Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
PAXIP1 and STAG2 converge to maintain 3D genome architecture and facilitate promoter/enhancer contacts to enable stress hormone-dependent transcription [CRISPR_screen]
GEO Series GSE237953. Homo sapiens. 6 samples. Type: Other.
The genome-wide, multi-layered architecture of chromosome pairing in early Drosophila embryos
GEO Series GSE121255. Drosophila melanogaster. 2 samples. Type: Other.
Genomic architecture and evolution of a seasonal reaction norm
GEO Series GSE135523. Junonia coenia. 27 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [HiC]
GEO Series GSE141759. Plasmodium falciparum. 8 samples. Type: Other.
Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus. [ChIP-seq I]
GEO Series GSE147193. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The genomic architecture of sickle cell disease in children from West Africa
GEO Series GSE35007. Homo sapiens. 311 samples. Type: Expression profiling by array.
PML-RARa induces dynamic changes in genome architecture during leukemic transformation
GEO Series GSE151837. Mus musculus. 51 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Genomic architecture of biomass heterosis in Arabidopsis
GEO Series GSE85759. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
A Top2 and Hmo1-mediated genome architectural pathway preventing chromosome fragility.
GEO Series GSE16258. Saccharomyces cerevisiae. 22 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus. [RNA-seq]
GEO Series GSE147278. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 2]
GEO Series GSE104098. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome
GEO Series GSE5373. Homo sapiens. 592 samples. Type: Genome variation profiling by genome tiling array.
Rapid depletion of the cohesin subunits and CTCF reveals their role in maintaining high-order genome architecture [RNA-seq]
GEO Series GSE181849. Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing.
HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [HM-ChIP]
GEO Series GSE141760. Plasmodium falciparum. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Active maintenance of CD8+ T cell naïvety through regulation of global genome architecture [Hi-C]
GEO Series GSE225860. Mus musculus. 15 samples. Type: Other.
Reorganization of 3D chromatin architecture of rice genomes during heat stress (RNA-Seq)
GEO Series GSE144566. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Chromatin Loops Associated with Active Genes and Heterochromatin Shape Rice Genome Architecture for Transcriptional Regulation
GEO Series GSE131202. Oryza sativa Indica Group. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SATB2 organizes the 3D genome architecture of cognition in cortical neurons [RNA-Seq]
GEO Series GSE244285. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat Hi-ChIP)
GEO Series GSE133883. Triticum aestivum. 2 samples. Type: Other.
Reorganization of 3D chromatin architecture of rice genomes during heat stress (ATAC-Seq)
GEO Series GSE144564. Oryza sativa. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.