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Fig. 2 in Interaction of Ciliate Communities with Cyanobacterial Water Bloom in a Shallow, Hypertrophic Reservoir
Fig. 2. Similarity of ciliate communities at five study spots from the Modra reservoir. a. Hierarchical cluster analysis (complete linkage method and Wishart's index). Vertical axis represents the scale of dissimilarity. b. PCA ordination diagram. Eigenvalues of two first axes are λ 1 = 0.759 and λ 2 = 0.193, accounting for 95.1% of the total variation. BE – benthic east study spot; BN – benthic north study spot; BS – benthic south study spot; BW – benthic west study spot; P – plankton.
Fig. 1 in Interaction of Ciliate Communities with Cyanobacterial Water Bloom in a Shallow, Hypertrophic Reservoir
Fig. 1. Changes of selected parameters in the Modra water reservoir during the period between September 2013 and October 2014. a. Course of water bloom development. b. Changes in diversity and equitability of ciliate communities. c. Changes in abundances and numbers of ciliate species in the benthos. d. Changes in abundances and numbers of ciliate species in the plankton. e. Changes in saprobic index as indicated by ciliate communities. f. Changes in proportions of saprobity levels as indicated by ciliate communities.
Fig. 4 in Interaction of Ciliate Communities with Cyanobacterial Water Bloom in a Shallow, Hypertrophic Reservoir
Fig. 4. Association networks based on time-shifted local similarity analysis (eLSA). Edges denote statistically significant connections (p <0.05). Solid lines represent positive correlations, while dashed lines negative associations. Arrows point to the parameters that were delayed.
Figure S2 in Assessing structure and seasonal variations of a temperate shallow water fish assemblage through Snorkel Visual Census
Figure S2. – Diel variation in observation frequency of individual species. Gobiusculus flavescens and S. melops were both more frequent at daytime, while A. anguilla, M. scorpius, S. trutta, G. morhua, C. harengus and T.bubalis were, all more frequently encountered at night.
Figure S1 in Assessing structure and seasonal variations of a temperate shallow water fish assemblage through Snorkel Visual Census
Figure S1. – Diel variations in assemblage structure was significant (X2 P <0.05). Demersal fishes are most abundant at day, while benthic fishes are dominant at night. Abundance of pelagic fishes increase at night.
Figure 2. – Monthly average species richness observed during diurnal counts from June 2013 in Assessing structure and seasonal variations of a temperate shallow water fish assemblage through Snorkel Visual Census
Figure 2. – Monthly average species richness observed during diurnal counts from June 2013 to August 2014. Error bars represent ±SD. Number of counts per month are, indicated at column bases.
Figure 3 in Assessing structure and seasonal variations of a temperate shallow water fish assemblage through Snorkel Visual Census
Figure 3. – Correlation between temperature and species richness compared between diurnal and nocturnal counts. Dotted trendlines show the quadratic and linear relationships between species richness and temperature at diurnal and nocturnal counts respectively.
FIGURE 12 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 12. Relative abundance of Paracentrotus lividus spine remains. A, Is Mesas (Pleistocene-Bulk sample). B, Sa Mesa Longa Beach (Recent-Surface collection). C, Sa Mesa Longa Beach (Bulk sample). N = number of counted specimens.
FIGURE 13 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 13. Biostratinomic signatures (abrasion and encrustation) of spine remains. A, Is Mesas (Pleistocene-Bulk sample). B, Sa Mesa Longa Beach (RecentSurface collection). C, Sa Mesa Longa Beach (RecentBulk sample). N = number of counted specimens
FIGURE 11 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 11. Distribution of ambulacral and interambulacral plates in the two sediment fractions (> 2 mm and 1-2 mm) investigated herein. N = number of counted specimens.
FIGURE 9 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 9. Relative abundance of Paracentrotus lividus test remains. A, Is Mesas (Pleistocene-Bulk sample). B, Sa Mesa Longa Beach (Recent-Surface collection). C, Sa Mesa Longa Beach (Bulk sample). N = number of counted specimens.
FIGURE 10 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 10. Biostratinomic signatures (fragmentation, abrasion and encrustation) of echinoid test remains. A, Is Mesas (Pleistocene-Bulk sample). B, Sa Mesa Longa Beach (Recent-Surface collection). C, Sa Mesa Longa Beach (Recent-Bulk sample). N = number of counted specimens. Numbers (1-11) are explained in Figure 9. Colors: dark grey, light grey and black represent fragmentation, abrasion and encrustation, respectively.
FIGURE 6. A in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 6. A, Panoramic view of Sa Mesa Longa Beach (Central-western Sardinia). B-H, Recent remains of Paracentrotus lividus from Sa Mesa Longa. B, Complete denuded test showing encrustation by serpulids. C, Test fragment made up of several ambulacral and interambulacral plates sutured together, showing inter- and intraplate fragmentation and encrustation by coralline algae and the polychaete Spirorbis. D, Internal view of a large test fragment affected by intraplate fragmentation and encrustation by serpulid worms. E, Two interambulacral plates showing abrasion and encrustation by Spirorbis. F, Single ambulacral plates showing fragmentation (white arrow). G, Epiphysis from the jaw apparatus showing fragmentation and abrasion. H, Madreporite from the apical system affected by fragmentation (white arrow). I, Test fragment of Arbacia lixula showing intraplate fracturing. J, Complete test of Echinocyamus pusillus. B, C, D, I, J Scale bar equals 1 cm. E–H scale bars equal 0.5 cm.
FIGURE 7 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 7. Scanning electron micrographs of suture faces in recent Paracentrotus lividus. A, Interradial suture between interambulacral plates showing galleried stereom with galleries running in aboral-oral direction. A1, Detail of the galleried stereom and collagen fibers. B, Adradial suture of interambulacral plates showing galleried stereom. B1, Detail of the parallel galleries and collagen fibers. C, Adapical suture of an interambulacral plates showing knob-like trabecular protrusions and cavities. C1, The close-up shows numerous knob-like protrusions some of which are interconnected to one another in twos, threes or more. D, Adoral suture of ambulacral plates; 1) Radial ridge at the boundary between ambulacral plates (running across perradial sutures) and 2) galleried stereom. A, B, C Scale bars equal 100 µm; A1, B1, C1 Scale bars equal 20 µm. D Scale bar equals 1 mm.
FIGURE 8 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 8. Size-frequency distribution of the rotulae of the Aristotle's lantern both in Pleistocene deposit and recent setting. Each box-plot represents 25 and 75 percent quartile of all values, Q1 and Q3 respectively. Black line inside the box represents the median. Whiskers are drawn from Q1 and Q3 to the largest values less than 1.5 times the Interquartile range (Q1-Q3). N = number of counted specimens.
FIGURE 4. Associated fauna from levels A and B in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 4. Associated fauna from levels A and B of the Is Mesas deposit (Late Pleistocene). A, Patella caerulea. B, Diodora gibberula. C, Cerithium vulgatum. D, Hexaplex trunculus. E, Melarhaphe neritoides. F, Acanthocardia tuberculata. G, Irus irus. H, Arca noae. I, Cardita calyculata. J, Cladocora caespitosa. Scale bars equal 1 cm.
FIGURE 5 in Tracking biases in the regular echinoid fossil record: The case of Paracentrotus lividus in recent and fossil shallow-water, high-energy environments
FIGURE 5. Scanning electron micrographs of Paracentrotus remains from Is Mesas. A, Details of an ambulacral column affected by abrasion. B, Two ambulacral plates still sutured together. C, Interambulacral plate showing a cavity possibly related to bioerosion. D, Spine fragment showing fine surface details such as the crenulated milled ring and shaft striation. Scale bars equal 1 mm.
Figure 4. A cove with shallow water near Ponte Porton with 14 in Populations of Microcondylaea bonellii (Férussac 1827), Unionidae - an european freshwater mussel at rapid decline - and Unio mancus in Istria, Croatia
Figure 4. A cove with shallow water near Ponte Porton with 14 individuals of Microcondylaea bonellii (26.9.2009).
FIG. 26 in Triphoridae (Gastropoda) from Martinique sampled by the MADIBENTHOS expedition, with notes on shallow-water species from Guadeloupe
FIG. 26. — Proportion of triphorid species sampled by MADIBENTHOS, according to depth zones and total number of shells/specimens (n).
FIG. 23. — A in Triphoridae (Gastropoda) from Martinique sampled by the MADIBENTHOS expedition, with notes on shallow-water species from Guadeloupe
FIG. 23. — A, Geographic range of triphorids from Martinique, whether endemic vs present in other sites in Lesser Antilles or beyond in the Northwest or West Atlantic; B, total shallow-water triphorids recorded in each well-sampled locality, including the number of shared species with Martinique; references from Brazil are those of M. Fernandes and colleagues, from Cuba those of E. Rolán (or J. Espinosa) and colleagues, from Aruba, Bonaire and Curaçao (ABC Is.) are De Jong & Coomans (1988), Moolenbeek & Faber (1989), Faber & Moolenbeek (1991) and Faber (2010), and Redfern (2013) from Abaco, Bahamas; C, number of triphorid species per geographic zone; D, number of triphorid species per Caribbean or Atlantic side in Martinique; E, F, nMDS of geographic and bathymetric zones regarding triphorid species, based on Bray-Curtis (E) and Jaccard (F) indexes: dark green, Nord Atlantique; light green, Sud Atlantique; dark blue, Nord Caraibe; light blue, Sud Caraibe; red, Baie de Fort-de-France; dots, 0-10 m; squares, 11-20 m; triangles, 21-30 m; X, 31-60 m; + - 61-85 m.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.