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tascCODA - supplemental data
<p>Supplemental data for "tascCODA: Bayesian tree-aggregated analysis of compositional amplicon and single-cell data" (Ostner et al., 2021)).</p> <p>Instructions for use at https://github.com/bio-datascience/tascCODA_reproducibility</p>
FIGURE 9 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 9. Trophomera sp., male. A, B, cephalic end; C, posterior end; D, spicula. Abbreviations: l.a = lateral ala; a = amphid; v.d = vas deferens.
FIGURE 5 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 5. Trophomera minutissima sp. n., female, holotype. A, total view; B, genital system; C, cephalic end, lateral view; D, posterior end. Abbreviation: a = amphid.
FIGURE 2. Bathynema nodinauti gen. n in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 2. Bathynema nodinauti gen. n. sp. n., male, holotype. A, anterior end, lateral view; B, anterior end laterally, surface view; C, anterior end, frontal view; D, posterior end; E, spicula.
FIGURE 12 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 12. Main types of Trophomera female reproductive systems. A, two testes directed anterior; B, testes arranged consecutively in tandem and connected by joint spermaduct, posterior testis having a small caecum directed anterior; C, testes arranged consecutively in tandem and connected by joint spermaduct; D, testes arranged consecutively in tandem and connected by joint shortened spermaduct; E, testes almost merged; F, testes merged in one long testis. From Miljutin (2004).
FIGURE 3 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 3. Trophomera elegantis sp. n., female, holotype. A, total view; B,C, cephalic end, lateral view; D, female genital system; E, posterior end. Abbreviation: t = trophosoma.
FIGURE 6 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 6. Trophomera pacifica sp. n., female, holotype. A, total view; B, cephalic end, lateral view; C, anterior part of cephalic end laterally, surface view; D, posterior end (some small, hardly visible lateromedian, somatic sensilla pointed to by arrows). Abbreviation: a = amphidial aperture.
FIGURE 7 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 7. Trophomera pacifica sp. n., female, holotype. A, anterior ovary; B, vulva region; C, posterior ovary. Some small, hardly visible lateromedian, somatic sensilla are pointed to by arrows.
FIGURE 4 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 4. Trophomera marionensis (Petter 1983b), female. A, cephalic end; B, posterior end. Abbreviations: n.r = nerve ring; t = trophosome.
FIGURE 11 in Description of Bathynema nodinauti gen. n., sp. n. and four new Trophomera species (Nematoda: Benthimermithidae) from the Clarion-Clipperton Fracture Zone (Eastern Tropic Pacific), supplemented with the keys to genera and species*
FIGURE 11. Main types of shapes of posterior ends occuring in Trophomera species. 1a, rounded tail; 1b, rounded tail with terminal spine; 1c, rounded tail with terminal spine possesing additional cuticular layers and granular inclusions; 1d, rounded tail with abnormal terminal spine; 1e, rounded tail with small terminal knob; 2a, tail in shape of rounded cone; 2b, cone-shaped tail; 2c, cone-shaped tail with attenuatous tip; 2d, cone-shaped tail with terminal spine.
supplement videos of Solution for Mass Production of High-Throughput Digital Microfluidic Chip Based on Thin Film Transistor Technology
<p>supplement videos of Solution for Mass Production of High-Throughput Digital Microfluidic Chip Based on Thin Film Transistor Technology</p>
Figs 3–4 in Studies on the systematics and taxonomy of the genus Hylaeus F. (9) Supplement to the taxonomy and distribution of Afrotropical Hylaeus F. species (Hymenoptera: Anthophila, Colletidae)
Figs 3–4: Hylaeus (Alfkenylaeus) euphorbiae spec. nov., typus male: 3 head in frontal view, 4 surface
Figs 5–8 in Studies on the systematics and taxonomy of the genus Hylaeus F. (9) Supplement to the taxonomy and distribution of Afrotropical Hylaeus F. species (Hymenoptera: Anthophila, Colletidae)
Figs 5–8: Hylaeus (Cornylaeus) adamauanis spec. nov.: head in frontal view and surface structure of basal terga in dorsal view. – 5, 6 Typus male. – 7, 8 Paratypus female. – Scale 1 mm.
Figs 1–2 in Studies on the systematics and taxonomy of the genus Hylaeus F. (9) Supplement to the taxonomy and distribution of Afrotropical Hylaeus F. species (Hymenoptera: Anthophila, Colletidae)
Figs 1–2: Hylaeus (Alfkenylaeus) acariphorus SNELLING, 1985. Male (left) and female of red variant; specimens from Kenya, Tsavo National Park East. – Scale 2 mm.
Figs 18–21 in Studies on the systematics and taxonomy of the genus Hylaeus F. (9) Supplement to the taxonomy and distribution of Afrotropical Hylaeus F. species (Hymenoptera: Anthophila, Colletidae)
Figs 18–21: Hylaeus (Pumilaeus) pumilus spec. nov.: head in frontal view and surface structure of basal
FIGURE 6 in Rediscovery of Styrax buchananii and S. chrysocarpus, with supplemental descriptions adding fruit and floral characters, respectively
FIGURE 6. Styrax chrysocarpus from Malipo County, Yunnan, China. A. Leaf blades in adaxial (left) and abaxial (right) view. B. Flower (apical view). C. Flower (lateral view). D. Calyx (lateral view). E. Stamen (lateral view). F. Ovary and style. G. Fruit (lateral view). H. Seed (lateral view). Note: a, d, g show the indumentum on the abaxial surface of the leaf blade, calyx and pericarp, respectively. All photographs by R. Zhang except B, C, E and F by X.X. Zhu.
FIGURE 5 in Rediscovery of Styrax buchananii and S. chrysocarpus, with supplemental descriptions adding fruit and floral characters, respectively
FIGURE 5. Styrax chrysocarpus from Malipo County, Yunnan, China. A. Habit. B. Flowering branchlet. C. Fruiting branchlet. A and C from R. Zhang et al. zrr2 (JXAU), B from E.D. Liu et al. LiuED6087 (KUN). Photographs A and C by R. Zhang, and B by X.X. Zhu.
FIGURE 3 in Rediscovery of Styrax buchananii and S. chrysocarpus, with supplemental descriptions adding fruit and floral characters, respectively
FIGURE 3. Styrax buchananii from Yingjiang County, Yunnan, China. A. Habit, the arrow shows S. buchananii. B. Flowering branchlet. C. Fruiting branchlets. A and C from R. Zhang et al. zrr14 (JXAU), B from W.Y. Zhao & F. Ye zwy-1606 (JXAU). Photographs A and C by R. Zhang, and B by W.Y. Zhao.
FIGURE 4 in Rediscovery of Styrax buchananii and S. chrysocarpus, with supplemental descriptions adding fruit and floral characters, respectively
FIGURE 4. Styrax buchananii from Yingjiang County, Yunnan, China. A. Leaf blades in adaxial (left) and abaxial (right) view. B. Flower (lateral view). C. Flower (lateral view). D. Calyx (lateral view). E. Stamen (lateral view). F. Fruit (lateral view). G. Fruit cut longitudinally to show thick pericarp. H. Seed (lateral view). a, d, f show indumentum on the abaxial surface of leaf blade, calyx and pericarp, respectively. All photographs by R. Zhang except B, C and E by W. Y. Zhao.
FIGURE 2 in Rediscovery of Styrax buchananii and S. chrysocarpus, with supplemental descriptions adding fruit and floral characters, respectively
FIGURE 2. Specimens of Styrax buchananii (A, C) and S. chrysocarpus (B, D). A. China, Yunnan, Yingjiang County, W.Y. Zhao & F. Ye zwy-1608 (SYS). B. China, Yunnan, Malipo County, E.D. Liu et al. LiuED6087 (KUN). C. China, Yunnan, Yingjiang County, R. Zhang et al. zrr14 (JXAU). D. China, Yunnan, Malipo County, R. Zhang et al. zrr2 (JXAU).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.