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175
datasets available to search
ShareScore release 0.9.0
Dataset results
175 results for “Single-molecule”
Raw data and analysis code of single-molecule analysis
<p>codes and raw data of single-molecule analysis</p>
Single-Molecule Sequencing: 5' End Reads - 5 bp away from TSS from Myeloma WT shCTRL
Open the record for dataset details and reuse information.
Single-Molecule Sensing inside Stereo- and Regio-Defined Hetero-Nanopores
<p>Source data for "Single-Molecule Sensing inside Stereo- and Regio-Defined Hetero-Nanopores"</p>
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing III
GEO Series GSE225311. Homo sapiens. 8 samples. Type: Other.
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing II
GEO Series GSE225310. Mus musculus. 8 samples. Type: Other.
Single-molecule chromatin configurations link transcription factor binding to expression in human cells [ChIP-seq]
GEO Series GSE276514. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Direct transposition of native DNA for sensitive multimodal single-molecule sequencing
GEO Series GSE225314. Homo sapiens; Mus musculus. 28 samples. Type: Other.
Single-molecule long-read methylation profiling reveals regional DNA methylation regulated by Elongator Complex Subunit 2 in Arabidopsis roots experiencing spaceflight
The Advanced Plant Experiment-04 - Epigenetic Expression (APEX-04-EpEx) experiment onboard the International Space Station examined the spaceflight-altered cytosine methylation in two genetic lines of Arabidopsis thaliana, wild-type Col-0 and the mutant elp2-5, which is deficient in an epigenetic regulator Elongator Complex Subunit 2 (ELP2). Whole-genome bisulfite sequencing (WGBS) revealed distinct spaceflight associated methylation differences, presenting the need to explore specific space-altered methylation at single-molecule resolution to associate specific changes over large regions of spaceflight related genes. To date, tools of multiplexed targeted DNA methylation sequencing remain limited for plant genomes. This data set includes single-molecule profiling in user-defined targets using Flap-Enabled Next-Generation Capture (FENGC) on Arabidopsis root tissues to reveal precise modification of DNA methylation regulated by Elongator Complex Subunit 2 during spaceflight.
Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing
GEO Series GSE184100. Arabidopsis thaliana. 6 samples. Type: Other; Methylation profiling by high throughput sequencing.
Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules [TRIBE_STAMP]
GEO Series GSE200712. Homo sapiens. 28 samples. Type: Other.
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications
GEO Series GSE253150. synthetic construct. 2 samples. Type: Other.
High-Throughput Single-Molecule R-loop Footprinting Reveals Principles of R-loop Formation
GEO Series GSE130726. Homo sapiens; Escherichia coli. 8 samples. Type: Other.
Single-molecule mapping of replisome progression
GEO Series GSE194025. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Methylation pseudotime analysis for label-free profiling of the temporal chromatin landscape with long-read and single-molecule resolution [Nanopore]
GEO Series GSE290978. Homo sapiens. 18 samples. Type: Other.
Single-molecule chromatin architectures of human centromeres and telomeres
GEO Series GSE186009. Homo sapiens. 2 samples. Type: Other.
Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules [Polysome]
GEO Series GSE201538. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing [BS-seq]
GEO Series GSE184099. Arabidopsis thaliana. 2 samples. Type: Methylation profiling by high throughput sequencing.
Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing [FLEP-seq]
GEO Series GSE178980. Arabidopsis thaliana. 4 samples. Type: Other.
Genome-wide single-molecule sequencing of 6-methyladenine in eukaryotes
GEO Series GSE68860. Chlamydomonas reinhardtii; Arabidopsis thaliana; Caenorhabditis elegans; Drosophila melanogaster; Nannochloropsis oceanica; Auricularia delicata; Saccharomyces cerevisiae. 11 samples. Type: Methylation profiling by high throughput sequencing; Third-party reanalysis.
Methylation pseudotime analysis for label-free profiling of the temporal chromatin landscape with long-read and single-molecule resolution
GEO Series GSE291013. Homo sapiens. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.