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Figure 12d. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 12d. - Neoempheriapuncticoxa Edwards, 1940 prepupal larva.Figure 12a.Larva (pre-pupa), ventral view, hanging in its own silk in preparation for pupation. Substrate upside down.Figure 12b.Detail of larva (pre-pupa), ventral view, hanging in its own silk in preparation for pupation. Substrate upside down.Figure 12c.Larva (pre-pupa), frontal view, hanging in its own silk in preparation for pupation. Substrate upside down.Figure 12d.Detail of larva (pre-pupa), frontal view, hanging in its own silk in preparation for pupation. <br> Detail of larva (pre-pupa), frontal view, hanging in its own silk in preparation for pupation.
Figure 11b. from: The Pteridaceae family diversity in Togo - Biodiversity Data Journal 3: e5078 (15 July 2015) https://doi.org/10.3897/BDJ.3.e5078
Figure 11b. - DoryopteriskirkiiFigure 11a.General aspect of the fernFigure 11b.Shape of the laminaFigure 11c.Underside of a fertile frondFigure 11d.Details of sori <br> Shape of the lamina
Figure 10a. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 10a. - Neoempheriapuncticoxa Edwards, 1940 host fungus.Figure 10a.Sparassis sp., (Polyporales: Sparassidaceae) fruiting body that larvae of N.puncticoxa were found on in São Paulo.Figure 10b.Ventral view of fruiting body of Polyporaceae where larvae of N.puncticoxa were found in Goiás. <br> Sparassis sp., (Polyporales: Sparassidaceae) fruiting body that larvae of N.puncticoxa were found on in São Paulo.
Figure 8b. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 8b. - Neoempheriapuncticoxa Edwards, 1940 larval head capsule.Figure 8a.Ventral view.Figure 8b.Ventral view. <br> Ventral view.
Figure 9. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 9. - Neoempheriapuncticoxa Edwards, 1940 larval head capsule. Ventral view, without the mandible; e – eye; lb – labrum; lp – lateral plate; mp – maxillar papilla; mpl – medium plate; mx – maxilla; mxp – maxillary plate; of – occipital foramen; pmd – premandible.
Figure 8a. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 8a. - Neoempheriapuncticoxa Edwards, 1940 larval head capsule.Figure 8a.Ventral view.Figure 8b.Ventral view. <br> Ventral view.
Figure 5. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 5. - Neoempheriapuncticoxa Edwards, 1940 adult. Male thorax; Ab – abdomen, anp – anepisternum, bas - basisternum, cxI-III – fore-, mid-, and hindcoxae, ha – haltere, ktp – katepisternum, ltg – laterotergite, anp – anepimeron, mep – mesepimeron, mes – metepisternum, mtg – mediotergite, pem – proepimeron, pes – proepisternum, pnt – pronotum, sc – scutum, sctl – scutellum.
Figure 1b. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 1b. - Neoempheriapuncticoxa Edwards, 1940. Male adultFigure 1a.Dorsal view.Figure 1b.Ventral view. <br> Ventral view.
Supplementary material 12: Collector dashboard: specimens collected by Y. M. Marusik from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected by Y. M. Marusik. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 9: Integrated legacy literature and prospective publishing dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 8: Integrated legacy literature and prospective publishing dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Figure 7a. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 7a. - Neoempheriapuncticoxa Edwards, 1940 larval head capsule.Figure 7a.Ventrolateral view.Figure 7b.Ventrolateral view. <br> Ventrolateral view.
Supplementary material 5: Legacy literature dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 16: Author dashboard: Jeremy A. Miller from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing content from articles by Jeremy A. Miller (lead author). When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 4: Legacy literature dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 1: Global Biodiversity Information Facility: Taxa and Records from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
All records in GBIF with taxonomic ranks (kingdom, phylum, class, order, and species), basis of record (e.g., preserved specimen), and count of records, exported from GBIF on 7 December 2014.
Figure 12. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 12. - Excerpt from a taxonomic treatment with ambiguously structured materialsCitations data in the source document. The top frame shows the published PDF, the lower frame shows the same content in GoldenGATE with the treatment and materialsCitation tags revealed. The source document is ambiguous about how many paratype specimens are deposited in which natural history collection. This is represented in XML by associating the collection event data (place, time, collector) with each of the listed institutional collections but no quantity of specimens is assigned to any collection. The 110 male and 44 female specimens are also associated with the collection event data, but with no institutional collection.
Supplementary material 11: Collecting country dashboard: specimens collected in Russia from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected in Russia. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Figure 6. from: First record of Neoempheria Osten Sacken (Diptera, Mycetophilidae) biology in the Neotropical region, with associations between its larvae and fungi - Biodiversity Data Journal 3: e5073 (08 June 2015) https://doi.org/10.3897/BDJ.3.e5073
Figure 6. - Neoempheriapuncticoxa Edwards, 1940 adult. Male terminalia, A dorsal view; gcap – gonocoxal apodeme, gcx – gonocoxite, gs – gonostylus, par – parameres, B lateral view of the gonostylus, C Dorsal view of tergite 9, D Dorsal view of the cercus and sternite 10.
Figure 11. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 11. - Dashboard charts summarizing data published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only one lead author: Jeremy A. Miller (Suppl. material 16). Miller was lead author on two publications in Biodiversity Data Journal and one in Zootaxa, and was the only lead author on open access publications featuring spider treatments in both journals. Note that in addition to the three articles on which he is lead author, he is also a contributing author to a fourth article (Wang et al. 2010), but content from this article is not included here (see Discussion: Tracking individuals).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.