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281
datasets available to search
ShareScore release 0.9.0
Dataset results
281 results for “Whole brain”
Ribosome profiling and RNA-seq of Rat whole brain
GEO Series GSE173464. Rattus norvegicus. 15 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling of the whole mouse brain at 7 days post-natal age using transcriptome tomography
GEO Series GSE118177. Mus musculus. 22 samples. Type: Expression profiling by array.
Whole transcriptome profiles of different brain regions from a Chlorocebus sabaeus model of Parkinson's disease with and without human parthenogenetic stem cell derived neural stem cell transplantatio
GEO Series GSE78921. Chlorocebus sabaeus. 36 samples. Type: Expression profiling by high throughput sequencing.
Gene expression in the whole brains of two spontaneously hypertensive rat strains at 3 and 6 weeks of age
GEO Series GSE41452. Rattus norvegicus. 18 samples. Type: Expression profiling by array.
Whole genome bisulfite and TAB-Sequencing from sorted neurons in the adult mouse brain
GEO Series GSE84506. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.
Whole genome methylome and transcriptome study of tree shrew brains [BiSulfite-seq]
GEO Series GSE270314. Tupaia belangeri. 6 samples. Type: Methylation profiling by high throughput sequencing.
Gtf2i and Gtf2ird1 E13.5 whole brain ChIP-seq and RNA-seq
GEO Series GSE138234. Mus musculus. 50 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Gene expression profile at single cell level from the whole brain of two tree shrew fetus
GEO Series GSE233757. Tupaia belangeri. 2 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling of the whole mouse brain using transcriptome tomography
GEO Series GSE36408. Mus musculus. 61 samples. Type: Expression profiling by array.
RNA-SEQ profiling of mouse whole midbrain and dopaminergic neurons from the mouse mid-brain
GEO Series GSE64526. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Evaluation of Transcriptomic Change in Late-Delayed Radiation following Fractionated Whole Brain Irradiation and High Dose Total Body Irradiation in Non-Human Primates
GEO Series GSE120901. Macaca mulatta. 45 samples. Type: Expression profiling by high throughput sequencing.
A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanRef-8 v3.0]
GEO Series GSE38481. Homo sapiens. 37 samples. Type: Expression profiling by array.
Angiogenic Transformation in Human Brain Micro Endothelial Cells: Whole Genome DNA Methylation and Transcriptomic Analysis
GEO Series GSE140880. Homo sapiens. 12 samples. Type: Expression profiling by array.
Gene expression profiling of the whole mouse brain at 3 weeks of post-natal age using transcriptome tomography
GEO Series GSE118178. Mus musculus. 28 samples. Type: Expression profiling by array.
Whole brain transcriptomic analysis of Tbr1-K228E mutant mice
GEO Series GSE134526. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Seasonal changes of gene expression of whole brain in Medaka fish (Oryzias latipes) SC
GEO Series GSE124973. Oryzias latipes. 12 samples. Type: Expression profiling by array.
Whole Transcriptome RNA-seq in Brain Tissue of Young and Old Peromyscus maniculatus and P. leucopus
GEO Series GSE166394. Peromyscus maniculatus; Peromyscus leucopus. 24 samples. Type: Expression profiling by high throughput sequencing.
Whole brain transcriptome of wild-type or Nav1.8CreROSA26DTA mice upon LPS sepsis
GEO Series GSE173216. Mus musculus. 4 samples. Type: Expression profiling by array.
Gene expression profiling of the whole mouse brain at 3 days post-natal age using transcriptome tomography
GEO Series GSE118176. Mus musculus. 34 samples. Type: Expression profiling by array.
Whole-brain Neuron Reconstructions for Building Neuronal Connections at Multi-levels
<p>The dataset for construct connection networks of single neurons, including 1,877 neuron reconstructions, predicted bouton data, and 18,370 neurons. All neuronal morphologies were resampled with a spacing of 1 µm between consecutive points to ensure uniform reconstruction of the structures. The generated connectomes are also archived on the repository.</p> <p>1877-CELL_METADATA.xlsx: metadata of 1,877 neurons;</p> <p>SEU_1um.zip: 1,877 neuron reconstructions (full morphology);</p> <p>DEN-18370.zip: 1,877 neuron reconstructions (dendritic morphology);</p> <p>predicted_bouton_locations.zip: predicted bouton data (only coordinates and the corresponding neurons);</p> <p>jupyter tutorial: to generate connectivity matices of connectomes, and perform related analysis;</p> <p>arbor-net connections: arbor-net, single-neuron connectivity;</p> <p>bouton-net connections: bouton-net, single-neuron connectivity;</p> <p>all bouton from F1877: processed bouton locations, including their coordinates and brain regions;</p> <p>PACs from F1877: PACs from F1877 dataset, including coordinates, soma locations, and region of locations;</p> <p>SEU_net_w_corticalLayers and SEU_net_wo_corticalLayers: SEU-net brain region connectivity w or wo cortical layers.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.