Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Joint single-cell profiling resolves 5mC and 5hmC and reveals their distinct gene regulatory effects
GEO Series GSE236798. Mus musculus. 1479 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
T cell-mediated SIV dissemination into the CNS: a single-cell transcriptomic analysis
GEO Series GSE293543. Macaca mulatta; Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequecning of sorted human lung mast cells
GEO Series GSE227712. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of aortic allografts in mouse models
GEO Series GSE140812. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Improved bacterial single-cell RNA-seq through automated MATQ-seq [bulk RNA-seq]
GEO Series GSE218631. Salmonella enterica subsp. enterica serovar Typhimurium. 12 samples. Type: Expression profiling by high throughput sequencing.
A single-cell map of maternal and zygotic mRNA dynamics during cell-type specification in zebrafish embryos [SLAM-seq]
GEO Series GSE224113. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Scalable ultra-high-throughput single-cell chromatin and RNA sequencing reveals gene regulatory dynamics linking macrophage polarization to autoimmune disease [NIH-3T3_K562_RNA_with_blocking]
GEO Series GSE253163. Homo sapiens; Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment.
GEO Series GSE128855. Mus musculus. 35 samples. Type: Expression profiling by high throughput sequencing.
Single-cell sequencing of T cells harvested 4 hours after preparation by different methods
GEO Series GSE201035. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development
GEO Series GSE234971. Homo sapiens. 52 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single cell expression profiling of whole B16F10 melanoma tumors, treated with PBS or DCP-IL-12/FLT3L.
GEO Series GSE228014. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell human melanocytes
GEO Series GSE151091. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq analysis for mouse melanocyte stem cells and melanoma tumors
GEO Series GSE113502. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis uncovers novel populations of CD4+ T cells associated with antifungal vaccine efficacy
GEO Series GSE198466. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing analysis of CD8+ T cell subsets following DENV-vaccine administration
GEO Series GSE132950. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic comparison of young and aged choroid at the bulk and single-cell levels (single cells)
GEO Series GSE149100. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
10x Genomics single cell RNA-sequencing of sorted CD45+ Ly6G- CD11b+ F4/80+ tumour-associated macrophages from murine mammary tumours
GEO Series GSE160641. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of the epigenomic and transcriptional landscape of innate immunity to seasonal and adjuvanted pandemic influenza vaccination in humans (H5N1_scRNA-seq)
GEO Series GSE165903. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Analysis of Placenta Accreta Spectrum: Novel Contribution of Endothelial Cells to the Pathogenesis of Disease
GEO Series GSE212505. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors
GEO Series GSE229409. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.