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4,144 results for “ITS barcode”
Supplementary material 8 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
ML tree based on 1,292 sequences of Neotropical mosquitoes: Explanation note: Original Maximum likelihood tree of the barcoding sequences of mosquito species listed for the Neotropics (.tre).
Supplementary material 1 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
Mosquito specimens collected in the present study: Explanation note: Full collection site details, including geo-references and environmental conditions, of the mosquito taxa identified in this study.
Supplementary material 7 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
ML tree based on 1,292 sequences of Neotropical mosquitoes: Explanation note: Original Maximum likelihood tree of the barcoding sequences of mosquito species listed for the Neotropics.
Supplementary material 4 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
Outgroup taxa used in the present study: Explanation note: Outgroup taxa used in the present study. Sequences downloaded from BOLD between December 2013 and February 2014.
Supplementary material 3 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
Mosquito specimens collected in Uraba during 2009 (unpublish data): Explanation note: Additional sequences of mosquitoes collected in rural areas of Uraba (Antioquia, Colombia) during 2009, including sampling information.
Supplementary material 5 from: Rozo-Lopez P, Mengual X (2015) Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology. ZooKeys 513: 39-64. https://doi.org/10.3897/zookeys.513.9561
NJ tree based on 1,292 sequences of Neotropical mosquitoes: Explanation note: Original Neighbour-Joining tree of the barcoding sequences of mosquito species listed for the Neotropics, based on Tamura-Nei genetic distances.
Supplementary material 1 from: Huemer P, Mutanen M (2015) Alpha taxonomy of the genus Kessleria Nowicki, 1864, revisited in light of DNA-barcoding (Lepidoptera, Yponomeutidae). ZooKeys 503: 89-133. https://doi.org/10.3897/zookeys.503.9590
Sample information for specimens used in this study.: Explanation note: Details of collecting data, images, sequences, and trace files for the barcoded specimens are available in the public BOLD dataset "DS-LEAKE", accessed at https://doi.org/10.5883/DS-LEAKE
Supplementary material 7 from: Tedersoo L, Anslan S, Bahram M, Põlme S, Riit T, Liiv I, Kõljalg U, Kisand V, Nilsson RH, Hildebrand F, Bork P, Abarenkov K (2015) Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10: 1-43. https://doi.org/10.3897/mycokeys.10.4852
Table S7. Taxonomic classification of the rDNA of fungal.: Explanation note: Taxonomic classification of the rDNA of fungal shotgun metagenome.
Supplementary material 3 from: Tedersoo L, Anslan S, Bahram M, Põlme S, Riit T, Liiv I, Kõljalg U, Kisand V, Nilsson RH, Hildebrand F, Bork P, Abarenkov K (2015) Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10: 1-43. https://doi.org/10.3897/mycokeys.10.4852
Table S3. Data set of the SSU V4 and V5 barcodes.: Explanation note: Data set of the SSU V4 and V5 barcodes.
Supplementary material 1 from: Tedersoo L, Anslan S, Bahram M, Põlme S, Riit T, Liiv I, Kõljalg U, Kisand V, Nilsson RH, Hildebrand F, Bork P, Abarenkov K (2015) Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10: 1-43. https://doi.org/10.3897/mycokeys.10.4852
Table S1. Characteristics of soil samples.: Explanation note: Characteristics of soil samples used in this study.
Supplementary material 6 from: Tedersoo L, Anslan S, Bahram M, Põlme S, Riit T, Liiv I, Kõljalg U, Kisand V, Nilsson RH, Hildebrand F, Bork P, Abarenkov K (2015) Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10: 1-43. https://doi.org/10.3897/mycokeys.10.4852
Table S6. Data set of the LSU D1, D2, and D3 barcodes.: Explanation note: Data set of the LSU D1, D2, and D3 barcodes.
Supplementary material 1 from: Garcia-Robledo C, Staines CL, Kress WJ (2015) A new species of bromeliad-feeding Cephaloleia Chevrolat (Coleoptera, Chrysomelidae, Cassidinae) from Costa Rica: evidence from DNA barcodes, larval and adult morphology and insect diets. ZooKeys 477: 143-155. https://doi.org/10.3897/zookeys.477.8220
DNA barcodes (COI) for specimens of Cephaloleia histrionica and Cephaloleia kuprewiczae included in this study.: Explanation note: Single-line descriptions for each sequence include: Collection number, Cephaloleia species, host plant species, elevation and locality. DNA sequences from type specimens include the tag genseq-1 in the description line.
Supplementary material 2 from: Tedersoo L, Anslan S, Bahram M, Põlme S, Riit T, Liiv I, Kõljalg U, Kisand V, Nilsson RH, Hildebrand F, Bork P, Abarenkov K (2015) Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi. MycoKeys 10: 1-43. https://doi.org/10.3897/mycokeys.10.4852
Table S2. Taxonomic composition and clustering of the mock community sample.: Explanation note: Taxonomic composition and clustering of the mock community sample.
Supplementary material 1 from: Huemer P, Karsholt O, Mutanen M (2014) DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae). ZooKeys 404: 91-111. https://doi.org/10.3897/zookeys.404.7234
Sample information for specimens included in this study.: Explanation note: Process IDs are sequence identifiers in BOLD; Sample IDs are specimen identifiers; BINs are Barcode Identification Numbers in BOLD. Details of collecting data, images, sequences, and trace files for the barcoded specimens are available in the public BOLD dataset "DS-LECARY", accessed at dx.doi.org/10.5883/DS-LECARY.
FIGURES 1–8 in DNA barcoding and morphological data reveal a new Hyposoter (Hymenoptera: Ichneumonidae: Porizontinae) reared from a rare zygaenid moth Artona flavipuncta Hampson, 1900 in Taiwan
FIGURES 1–8. Male of Hyposoter distriangulum sp. nov. 1, Front view of head (scale bar = 1 mm); 2, Mandibles, maxillary and labial palpUs (scale bar = 300 µm); 3, Close view of mandibles (scale bar = 200 µm); 4, Scape and pedicel of antanna (scale bar = 300 µm); 5, Dorsal-lateral view of mesosoma with right wings removed (scale bar = 1 mm); 6, TarsUs and tibial spUr of fore leg (scale bar = 500 µm); 7, Fore leg claws (scale bar = 300 µm); 8, Coxae of median and hind legs (scale bar = 1 mm).
FIGURES 21–27 in DNA barcoding and morphological data reveal a new Hyposoter (Hymenoptera: Ichneumonidae: Porizontinae) reared from a rare zygaenid moth Artona flavipuncta Hampson, 1900 in Taiwan
FIGURES 21–27. Hyposoter distriangulum sp. nov. and its host Artona flavipuncta 21, Holotype (scale bar = 5 mm); 22, Dorsal view of head (scale bar = 1 mm); 23, Fore wing (scale bar = 2 mm); 24, Dorsal view of cocoon (scale bar = 1 cm); 25, Lateral view of cocoon (scale bar = 1 cm); 26, Larvae of Artona flavipuncta on the leaf of Zingiber kawagoii, with the one in the middle parasitized by H. distriangulum sp. nov.; 27, Cocoon of H. distriangulum sp. nov. on the leaf of Z. kawagoii.
FIGURES 17–20 in DNA barcoding and morphological data reveal a new Hyposoter (Hymenoptera: Ichneumonidae: Porizontinae) reared from a rare zygaenid moth Artona flavipuncta Hampson, 1900 in Taiwan
FIGURES 17–20. Female of Hyposoter distriangulum sp. nov. 17, Lateral view of head and mesosoma (scale bar = 1 mm); 18, Lateral view of abdomen (scale bar = 2 mm); 19, Ovipositor (scale bar = 500 µm); 20, Ovipositor sheaths (scale bar = 500 µm).
FIGURES 9–16 in DNA barcoding and morphological data reveal a new Hyposoter (Hymenoptera: Ichneumonidae: Porizontinae) reared from a rare zygaenid moth Artona flavipuncta Hampson, 1900 in Taiwan
FIGURES 9–16. Male of Hyposoter distriangulum sp. nov. 9, TarsUs of median leg (scale bar = 1 mm); 10, Tibial spUr of median leg (scale bar = 500 µm); 11, Median leg claw (scale bar = 200 µm); 12, Lateral view of abdomen (scale bar = 1 mm); 13, Lateral view of first to third tergites (scale bar = 1 mm); 14, First tergite and apical area of propodeUm (scale bar = 500 µm); 15, Lateral view of seventh tergite and gonoforceps (scale bar = 500 µm); 16, Close view of gonoforceps (scale bar = 200 µm).
Fig. 6 in Identification of the polyp stage of three leptomedusa species using DNA barcoding
Fig. 6. Racemoramus panicula (G. O. Sars, 1874), sample MHNG-INVE-48748 from Korsfjord after DNA extraction, schematic drawing of part of main stem and some side-branches (some broken off).
Fig. 5 in Identification of the polyp stage of three leptomedusa species using DNA barcoding
Fig. 5. Earleria quadrata (Hosia & Pages, 2007), living medusa from Korsfjord, one individual in a catch of four used to obtain DNA isolate 1162.
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Allen Brain Atlas
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International Brain Laboratory public data
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OpenNeuro
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