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501
datasets available to search
ShareScore release 0.7.1
Dataset results
501 results for “Phylogenetic tree”
MAST: Phylogenetic inference with mixtures across sites and trees (revised)
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The thermal niche and phylogenetic assembly of evergreen tree metacommunities in a mid-to-upper tropical montane zone
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Distribution dataset of the 140 Chinese mountain floras and dated phylogenetic tree
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The effect of neighbor species’ phylogenetic and trait difference on tree growth in subtropical forests
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Phylogenetic trees and sequences accession numbers list of the new species Viola evoluta
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Microbial communities of wild bees and comparative phylogenetics of key bacterial taxa across the bee tree of life
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The avian mycobiome: Phylogenetic trees and alignments for key fungal groups
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PhyloFusion- Fast and easy fusion of rooted phylogenetic trees into rooted phylogenetic networks
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Robust analysis of phylogenetic tree space
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Complex ecological phenotypes on phylogenetic trees: a Markov process model for comparative analysis of multivariate count data
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Data from: Geography and ecology shape the phylogenetic composition of Amazonian tree communities
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Cephalopod retinal development shows vertebrate-like mechanisms of neurogenesis: Multiple sequence alignments and phylogenetic trees
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Amino acid sequences of RWP-RK domain containing proteins used for the construction of phylogenetic tree shown in Fig. 1
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Original dataset, coded matrix, and Bayesian phylogenetic trees of three Late Ordovician brachiopod genera (Atrypida: Anazygidae)
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Data from: Phylogenetic conflict between species tree and maternally inherited gene trees in a clade of Emberiza buntings (Aves: Emberizidae)
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TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees
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Data from: Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction
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Sequence matrix and tree files for Spatial phylogenetics of the native California flora (Thornhill et al. BMC Biology)
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Online phylogenetics using parsimony produces slightly better trees and is dramatically more efficient for large SARS-CoV-2 phylogenies than de novo and maximum-likelihood approaches
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Phylogenetic comparative methods are problematic when applied to gene trees with speciation and duplication nodes: correcting for biases in testing the ortholog conjecture
<p>This repository contains “manuscript_dunn.RData” file, which is reproduced by using the files and scripts of Dunn et al. (Dunn CW, Zapata F, Munro C, Siebert S, Hejnol A (2018) Pairwise comparisons across species are problematic when analyzing functional genomic data. Proc Natl Acad Sci U S A 115: E409–E417. <a href="http://dx.doi.org/10.1073/pnas.1707515115">doi:10.1073/pnas.1707515115</a>).</p> <p>In this repository, we also supplied “Data_TMRR_latest.rda” file, containing the results generated by using our own scripts. Our scripts are available on GitHub: <a href="https://github.com/tbegum/Testing_the_ortholog_conjecture">https://github.com/tbegum/Testing_the_ortholog_conjecture</a>.</p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.