulgaris along an urbanization gradient
Background: Microbes are common inhabitants of floral nectar and are capable of influencing plant-pollinator interactions. All studies so far investigated microbial communities in floral nectar in plant populations that were located in natural environments, but nothing is known about these communities in nectar of plants inhabiting urban environments. However, at least some microbes are vectored into floral nectar by pollinators, and because urbanization can have a profound impact on pollinator communities and plant-pollinator interactions, it can be expected that it affects nectar microbes as well. To test this hypothesis, we related microbial diversity in floral nectar to the degree of urbanization in the late-flowering plant Linaria vulgaris. Floral nectar was collected from twenty populations along an urbanization gradient and culturable bacteria and yeasts were isolated and identified by partially sequencing the genes coding for small and large ribosome subunits, respectively. Results: A total of seven yeast and 13 bacterial operational taxonomic units (OTUs) were found at 3 and 1 % sequence dissimilarity cut-offs, respectively. In agreement with previous studies, Metschnikowia reukaufii and M. gruessi were the main yeast constituents of nectar yeast communities, whereas Acinetobacter nectaris and Rosenbergiella epipactidis were the most frequently found bacterial species. Microbial incidence was high and did not change along the investigated urbanization gradient. However, microbial communities showed a nested subset structure, indicating that species-poor communities were a subset of species-rich communities. Conclusions: The level of urbanization was putatively identified as an important driver of nestedness, suggesting that environmental changes related to urbanization may impact microbial communities in floral nectar of plants growing in urban environments.
Figure 5 in Analysis of microbial diversity in the root of Astragalus mongholicus
Figure 5. Species richness at the genus level.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.