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Ultrastructure of macromolecular assemblies contributing to bacterial spore resistance revealed by in situ cryo-electron tomography
<p>Cryo-electron tomograms reconstructed from data acquired on FIBM/SEM lamellae of <em>Bacillus subtilis</em> sporangia.</p> <p>Excel files containing measurements of various cellular ultrastructures observed by cryo-electron tomography and transmission electron microcopy of resin sections of B. subtilis sporangia.</p>
Fig. 3. Phosphaenus hemipterus. a in Contribution à la connaissance des lucioles et lampyres de Suisse et observation de Luciola lusitanica Charpentier, 1825 à Genève (Coleoptera, Lampyridae)
Fig. 3. Phosphaenus hemipterus. a) Répartition de l'espèce en Suisse (ronds noirs: données ≥ 2000, ronds blancs: données <2000); b) distribution altitudinale (pourcentage du nombre de données par tranche altitudinale de 200 m); c) période d'observation des adultes (pourcentage du nombre de données par période de deux semaines); d) larve (Lettonie); e) mâle imago (Fully, VS); f) femelle imago (Zürichberg, ZH). (Photos Marek Ievins (larve), Pierre Bornand (mâle) et Ulrich Kloter (femelle))
Fig. 1. Lampyris noctiluca. a in Contribution à la connaissance des lucioles et lampyres de Suisse et observation de Luciola lusitanica Charpentier, 1825 à Genève (Coleoptera, Lampyridae)
Fig. 1. Lampyris noctiluca. a) Répartition de l'espèce en Suisse (ronds noirs: données ≥ 2000, ronds blancs: données <2000); b) distribution altitudinale (pourcentage du nombre de données par tranche altitudinale de 200 m); c) période d'observation des adultes (pourcentage du nombre de données par période de deux semaines); d) larve (Vevey, VD); e) mâle imago (Russin, GE); f) femelle imago (France, Allèves, Haute-Savoie). (Photos Pierre Bornand (larve) et Kevin Gurcel (imagos))
Fig. 4. Luciola spp. a in Contribution à la connaissance des lucioles et lampyres de Suisse et observation de Luciola lusitanica Charpentier, 1825 à Genève (Coleoptera, Lampyridae)
Fig. 4. Luciola spp. a) Rèpartition actuelle de L. lusitanica (étoiles), L. italica (ronds) et de populations n'ayant pas pu être identifiées spécifiquement (?) (en noir: données ≥ 2000, en blanc: données <2000); les populations résultant d'introductions sont identifiées par un i; b) période d'observation cumulée pour les deux espèces (pourcentage du nombre de données par période de deux semaines); c) distribution altitudinale (pourcentage du nombre de données par tranche altitudinale de 200 m); d) mâle imago de L. italica (Parc Bourget, Lausanne, VD); e) mâle imago de L. lusitanica (Satigny, GE); f) femelle imago de L. lusitanica (Bernex, GE). (Photos Stève Breitenmoser (L. italica) et Kevin Gurcel (L. lusitanica))
Fig. 2. Lamprohiza splendidula. a in Contribution à la connaissance des lucioles et lampyres de Suisse et observation de Luciola lusitanica Charpentier, 1825 à Genève (Coleoptera, Lampyridae)
Fig. 2. Lamprohiza splendidula. a) Répartition de l'espèce en Suisse (ronds noirs: données ≥ 2000, ronds blancs: données <2000); une population résultant d'une probable introduction est identifiée par un i; b) distribution altitudinale (pourcentage du nombre de données par tranche altitudinale de 200 m); c) période d'observation des adultes (pourcentage du nombre de données par période de deux semaines); d) larve; e) imago mâle; f) imagos, mâle (à gauche) et femelle (à droite) (tous les spécimens sont de Schaffhouse, SH). (Photos Urs Weibel)
Fig. 5 in Contribution à la connaissance des lucioles et lampyres de Suisse et observation de Luciola lusitanica Charpentier, 1825 à Genève (Coleoptera, Lampyridae)
Fig. 5. Habitus de spécimens de L. italica (en haut): a) mâle de Yvonand (VD), b) femelle de Lugano (TI) et de L. lusitanica (en bas): c) mâle de Satigny (GE), d) femelle de Bernex (GE). (Photos Andreas Sanchez). A signaler que les spécimens anciens conservés à sec (spécimen b par exemple) présentent parfois des colorations qui diffèrent de celles des individus vivants.
Fig. 3. – Herbarium sheet with a in Caspar Bauhin's contribution to a historical herbarium stored in Bologna
Fig. 3. – Herbarium sheet with a specimen of Daphne mezereum L. (upper left) and the inscription: "Daphenoides Matth. / Camalea sive Melarada Tragi / Camelea germanica Dodonei / Mezereum germanicum Lobelli / Laurus pusilla eodem in iconibus".
Fig. 1. – Herbarium sheet with a in Caspar Bauhin's contribution to a historical herbarium stored in Bologna
Fig. 1. – Herbarium sheet with a specimen of Cerinthe major L. (in the middle) and the inscription: "Plumbago et Molibdena plini / Lepidium Antonius Petrisentis / Herba Santi Antoni / Romae Dentelaria / Rondoletii herba ad Dificultatem".
Analytic results on the massive three-loop form factors: quarkonic contributions
<p>This repository contains the ancillary files to the publication</p> <p>"Analytic results on the massive three-loop form factors: quarkonic contributions"</p> <p>J. Blümlein , A. De Freitas, P. Marquard , N. Rana, and C. Schneider</p>
Fig. 1 in A contribution to the fauna of weevil beetles (Coleoptera: Curculionoidea) of the Central Donbass
Fig. 1. Localities of collected weevils in the Central Donbass. 1–13 – Lugansk Region: 1 – Razdol'noe; 2 – Velikotsk; 3 – "Strel'tsovskaya steppe" Natural Reserve; 4 – Chervonaya Dibrova; 5 – Raygorodka; 6 – Trekhizbenka; 7 – "Pridontsovskaya poyma" Natural Reserve (until 2001 "Stanichno-Luganskiy"); 8 – Kondrashevskaya-Novaya railway station; 9 – Kolesnikovka; 10 – Lugansk; 11 – Khrustal'noe; 12 – Ivanovka; 13 – Proval'e and "Proval'skaya steppe" Natural Reserve. 14–87 – Donetsk Region: 14 – Svyatogorsk; 15 – Bogorodichnoe; 16 – Slavyansk, Teplinskiy forest; 17 – Prishib; 18 – Sidorovo; 19 – Cherkasskoe; 20 – Regional Landscape Park "Kramatorskiy"; 21 – Kramatorsk, Belen'koe; 22 – Mayaki; 23 – Drobyshevo; 24 – Shchurovo; 25 – Torskoe; 26 – Yampol; 27 – Il'ichevka; 28 – "Melovaya flora" Natural Reserve; 29 – Dronovka; 30 – Seversk; 31 – Tripol'e; 32 – Artemovsk; 33 – Kurdyumovka; 34 – Debal'tsevo; 35 – Aleksandrovka; 36 – Nikanorovka, Nikanorovskiy forest protected area; 37 – Belokuz'minovka; 38 – Belaya Gora; 39 – Regional Landscape Park "Kleban-Byk"; 40 – Novoocheretovatoe; 41 – Velikaya Novoselka; 42 – Vrem'evka; 43 – Ostroe; 44 – Mar'inka; 45 – Donetsk; 46 – Peski; 47 – Avdeevka; 48 – Yakovlevka; 49 – Mineral'noe; 50 – Yasinovataya; 51 – Vasil'evka; 52 – Mospino; 53 – Makeevka; 54 – Khartsyzsk; 55 – Enakievo; 56 – Ol'khovatka; 57 – Torez; 58 – Petrovskoe; 59 – Regional Landscape Park "Donetskiy kryazh", Saur-Mogila; 60 – Dmitrovka; 61 – Velikoanadol', Velikoanadol'skiy forest; 62 – Novoandreevka; 63 – Zlatoustovka; 64 – Oktyabr'skoe; 65 – Obil'noe; 66 – Starobeshevo; 67 – Novoekaterinovka; 68 – Novopetrovskoe; 69 – Rodniki; 70 – Blagodatnoe; 71 – Amvrosievka; 72 – Karpovo-Nadezhdinka; 73 – Beloyarovka; 74 – Granitnoe; 75 – Zernovoe; 76 – Svobodnoe; 77 – Nazarovka; 78 – "Kamennye mogily" Natural Reserve; 79 – Veseloe; 80 – Volodarskoe, "Azovskaya dacha" Forest Reserve; 81 – Belosarayskaya Spit, National Nature Park "Meotida"; 82 – Mariupol; 83 – Pishсhevik; 84 – "Khomutovskaya steppe" Natural Reserve; 85 – Klinkino; 86 – Novoazovsk; 87 – Sedovo, National Nature Park "Meotida". Рис. 1. МестонахожΔения ΔоΛгоносиков в ЦентраΛьном Àонбассе. 1–13 – Αуганская обΛасть: 1 – РазΔоΛьное; 2 – ВеΛикоцк; 3 – заповеΔник «СтреΛьцовская степь»; 4 – Червоная Àиброва; 5 – РайгороΔка; 6 – Трёхизбенка; 7 – заповеΔник «ПриΔонцовская пойма» (Δо 2001 гоΔа – «Станично-Αуганский»); 8 – жеΛезноΔорожная станция КонΔрашевская- Новая; 9 – КоΛесниковка; 10 – Αуганск; 11 – ХрустаΛьное; 12 – Ивановка; 13 – ПроваΛье и заповеΔник «ПроваΛьская степь». 14–87 – Àонецкая обΛасть: 14 – Святогорск; 15 – БогороΔичное; 16 – СΛавянск, ТепΛинский Λес; 17 – Пришиб; 18 – СиΔорово; 19 – Черкасское; 20 – регионаΛьный ΛанΔшафтный парк «Краматорский»; 21 – Краматорск, БеΛенькое; 22 – Маяки; 23 – Àробышево; 24 – Щурово; 25 – Торское; 26 – ЯмпоΛь; 27 – ИΛьичёвка; 28 – заповеΔник «МеΛовая фΛора»; 29 – Àроновка; 30 – Северск; 31 – ТрипоΛье; 32 – Артёмовск; 33 – КурΔюмовка; 34 – ÀебаΛьцево; 35 – АΛексанΔровка; 36 – Никаноровка, заповеΔное урочище Никаноровкий Λес; 37 – БеΛокузьминовка; 38 – БеΛая Гора; 39 – регионаΛьный ΛанΔшафтный парк «КΛебан-Бык»; 40 – Новоочеретоватое; 41 – ВеΛикая НовосёΛка; 42 – Времьевка; 43 – Острое; 44 – Марьинка; 45 – Àонецк; 46 – Пески; 47 – АвΔеевка; 48 – ЯковΛевка; 49 – МинераΛьное; 50 – Ясиноватая; 51 – ВасиΛьевка; 52 – Моспино; 53 – Макеевка; 54 – Харцызск; 55 – Енакиево; 56 – ОΛьховатка; 57 – Торез; 58 – Петровское; 59 – регионаΛьный ΛанΔшафтный парк «Àонецкий кряж», Саур-МогиΛа; 60 – Àмитровка; 61 – ВеΛикоанаΔоΛь, ВеΛикоанаΔоΛьский Λес; 62 – НовоанΔреевка; 63 – ЗΛатоустовка; 64 – Октябрское; 65 – ОбиΛьное; 66 – Старобешево; 67 – Новоекатериновка; 68 – Новопетровское; 69 – РоΔники; 70 – БΛагоΔатное; 71 – Амвросиевка; 72 – Карпово-НаΔежΔинка; 73 – БеΛояровка; 74 – Гранитное; 75 – Зерновое; 76 – СвобоΔное; 77 – Назаровка; 78 – заповеΔник «Каменные могиΛы»; 79 – ВесёΛое; 80 – ВоΛоΔарское, Λесничество «Азовская Δача»; 81 – БеΛосарайская Коса, национаΛьный прироΔный парк «МеотиΔа»; 82 – МариупоΛь; 83 – Пищевик; 84 – заповеΔник «Хомутовская степь»; 85 – КΛинкино; 86 – Новоазовск; 87 – СеΔово, национаΛьный прироΔный парк «МеотиΔа».
Figure 2. Ixodes ricinus A in A contribution to the tick (Acari: Ixodidae) fauna of Turkey: The first record of Ixodes inopinatus Estrada-Peña, Nava & Petney
Figure 2. Ixodes ricinus A. Dorsal view of male, B. Several rows of setae in the lateral margin of the conscutum of male, C. Internal spurs of coxa I of female, D. Spiracular plate with concentric five rows goblets of female.
Figures 2-3 in Contributions to the Zerconidae (Acari: Mesostigmata) fauna of Dilek Peninsula-Büyük Menderes Delta National Park, Türkiye
Figures 2-3. Dorsal views of deutonymph specimens 2. Zercon andrei, 3. Zercon plumatopilus. Scale bar 100.
Figures 8-9 in Contributions to the Zerconidae (Acari: Mesostigmata) fauna of Dilek Peninsula-Büyük Menderes Delta National Park, Türkiye
Figures 8-9. Dorsal views of immature stages of Zercon dilekensis sp. nov. 8. Deutonymph, 9. Protonymph. Scale bar 100.
Figure 5 in Contribution to the water mite (Acari, Hydrachnidia) fauna of Turkey
Figure 5. Nilotonia (Dartonia) rizeensis, deutonymph: A. Idiosoma, dorsal view, B. Idiosoma, ventral view, C. Palp medial view, D. Palp, lateral view, E. IV-L-6; Female: F. Palp, medial view, G. IV-L-6 (Scale bars = 100 µm).
Figure 4. Parathyas colligera, A in Contribution to the water mite (Acari, Hydrachnidia) fauna of Turkey
Figure 4. Parathyas colligera, A. Frontal area of male, B-C. Frontal area of female (arrows indicate prefrontale variability in females).
Figure 2 in Contribution to the water mite (Acari, Hydrachnidia) fauna of Turkey
Figure 2. Parathyas colligera, male: A. Idiosoma, dorsal view, B. Genital field, C. Excretory pore (Scale bars = 100 µm).
Multiple mechanisms contribute to isolation-by-environment in the redheaded pine sawfly, Neodiprion lecontei
<p class="NormalThesis"><span>Isolation by environment (IBE) is a population genomic pattern that arises when ecological barriers reduce gene flow between populations. Although current evidence suggests IBE is common in nature, few studies have evaluated the underlying mechanisms that generate IBE patterns. In this study, we evaluate five proposed mechanisms of IBE (natural selection against immigrants, sexual selection against immigrants, selection against hybrids, biased dispersal, environment-based phenological differences) that may give rise to host-associated differentiation within a sympatric population of the redheaded pine sawfly, <em>Neodiprion lecontei</em>, a species for which IBE has previously been detected. We first characterize the three pine species used by <em>N. lecontei</em> at the site, finding morphological and chemical differences among the hosts that could generate divergent selection on sawfly host-use traits. Next, using morphometrics and ddRAD sequencing, we detect modest phenotypic and genetic differentiation among sawflies originating from different pines that is consistent with recent, <em>in situ</em> divergence. Finally, via a series of laboratory assays – including assessments of larval performance on different hosts, adult mate and host preferences, hybrid fitness, and adult eclosion timing – we find evidence that multiple mechanisms contribute to IBE in <em>N. lecontei</em>. Overall, our results suggest IBE can emerge quickly, possibly due to multiple mechanisms acting in concert to reduce migration between different environments.</span></p>
Contribution of the Altyn Tagh Fault to tectonic deformation within the Qilian Shan, northern Tibetan Plateau: Implications from the electrical anisotropic structure
<p>The dataset contains five folders. They are ‘MT’, ‘aniinv’, ‘isoinv’, ‘sensitivity_test’, ‘syn_mod_test’, respectively. The ‘MT’ folder includes the observed impedances for each MT site. In the ‘aniinv’ folder, there are three sub-folders include ‘azimu_ani_inv’, ‘gener_ani_inv’, ‘verti_ani_inv’, indicating the inversion results for azimuthal, general, and vertical anisotropic inversions, respectively. The ‘isoinv’ folder contains results for isotropic inversion. The ‘sensitivity_test’ folder contains modified models and their responses for sensitivity tests of anomalies. The ‘syn_mod_test’ folder contains a synthetic model constructed according the final model, the responses of this model, and the recovering for this model. In each folder, there is a ‘readme.txt’ file describing the details of individual files.</p> <p>The 'Software Availability.txt' file illustrates that the software used in 3D anisotropic inversion is available to academic community.</p>
Factors contributing to deep slab dip angles in reconstructions of past mantle flow
<p>This repository contains data files for the manuscript 'Factors contributing to deep slab dip angles in reconstructions of past mantle flow' submitted to Earth-Science Reviews by J. Weber and N. Flament</p> <p>The provided data are vote maps of global tomographic models and global temperature anomalies for case C10.</p> <p>The directory 'pswave_votemap' contains vote maps of 33 global P- and S-wave tomographic models at 32 selected depths between 0 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'pswave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7.</p> <p>The directory 'pwave_votemap' contains vote maps of 15 global P-wave tomographic models at 32 selected depths between 0 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'pwave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7.</p> <p>The directory 'swave_votemap' contains vote maps of 18 global S-wave tomographic models at 11 selected depths between 396 km and 1040 km (depths were selected to match that available for global mantle flow models). The name convention is 'swave_votemap_$depth.nc' and the file format is NetCDF CF Convention 1.7.</p> <p>The directory 'C10' contains the present-day temperature anomalies predicted for case C10 at 32 depths between 396 km and 1040 km. The name convention is 'C10_dimensional_temperature_anomaly_$depth.nc' or 'C10_non_dimensional_temperature_anomaly_$depth.nc' and the file format is NetCDF CF Convention 1.7. Dimensional temperature anomalies were obtained by multiplying non-dimensional temperature anomalies by 3100.</p> <p>These files were created using version 6 of the Generic Mapping Tools (GMT6; Wessel et al., 2019).</p> <p>Please contact nflament@uow.edu.au if you have questions about these files, or require further materials.</p>
Predicting the Relative Static Permittivity: a Group Contribution Method Based on Perturbation Theory
<p>Permittivity-over-temperature diagram for the publication "Predicting the Relative Static Permittivity: a Group Contribution Method Based on Perturbation Theory" published under DOI 10.1021/acs.jced.3c00323 in the Journal of Chemical and Engineering Data.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.