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Fig. 7 in Transcriptome sequencing of the apricot (Prunus armeniaca L.) and identification of differentially expressed genes involved in drought stress

Fig. 7. Effects of control and drought stress on leaf microstructure of apricot. a, c, e, represent the leaf stomata, vertical section, and cuticle in the control group, respectively. b, d, f, represent the leaf stomata, vertical section, and cuticle in the drought stress group, respectively.

Fig. 4 in Transcriptome sequencing of the apricot (Prunus armeniaca L.) and identification of differentially expressed genes involved in drought stress

Fig. 4. KEGG enrichment of annotated DEGs in Treat versus Control. The Y-axis shows the KEGG pathway and the X-axis shows the Rich factor. This q value goes from purple to red, which means from 1 to 0. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)

Fig. 3 in Transcriptome sequencing of the apricot (Prunus armeniaca L.) and identification of differentially expressed genes involved in drought stress

Fig. 3. GO classifications of DEGs for Treat versus Control. The Y-axis represents the number of DEGs in a category. The BP, CC and MF represent biological process, cellular component and molecular function respectively.

Fig. 5. SSR motifs distribution. The X in Transcriptome sequencing of the apricot (Prunus armeniaca L.) and identification of differentially expressed genes involved in drought stress

Fig. 5. SSR motifs distribution. The X-axis is SSR type, the Y-axis value is the coordinate, the specific number of repetitions should correspond to the legend according to the color, and the Z-axis is the number of SSR. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)

Fig. 1 in Transcriptome sequencing of the apricot (Prunus armeniaca L.) and identification of differentially expressed genes involved in drought stress

Fig. 1. Gene Function Classification of the assembled unigenes. Unigenes with BLAST hits were classified into three major categories and 56 sub-categories in GO. The Y-axis shows the number of genes in each sub-category.

Fig. 4 in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 4. Antioxidant enzymes in rhizomes of two licorice populations grown under salt stress in the greenhouse. SOD (A) and APX (B). Vertical bars indicate the standard error of the mean (n = 3). Means followed by the same letter are not significantly different (p <0.05) by LSMeans Student's t (n = 3).

Fig. 5 in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 5. Expression profile of genes bAS (A), CYP88D6 (B) and CYP2A154 (C) involved in the synthesis of glycyrrhizin in rhizomes of two licorice populations grown under salt stress in greenhouse, using real-time PCR. Vertical bars indicate the standard error of the mean (n = 3). Means followed by the same letter are not significantly different (p <0.05) by LSMeans Student's t (n = 3).

Fig. 3 in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 3. Oxidative damage in the rhizomes of two licorice populations grown under salt stress in greenhouse. MDA (A) and H2O2 (B). Vertical bars indicate the standard error of the mean (n = 3). Means followed by the same letter are not significantly different (p <0.05) by LSMeans Student's t (n = 3).

Fig. 1. K in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 1. K+/Na+ ratio in rhizomes of two licorice populations grown under salt stress in greenhouse. Vertical bars indicate the standard error of the mean (n = 3). Means followed by the same letter are not significantly different (p <0.05) by LSMeans Student's t (n = 3).

Fig. 7 in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 7. HPLC chromatograms of standard solution (glycyrrhizin, 0.25 mg/ml) at 254 nm (A) and a licorice sample (B).

Fig. 6 in Salinity effects on physiological and phytochemical characteristics and gene expression of two Glycyrrhiza glabra L. populations

Fig. 6. Glycyrrhizin content in rhizomes of two licorice populations grown under salt stress in greenhouse. Data are means ± S.E. (n = 3). Vertical bars indicate the standard error of the mean (n = 3). Means followed by the same letter are not significantly different (p <0.05) by LSMeans Student's t (n = 3).

Fig. 5. A in Differential expression after UV-B radiation and characterization of chalcone synthase from the Patagonian hairgrass Deschampsia antarctica

Fig. 5. A) Structural alignment between DaCHS (red) and crystal 4YJY (cyan). The RMSD value was 0.25 Å. B) Molecular dynamics simulation analysis. The MDS was carried out using NAMD software and the trajectory analysis was carried out by using VMD software. C) Proteins' structural stability in the function of RMSD, during 2 ns of MDS. RMSF plots of DaCHS (red) and 4YJY chain A (blue) during MD simulation are compared. The greatest fluctuations are found in the loops region of proteins.

Fig. 1 in Differential expression after UV-B radiation and characterization of chalcone synthase from the Patagonian hairgrass Deschampsia antarctica

Fig. 1. Multiple alignment of amino acids for monocotyledons sequences: H. vulgare HvCHS1 (ID: P26018.1), H. vulgare HvCHS2 (ID: Q96562.1), O. sativa subsp. japonica OsjCHS1(ID: XP_015618054.1), O. sativa subsp. japonica OsjCHS2(ID: XP_015646206.1), O. sativa subsp. indica OsiCHS1 (ID: A2ZEX7.1), Sorghum bicolor SbCHS1(ID: XP_002450874.1), S. bicolor SbCHS2(ID: XP_002450871.1), S. bicolor SbCHS3 (ID: XP_002450875.1), S. bicolor SbCHS4(ID: XP_002450870.1), S. bicolor SbCHS5(ID: XP_002449616.1), S. bicolor SbCHS6 (ID: XP_002450877.1), S. bicolor SbCHS7(ID: XP_002450876.1), Z. mays ZmCHS1 (ID: P24824.1), Z. mays ZmCHS2 (ID: NP_001142246.1). Arrows show active site residues, described for chalcone synthase (Cys 167, Phe 218, His 306 and Asn 339). N-terminal domain and Cterminal domain are shown.

Fig. 4 in Differential expression after UV-B radiation and characterization of chalcone synthase from the Patagonian hairgrass Deschampsia antarctica

Fig. 4. Lineal alignment and secondary structure comparison between DaCHS and the template (code 4YJY). Sequences have a high homology index (92% of sequence identity).

Fig. 3 in Differential expression after UV-B radiation and characterization of chalcone synthase from the Patagonian hairgrass Deschampsia antarctica

Fig. 3. Model of DaCHS structure. The 3D model structure of DaCHS shows 13 β sheets (yellow), 12 α helices (purple) and 8 α helices 310 (blue) and 23 loops. The center core is shown where catalytic residues are positioned. Enlargement of the active site shows the three catalytic residues (Cys 167, His 306 and Asn 339) and the two structural Phe residues (Phe 218, Phe 268). (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)

opencc-by-4.0Mar 2024View details →

Dataset from RNAseq analysis of differential gene expression among developmental stages of two non-marine ostracods

Dataset comprising tree files and alignments used for phylogenetic validation of data, assemblies of reference transcriptomes and draft genomes, annotation  of draft genomes, as well as supplementary tables.

opencc-by-4.0Sep 2023View details →

Supplementary figure collections 1–3 of 'Interspecies co‐expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis'

Supplementary figure collections 1–3 of 'Interspecies co‐expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis' (10.1111/tpj.16481)