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Figure 6 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 6. Hindlegs of adult Liviidae: A, Anomoterga africana (Loginova); B, Syntomoza magna (Kuwayama); C, Liella cf. insolita (Mifsud and Burckhardt); D, N, Paurocephala bifasciata Kuwayama; E, Psyllopsis fraxinicola (Foerster); F, Diclidophlebia oceanica (Crawford); G, D. excetrodendri (Li and Yang); H, D. xuani (Messi); I, Haplaphalara dahli (Rübsaamen); J, H. irvingiae (Burckhardt et al.); K, Klyveria setinervis (Burckhardt); L, Liella lanceomedia (Brown and Hodkinson); M, Melanastera lucens (Burckhardt et al.); O, Camarotoscena speciosa (Flor). A–D, metacoxa; E–N, metafemur, base left; O, apex of metafemur. Scales A–D = 0.2 mm; E–N = 0.1 mm; O = 0.05 mm.
Figure 8 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 8. Wings and abdomen of Liviinae: A, D, L, Aphorma lichenoides (Puton), male; M, A. lichenoides (Puton), female; B, Diclidophlebia excetrodendri (Li and Yang); C, G, Melanastera lucens (Burckhardt et al.); E, H, Livia junci (Schrank); F, J, Liella cf. insolita (Mifsud and Burckhardt); I, Diclidophlebia oceanica (Crawford); K, Tuthillia myrcianthis Burckhardt et al.; N, D. xuani (Messi); O, Paurocephala dayak Mifsud and Burckhardt, male; P, P.dayak, female. A, reduced pterostigma; B, pterostigma basally leathery, apically membranous (separating line see arrow); C, pterostigma entirely membranous; D–G, surface of forewing membrane in cell r 1: H–J, costa of hindwing; K–P, lateral edge of first visible abdominal tergite, base left. Scales A–C = 0.1 mm; D–G = 0.1 mm; H–J = 0.2 mm; K–P = 0.1 mm.
Figure 5 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 5. Mesosternum of adult Liviinae: A, Anomoterga scolopiae (Yang); B, Camarotoscena speciosa (Flor); C, Klyveria setinervis (Burckhardt); D, Livia junci (Schrank); E, Paurocephala robusta Mifsud and Burckhardt; F, Syntomoza magna (Kuwayama). Abbreviations: bas, basisternum; kat, katepisternum; pcx, precoxale; pss, pleurosternal suture; scs, sternocostal suture. Scales 0.1 mm.
Figure 7 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 7. Metatibial apex of adult Liviidae: A, Strophingia cinereae Hodkinson; B, Aphorma lichenoides (Puton); C, Camarotoscena speciosa (Flor); D, Livia junci (Schrank); E, Diclidophlebia oceanica (Crawford); F, D. xuani (Messi); G, Haplaphalara dahli (Rübsaamen); H, Liella lanceomedia (Brown and Hodkinson); I, Klyveria setinervis (Burckhardt); J, Melanastera lucens (Burckhardt et al.); K, M. maculipennis (Brown and Hodkinson); L, Paurocephala sauteri Enderlein. Abbreviations: a, anterior view, l, lateral view, m, medial, p, posterior view. Scales 0.05 mm.
Figure 1 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 1. Habitus images illustrating generic diversity within Liviinae: A, Anomoterga africana (Loginova); B, Aphorma lichenoides (Puton); C, Camarotoscena speciosa (Flor); D, Livia junci (Schrank); E, Syntomoza magna (Kuwayama); F, Diclidophlebia eastopi Vondráček; G, Haplaphalara dahli (Rübsaamen); H, Klyveria setinervis (Burckhardt); I, Liella cf. insolita (Mifsud and Burckhardt); J, Melanastera smithi (Burckhardt et al.); K, Paurocephala chonchaiensis Boselli; L, Woldaia nebulosa Brown and Hodkinson. Scales 1.0 mm.
Figure 4 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 4. Metapostnotum of adult Liviinae (arrow pointing to tubercle, tooth, ridge or horn): A, Anomoterga hsenpinensis Fang and Yang; B, Livia vernalis Fitch; C, Melanastera smithi (Burckhardt et al.); D, Paurocephala chonchaiensis Boselli. Scales 0.1 mm.
Figure 3 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 3. Head of adult Liviidae: A, Diclidophlebia xuani Messi; B, Syntomoza magna (Kuwayama); C, Anomoterga tahuata Klyver; D, Aphorma lichenoides (Puton); E, Camarotoscena speciosa (Flor); F, Livia junci (Schrank); G, Klyveria setinervis (Burckhardt); H, Paurocephala dayak Mifsud and Burckhardt. A, B, dorsal view; C–H, ventral view. Scales A, B = 0.1 mm; C–H = 0.1 mm.
Figure 11 in Phylogeny and classification of jumping plant lice of the subfamily Liviinae (Hemiptera: Psylloidea: Liviidae) based on molecular and morphological data
Figure 11. Phylogeny of the Liviidae showing strict consensus tree of the most parsimonious trees based on morphological data (character matrix in Supporting Information, File S2) and obtained with 'Traditional search' in TNT using equal weights. 'Unambiguous changes only' in WINCLADA was used to optimize the character states on the cladogram. Black circles represent synapomorphies, light circles homoplasies; numbers above circles refer to characters numbers, number below to the character states (Table 2). Host plants of Liviini: Malpigiales, Poa, Poales, Ran, Ranunculales; of Paurocephalini: representation of members of Malvales. Distribution: Afrotropics (Afr), Australasia (Aus), Indomalaya (Ind), Nearctic (Nea), Neotropics (Neo), Oceania (Oce), Palaearctic (Pal).
FIG. 8 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 8. Comparison of the branching patterns of molecular and combined-data trees produced with different methods. Each family recognized by Tyler et al. (2003) is a different color. Black lines indicate relationships with strong support; gray lines indicate weaker support. (A) Results from maximum likelihood analysis of molecular data. (B) Results from Bayesian inference analysis of molecular data. (C) Results from maximum likelihood analysis of combined morphological and molecular data, including three genera with morphological data only. (D) Results from Bayesian inference analysis of combined morphological and molecular data, including three genera with morphological data only.
FIG. 7 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 7. Combined (total-evidence) molecular and morphological phylogeny of the Zeiformes based on Bayesian inference (BI) using MrBayes v.3.1.2 (Huelsenbeck and Ronquist, 2001; Ronquist and Huelsenbeck, 2003). See Figure 6 for details of outgroup relationships, and see text for detailed methods and assumptions. The combined maximum likelihood (ML) analysis using Garli v2.0 (Zwickl, 2006) produced almost identical topology and very similar relative branch lengths. Taxa with asterisks (*) are of questionable or revised identification. Taxa with two asterisks (**) are those with morphological data only. Support values at nodes are from both analyses, with BI posterior probabilities above ML bootstrap percentages. Numbers after scientific names correspond to code numbers in Table 1. Thumbnail drawings of representative species by Michael Hanson.
FIG. 1 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 1. World map showing the collecting localities for specimens from which tissues were obtained for this study, along with the type locality for each species in the order. Specimen and type localities are most numerous in the western and southwestern Pacific, in the waters surrounding southern Africa, and on either side of the North Atlantic.
FIG. 4 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 4. Maximum parsimony (MP) phylogeny of Zeiformes based on morphological data analyzed in PAUP v.4b10 (Swofford, 2003). The data (Table 3) are a modified version of those used by Tyler and Santini (2005) but with revised outgroups reflecting zeiform membership in the Paracanthopterygii (e.g., Grande et al., 2013), and with character deletions, additions, and edits described in the text. The characters are listed in Appendix 1. This analysis is based on 27 terminal taxa and 105 characters, and resulted in a single shortest tree of 319 steps with CI 0.567. Support values at nodes are 1000-replicate bootstrap percentages/decay (Bremer) values. Character-state optimization was in MacClade 4.08 (Maddison and Maddison, 2005) using the ACCTRAN option as used also by Tyler et al. (2003) and Tyler and Santini (2005). Thumbnail drawings of representative species are original artwork by Michael Hanson.
FIG. 5 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 5. Comparison of branching patterns of morphological trees under maximum parsimony (MP) from three studies. Each family recognized by Tyler et al. (2003) is a different color. (A) Results from Tyler et al. (2003). (B) Results from Tyler and Santini (2005). (C) Results from the morphological analysis of the present study. Black lines in C indicate relationships with strong support; gray lines indicate weaker support. Note that the new tree resembles the previous trees but with the root moved to a position near Zeidae.
FIG. 2 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 2. Maximum likelihood (ML) phylogeny of the Zeiformes as reconstructed by Garli v2.0 (Zwickl, 2006), using sequence data for the eight molecular loci of Table 1, under the substitution models given in Table 2. Support values at nodes are bootstrap percentages. For details of the outgroup relationships see Figure 1S (see Data Accessibility). Asterisk (*) indicates sample originally cataloged as Cyttomimus affinis. Numbers after scientific names correspond to code numbers in Table 1.
FIG. 3 in Phylogenetic Relationships among Fishes in the Order Zeiformes Based on Molecular and Morphological Data
FIG. 3. Bayesian inference (BI) phylogeny of the Zeiformes as reconstructed by MrBayes v.3.1.2 (Huelsenbeck and Ronquist, 2001; Ronquist and Huelsenbeck, 2003), using sequence data for the eight molecular loci of Table 1, under the substitution models given in Table 2. Support values at nodes are posterior probabilities. For details of the outgroup relationships see Figure 2S (see Data Accessibility). Asterisk (*) indicates sample originally cataloged as Cyttomimus affinis. Numbers after scientific names correspond to code numbers in Table 1.
Molecular dynamics simulation data of the manuscript "KnowVolution of an efficient polyamidase through molecular dynamics simulations of incrementally docked oligomeric substrates"
<p>This repository provides the simulation data as well as the input and parameters files to reproduce our findings.</p> <p><strong>Acknowledgments</strong></p> <p>The authors gratefully acknowledge the computing time provided by RWTH Aachen University. Computations were performed with computing resources granted by RWTH Aachen University under project rwth1584.</p>
Supporting molecular genetic data for a publication on Juvenile Paget Disease
Open the record for dataset details and reuse information.
Fig. 4 in Phylogenetic relationships within the flatworm genus Matuxia (Platyhelminthes, Tricladida, Continenticola) inferred from molecular data with the description of a southern lineage of the genus
Fig. 4 Matuxia tymbyra Rossi & Leal-Zanchet, sp. nov., holotype, microphotographs of transverse (a–e, g) and sagittal (f; anterior tip to the left) sections: a anterior region of body; b detail of anterior region of body; c pre-pharyngeal region; d detail of dorsal surface of pre-pharyngeal region; e detail of ventral surface of pre- pharyngeal region; f pharynx; g ovary
Fig. 5 in Phylogenetic relationships within the flatworm genus Matuxia (Platyhelminthes, Tricladida, Continenticola) inferred from molecular data with the description of a southern lineage of the genus
Fig. 5 Matuxia tymbyra Rossi & Leal-Zanchet, sp. nov.: a sagittal composite reconstruction of copulatory apparatus of the holotype; b horizontal composite reconstruction of copulatory apparatus of specimen MZU PL.00166
Fig. 2 in Phylogenetic relationships within the flatworm genus Matuxia (Platyhelminthes, Tricladida, Continenticola) inferred from molecular data with the description of a southern lineage of the genus
Fig. 2 Molecular phylogenetic relationships and species boundaries inferred from the sequences of COI and EF-1a on a Bayesian consensus tree. Node values represent posterior probabilities and likelihood
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