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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
Chromosome-level organization of the regulatory genome in the Drosophila nervous system
GEO Series GSE214707. Drosophila virilis; Drosophila melanogaster. 34 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Elementary 3D organization of active and silenced E. coli genome (RNA-Seq)
GEO Series GSE283264. Escherichia coli. 25 samples. Type: Expression profiling by high throughput sequencing.
Nuclear Lamins are Not Required for Genome Organization in Mouse Embryonic Stem Cells [DamID]
GEO Series GSE62683. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Dynamic genome-wide interaction patterns elucidate the roles of Ki67 in chromatin organization
GEO Series GSE186206. Homo sapiens. 213 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Changes in 3D genome organization of hepatocellular carcinoma (HCC) cells induced by lipid overload
GEO Series GSE273061. Homo sapiens. 2 samples. Type: Other.
3D structures of individual mammalian genomes reveal principles of nuclear organization
GEO Series GSE80280. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
High Throughput Chromosome Conformation Capture identifies differential genome organization in virulent and avirulent strains of Mycobacterium tuberculosis
GEO Series GSE218775. Mycobacterium tuberculosis H37Rv; Mycobacterium tuberculosis H37Ra. 6 samples. Type: Other.
Deterioration of multi-level 3D genome organization during breast cancer progression
GEO Series GSE246599. Homo sapiens. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function.
GEO Series GSE296389. Homo sapiens. 28 samples. Type: Other.
The role of condensin II in genome organization
GEO Series GSE80075. Homo sapiens; Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
The effect of trisomic chromosomes on spatial genome organization and global transcription in embryonic stem cells
GEO Series GSE179435. Mus musculus. 29 samples. Type: Other; Expression profiling by high throughput sequencing.
The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome
GEO Series GSE13622. Homo sapiens; Mus musculus; synthetic construct; Saccharomyces cerevisiae. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array.
Correlated alterations in genome organization, histone methylation, and DNA-lamina interactions in Hutchinson-Gilford progeria syndrome
GEO Series GSE41764. Homo sapiens. 28 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [RNASeq_T8]
GEO Series GSE227749. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Nuclear Lamins are Not Required for Genome Organization in Mouse Embryonic Stem Cells [RNA-Seq]
GEO Series GSE62684. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A primary hierarchically organized patient-derived model enables in depth interrogation of stemness driven by the coding and non-coding genome [WGS]
GEO Series GSE211499. Homo sapiens. 4 samples. Type: Genome variation profiling by high throughput sequencing.
Deterioration of multi-level 3D genome organization during breast cancer progression
GEO Series GSE246947. Homo sapiens. 6 samples. Type: Other.
Whole genome transcriptomics of upper extremity veins from end-stage kidney disease patients and non-kidney disease organ donors
GEO Series GSE233264. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing.
Architectural protein subclasses shape 3-D organization of genomes during lineage commitment
GEO Series GSE36203. Mus musculus. 7 samples. Type: Genome variation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome structure and organization in mouse CD8 T cells
GEO Series GSE85560. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.